Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12667:12688
Extra
PDB:
ATOM 1 O3' G A2666 13.568 31.042 40.543 1.00 47.28 O
ATOM 2 P U A2667 13.762 30.305 41.903 1.00 43.12 P
ATOM 3 OP1 U A2667 13.299 31.206 42.966 1.00 43.26 O
ATOM 4 OP2 U A2667 15.148 29.807 41.943 1.00 42.77 O
ATOM 5 O5' U A2667 12.764 29.101 41.745 1.00 43.02 O
ATOM 6 C5' U A2667 11.383 29.339 41.547 1.00 43.34 C
ATOM 7 C4' U A2667 10.673 28.112 41.061 1.00 43.26 C
ATOM 8 O4' U A2667 11.098 27.772 39.722 1.00 43.33 O
ATOM 9 C3' U A2667 10.905 26.859 41.863 1.00 42.80 C
ATOM 10 O3' U A2667 10.151 26.872 43.073 1.00 42.74 O
ATOM 11 C2' U A2667 10.516 25.778 40.861 1.00 42.79 C
ATOM 12 O2' U A2667 9.119 25.615 40.814 1.00 43.01 O
ATOM 13 C1' U A2667 10.967 26.398 39.530 1.00 43.07 C
ATOM 14 N1 U A2667 12.266 25.861 39.090 1.00 42.81 N
ATOM 15 C2 U A2667 12.240 24.647 38.411 1.00 42.67 C
ATOM 16 O2 U A2667 11.204 24.080 38.155 1.00 42.78 O
ATOM 17 N3 U A2667 13.443 24.138 38.015 1.00 42.44 N
ATOM 18 C4 U A2667 14.656 24.706 38.318 1.00 42.30 C
ATOM 19 O4 U A2667 15.647 24.121 37.935 1.00 42.09 O
ATOM 20 C5 U A2667 14.654 25.926 39.041 1.00 42.44 C
ATOM 21 C6 U A2667 13.479 26.459 39.386 1.00 42.68 C
ATOM 22 P U A2668 10.375 25.822 44.276 1.00 48.10 P
ATOM 23 OP1 U A2668 11.750 25.355 44.222 1.00 47.77 O
ATOM 24 OP2 U A2668 9.278 24.823 44.173 1.00 48.09 O
ATOM 25 O5' U A2668 10.158 26.743 45.569 1.00 48.16 O
TER
ATOM 1 O3' U B2687 6.246 22.336 40.654 1.00 48.46 O
ATOM 2 P A B2688 6.515 20.954 39.918 1.00 44.31 P
ATOM 3 OP1 A B2688 5.304 20.594 39.154 1.00 44.61 O
ATOM 4 OP2 A B2688 7.025 20.004 40.930 1.00 43.85 O
ATOM 5 O5' A B2688 7.639 21.396 38.912 1.00 44.36 O
ATOM 6 C5' A B2688 8.911 20.902 38.985 1.00 44.01 C
ATOM 7 C4' A B2688 9.052 19.780 38.055 1.00 43.95 C
ATOM 8 O4' A B2688 9.538 20.250 36.770 1.00 44.19 O
ATOM 9 C3' A B2688 10.044 18.777 38.513 1.00 43.51 C
ATOM 10 O3' A B2688 9.480 17.884 39.449 1.00 43.28 O
ATOM 11 C2' A B2688 10.528 18.156 37.227 1.00 43.55 C
ATOM 12 O2' A B2688 9.565 17.246 36.756 1.00 43.67 O
ATOM 13 C1' A B2688 10.542 19.391 36.301 1.00 43.95 C
ATOM 14 N9 A B2688 11.834 20.126 36.362 1.00 43.84 N
ATOM 15 C8 A B2688 12.039 21.409 36.803 1.00 43.96 C
ATOM 16 N7 A B2688 13.267 21.813 36.796 1.00 43.83 N
ATOM 17 C5 A B2688 13.943 20.715 36.313 1.00 43.61 C
ATOM 18 C6 A B2688 15.292 20.479 36.048 1.00 43.40 C
ATOM 19 N6 A B2688 16.265 21.338 36.234 1.00 43.37 N
ATOM 20 N1 A B2688 15.644 19.296 35.574 1.00 43.23 N
ATOM 21 C2 A B2688 14.699 18.389 35.363 1.00 43.26 C
ATOM 22 N3 A B2688 13.392 18.470 35.567 1.00 43.45 N
ATOM 23 C4 A B2688 13.076 19.681 36.041 1.00 43.61 C
