ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A1068:A1206

Extra

PDB:
ATOM 1 O3' G A1067 13.071 104.795 127.393 1.00 46.99 O
ATOM 2 P U A1068 11.909 105.816 127.825 1.00 49.26 P
ATOM 3 OP1 U A1068 10.708 105.009 128.138 1.00 46.77 O
ATOM 4 OP2 U A1068 11.801 106.975 126.898 1.00 48.32 O
ATOM 5 O5' U A1068 12.452 106.355 129.213 1.00 49.74 O
ATOM 6 C5' U A1068 13.585 107.224 129.261 1.00 48.75 C
ATOM 7 C4' U A1068 14.718 106.545 129.974 1.00 48.00 C
ATOM 8 O4' U A1068 15.906 107.364 129.860 1.00 48.11 O
ATOM 9 C3' U A1068 14.517 106.297 131.460 1.00 46.90 C
ATOM 10 O3' U A1068 15.219 105.125 131.820 1.00 46.91 O
ATOM 11 C2' U A1068 15.260 107.463 132.084 1.00 47.04 C
ATOM 12 O2' U A1068 15.724 107.165 133.382 1.00 48.77 O
ATOM 13 C1' U A1068 16.447 107.562 131.139 1.00 47.89 C
ATOM 14 N1 U A1068 17.168 108.836 131.148 1.00 47.99 N
ATOM 15 C2 U A1068 18.500 108.813 131.508 1.00 47.45 C
ATOM 16 O2 U A1068 19.084 107.795 131.871 1.00 47.36 O
ATOM 17 N3 U A1068 19.127 110.026 131.436 1.00 46.40 N
ATOM 18 C4 U A1068 18.568 111.227 131.077 1.00 47.36 C
ATOM 19 O4 U A1068 19.263 112.235 131.067 1.00 48.25 O
ATOM 20 C5 U A1068 17.188 111.171 130.750 1.00 48.74 C
ATOM 21 C6 U A1068 16.548 110.007 130.791 1.00 49.35 C
ATOM 22 P G A1069 14.501 104.027 132.722 1.00 46.73 P
ATOM 23 OP1 G A1069 13.652 104.788 133.677 1.00 47.36 O
ATOM 24 OP2 G A1069 15.517 103.083 133.240 1.00 46.65 O
ATOM 25 O5' G A1069 13.551 103.270 131.694 1.00 45.57 O
TER

ATOM 1 O3' A B1205 22.454 104.346 133.786 1.00 41.73 O
ATOM 2 P A B1206 21.043 104.521 133.062 1.00 41.02 P
ATOM 3 OP1 A B1206 20.448 105.691 133.743 1.00 41.74 O
ATOM 4 OP2 A B1206 20.259 103.259 132.969 1.00 38.81 O
ATOM 5 O5' A B1206 21.470 104.952 131.589 1.00 38.49 O
ATOM 6 C5' A B1206 21.982 103.992 130.643 1.00 35.94 C
ATOM 7 C4' A B1206 23.276 104.485 130.050 1.00 36.03 C
ATOM 8 O4' A B1206 23.086 105.858 129.620 1.00 36.87 O
ATOM 9 C3' A B1206 24.476 104.507 130.989 1.00 35.66 C
ATOM 10 O3' A B1206 25.631 104.331 130.183 1.00 36.53 O
ATOM 11 C2' A B1206 24.464 105.938 131.509 1.00 36.43 C
ATOM 12 O2' A B1206 25.722 106.426 131.919 1.00 34.62 O
ATOM 13 C1' A B1206 24.030 106.689 130.259 1.00 36.32 C
ATOM 14 N9 A B1206 23.399 107.967 130.574 1.00 37.85 N
ATOM 15 C8 A B1206 22.140 108.214 131.065 1.00 37.27 C
ATOM 16 N7 A B1206 21.881 109.485 131.227 1.00 35.61 N
ATOM 17 C5 A B1206 23.048 110.116 130.822 1.00 35.77 C
ATOM 18 C6 A B1206 23.420 111.466 130.752 1.00 36.15 C
ATOM 19 N6 A B1206 22.618 112.476 131.096 1.00 35.93 N
ATOM 20 N1 A B1206 24.667 111.753 130.308 1.00 35.65 N
ATOM 21 C2 A B1206 25.473 110.744 129.964 1.00 35.37 C
ATOM 22 N3 A B1206 25.235 109.441 129.986 1.00 37.29 N
ATOM 23 C4 A B1206 23.990 109.193 130.427 1.00 36.69 C
ATOM 24 P A B1207 26.116 102.862 129.788 1.00 36.18 P
ATOM 25 OP1 A B1207 26.467 102.889 128.357 1.00 34.80 O
ATOM 26 OP2 A B1207 25.114 101.891 130.278 1.00 36.31 O
ATOM 27 O5' A B1207 27.459 102.685 130.619 1.00 38.60 O
TER

Atoms:
C4: (18.568,111.227,131.077)
N3: (19.127,110.026,131.436)
OP1: (10.708,105.009,128.138)
OP2: (11.801,106.975,126.898)
C2: (18.500,108.813,131.508)
C1': (16.447,107.562,131.139)
C3': (14.517,106.297,131.460)
O5': (12.452,106.355,129.213)
O4': (15.906,107.364,129.860)
C5': (13.585,107.224,129.261)
P: (11.909,105.816,127.825)
C4': (14.718,106.545,129.974)
C2': (15.260,107.463,132.084)
O2': (15.724,107.165,133.382)
N1: (17.168,108.836,131.148)
O4: (19.263,112.235,131.067)
O2: (19.084,107.795,131.871)
C6: (16.548,110.007,130.791)
C5: (17.188,111.171,130.750)
O3': (15.219,105.125,131.820)
OP1: (20.448,105.691,133.743)
OP2: (20.259,103.259,132.969)
C3': (24.476,104.507,130.989)
C1': (24.030,106.689,130.259)
C5': (21.982,103.992,130.643)
O4': (23.086,105.858,129.620)
C8: (22.140,108.214,131.065)
O2': (25.722,106.426,131.919)
C6: (23.420,111.466,130.752)
C5: (23.048,110.116,130.822)
C4: (23.990,109.193,130.427)
P: (21.043,104.521,133.062)
C4': (23.276,104.485,130.050)
C2': (24.464,105.938,131.509)
C2: (25.473,110.744,129.964)
N1: (24.667,111.753,130.308)
N3: (25.235,109.441,129.986)
N6: (22.618,112.476,131.096)
N7: (21.881,109.485,131.227)
N9: (23.399,107.967,130.574)
O5': (21.470,104.952,131.589)
O3': (25.631,104.331,130.183)
Image (generated by PyMOL):
PyMOL image
show in jmol