ATOM 24 P G B2689 10.130 17.772 40.915 1.00 44.08 P
ATOM 25 OP1 G B2689 9.035 17.715 41.894 1.00 44.10 O
ATOM 26 OP2 G B2689 11.157 18.855 41.046 1.00 44.06 O
ATOM 27 O5' G B2689 10.850 16.371 40.812 1.00 43.74 O
TER
ATOM 2 P U A2667 13.762 30.305 41.903 1.00 43.12 P
ATOM 3 OP1 U A2667 13.299 31.206 42.966 1.00 43.26 O
ATOM 4 OP2 U A2667 15.148 29.807 41.943 1.00 42.77 O
ATOM 5 O5' U A2667 12.764 29.101 41.745 1.00 43.02 O
ATOM 6 C5' U A2667 11.383 29.339 41.547 1.00 43.34 C
ATOM 7 C4' U A2667 10.673 28.112 41.061 1.00 43.26 C
ATOM 8 O4' U A2667 11.098 27.772 39.722 1.00 43.33 O
ATOM 9 C3' U A2667 10.905 26.859 41.863 1.00 42.80 C
ATOM 10 O3' U A2667 10.151 26.872 43.073 1.00 42.74 O
ATOM 11 C2' U A2667 10.516 25.778 40.861 1.00 42.79 C
ATOM 12 O2' U A2667 9.119 25.615 40.814 1.00 43.01 O
ATOM 13 C1' U A2667 10.967 26.398 39.530 1.00 43.07 C
ATOM 14 N1 U A2667 12.266 25.861 39.090 1.00 42.81 N
ATOM 15 C2 U A2667 12.240 24.647 38.411 1.00 42.67 C
ATOM 16 O2 U A2667 11.204 24.080 38.155 1.00 42.78 O
ATOM 17 N3 U A2667 13.443 24.138 38.015 1.00 42.44 N
ATOM 18 C4 U A2667 14.656 24.706 38.318 1.00 42.30 C
ATOM 19 O4 U A2667 15.647 24.121 37.935 1.00 42.09 O
ATOM 20 C5 U A2667 14.654 25.926 39.041 1.00 42.44 C
ATOM 21 C6 U A2667 13.479 26.459 39.386 1.00 42.68 C
ATOM 22 P U A2668 10.375 25.822 44.276 1.00 48.10 P
ATOM 23 OP1 U A2668 11.750 25.355 44.222 1.00 47.77 O
ATOM 24 OP2 U A2668 9.278 24.823 44.173 1.00 48.09 O
ATOM 25 O5' U A2668 10.158 26.743 45.569 1.00 48.16 O
TER
ATOM 1 O3' U B2687 6.246 22.336 40.654 1.00 48.46 O
ATOM 2 P A B2688 6.515 20.954 39.918 1.00 44.31 P
ATOM 3 OP1 A B2688 5.304 20.594 39.154 1.00 44.61 O
ATOM 4 OP2 A B2688 7.025 20.004 40.930 1.00 43.85 O
ATOM 5 O5' A B2688 7.639 21.396 38.912 1.00 44.36 O
ATOM 6 C5' A B2688 8.911 20.902 38.985 1.00 44.01 C
ATOM 7 C4' A B2688 9.052 19.780 38.055 1.00 43.95 C
ATOM 8 O4' A B2688 9.538 20.250 36.770 1.00 44.19 O
ATOM 9 C3' A B2688 10.044 18.777 38.513 1.00 43.51 C
ATOM 10 O3' A B2688 9.480 17.884 39.449 1.00 43.28 O
ATOM 11 C2' A B2688 10.528 18.156 37.227 1.00 43.55 C
ATOM 12 O2' A B2688 9.565 17.246 36.756 1.00 43.67 O
ATOM 13 C1' A B2688 10.542 19.391 36.301 1.00 43.95 C
ATOM 14 N9 A B2688 11.834 20.126 36.362 1.00 43.84 N
ATOM 15 C8 A B2688 12.039 21.409 36.803 1.00 43.96 C
ATOM 16 N7 A B2688 13.267 21.813 36.796 1.00 43.83 N
ATOM 17 C5 A B2688 13.943 20.715 36.313 1.00 43.61 C
ATOM 18 C6 A B2688 15.292 20.479 36.048 1.00 43.40 C
ATOM 19 N6 A B2688 16.265 21.338 36.234 1.00 43.37 N
ATOM 20 N1 A B2688 15.644 19.296 35.574 1.00 43.23 N
ATOM 21 C2 A B2688 14.699 18.389 35.363 1.00 43.26 C
ATOM 22 N3 A B2688 13.392 18.470 35.567 1.00 43.45 N
ATOM 23 C4 A B2688 13.076 19.681 36.041 1.00 43.61 C
ATOM 24 P G B2689 10.130 17.772 40.915 1.00 44.08 P
ATOM 25 OP1 G B2689 9.035 17.715 41.894 1.00 44.10 O
ATOM 26 OP2 G B2689 11.157 18.855 41.046 1.00 44.06 O
ATOM 27 O5' G B2689 10.850 16.371 40.812 1.00 43.74 O
TER
Atoms:
C4: (14.656,24.706,38.318)
N3: (13.443,24.138,38.015)
OP1: (13.299,31.206,42.966)
OP2: (15.148,29.807,41.943)
C2: (12.240,24.647,38.411)
C1': (10.967,26.398,39.530)
C3': (10.905,26.859,41.863)
O5': (12.764,29.101,41.745)
O4': (11.098,27.772,39.722)
C5': (11.383,29.339,41.547)
P: (13.762,30.305,41.903)
C4': (10.673,28.112,41.061)
C2': (10.516,25.778,40.861)
O2': (9.119,25.615,40.814)
N1: (12.266,25.861,39.090)
O4: (15.647,24.121,37.935)
O2: (11.204,24.080,38.155)
C6: (13.479,26.459,39.386)
C5: (14.654,25.926,39.041)
O3': (10.151,26.872,43.073)
N3: (13.443,24.138,38.015)
OP1: (13.299,31.206,42.966)
OP2: (15.148,29.807,41.943)
C2: (12.240,24.647,38.411)
C1': (10.967,26.398,39.530)
C3': (10.905,26.859,41.863)
O5': (12.764,29.101,41.745)
O4': (11.098,27.772,39.722)
C5': (11.383,29.339,41.547)
P: (13.762,30.305,41.903)
C4': (10.673,28.112,41.061)
C2': (10.516,25.778,40.861)
O2': (9.119,25.615,40.814)
N1: (12.266,25.861,39.090)
O4: (15.647,24.121,37.935)
O2: (11.204,24.080,38.155)
C6: (13.479,26.459,39.386)
C5: (14.654,25.926,39.041)
O3': (10.151,26.872,43.073)
OP1: (5.304,20.594,39.154)
OP2: (7.025,20.004,40.930)
C3': (10.044,18.777,38.513)
C1': (10.542,19.391,36.301)
C5': (8.911,20.902,38.985)
O4': (9.538,20.250,36.770)
C8: (12.039,21.409,36.803)
O2': (9.565,17.246,36.756)
C6: (15.292,20.479,36.048)
C5: (13.943,20.715,36.313)
C4: (13.076,19.681,36.041)
P: (6.515,20.954,39.918)
C4': (9.052,19.780,38.055)
C2': (10.528,18.156,37.227)
C2: (14.699,18.389,35.363)
N1: (15.644,19.296,35.574)
N3: (13.392,18.470,35.567)
N6: (16.265,21.338,36.234)
N7: (13.267,21.813,36.796)
N9: (11.834,20.126,36.362)
O5': (7.639,21.396,38.912)
O3': (9.480,17.884,39.449)
OP2: (7.025,20.004,40.930)
C3': (10.044,18.777,38.513)
C1': (10.542,19.391,36.301)
C5': (8.911,20.902,38.985)
O4': (9.538,20.250,36.770)
C8: (12.039,21.409,36.803)
O2': (9.565,17.246,36.756)
C6: (15.292,20.479,36.048)
C5: (13.943,20.715,36.313)
C4: (13.076,19.681,36.041)
P: (6.515,20.954,39.918)
C4': (9.052,19.780,38.055)
C2': (10.528,18.156,37.227)
C2: (14.699,18.389,35.363)
N1: (15.644,19.296,35.574)
N3: (13.392,18.470,35.567)
N6: (16.265,21.338,36.234)
N7: (13.267,21.813,36.796)
N9: (11.834,20.126,36.362)
O5': (7.639,21.396,38.912)
O3': (9.480,17.884,39.449)
Image (generated by PyMOL):