ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A419:A421

Extra

PDB:
ATOM 1 O3' G A 418 -113.460 41.484 -69.144 1.00 49.95 O
ATOM 2 P U A 419 -113.975 42.593 -70.201 1.00 33.69 P
ATOM 3 OP1 U A 419 -112.939 43.644 -70.120 1.00 36.67 O
ATOM 4 OP2 U A 419 -115.386 42.949 -69.937 1.00 37.09 O
ATOM 5 O5' U A 419 -113.848 41.901 -71.630 1.00 26.44 O
ATOM 6 C5' U A 419 -113.177 42.567 -72.709 1.00 24.86 C
ATOM 7 C4' U A 419 -112.808 41.583 -73.789 1.00 23.87 C
ATOM 8 O4' U A 419 -114.018 41.022 -74.377 1.00 23.66 O
ATOM 9 C3' U A 419 -112.005 42.182 -74.949 1.00 23.85 C
ATOM 10 O3' U A 419 -110.990 41.287 -75.399 1.00 23.65 O
ATOM 11 C2' U A 419 -113.048 42.306 -76.064 1.00 23.69 C
ATOM 12 O2' U A 419 -112.534 42.225 -77.379 1.00 23.25 O
ATOM 13 C1' U A 419 -113.918 41.091 -75.780 1.00 24.62 C
ATOM 14 N1 U A 419 -115.258 41.112 -76.374 1.00 19.21 N
ATOM 15 C2 U A 419 -115.673 39.966 -77.027 1.00 19.71 C
ATOM 16 O2 U A 419 -114.976 38.973 -77.134 1.00 19.09 O
ATOM 17 N3 U A 419 -116.932 40.022 -77.557 1.00 20.19 N
ATOM 18 C4 U A 419 -117.792 41.080 -77.513 1.00 20.72 C
ATOM 19 O4 U A 419 -118.919 40.958 -77.984 1.00 21.43 O
ATOM 20 C5 U A 419 -117.283 42.232 -76.842 1.00 20.97 C
ATOM 21 C6 U A 419 -116.066 42.206 -76.301 1.00 20.23 C
ATOM 22 P A A 420 -110.004 40.586 -74.343 1.00 18.49 P
ATOM 23 OP1 A A 420 -109.865 41.452 -73.136 1.00 48.08 O
ATOM 24 OP2 A A 420 -108.792 40.159 -75.089 1.00 46.86 O
ATOM 25 O5' A A 420 -110.821 39.281 -73.939 1.00 69.27 O
TER

ATOM 1 O3' A B 420 -111.785 35.641 -76.208 1.00 70.26 O
ATOM 2 P A B 421 -112.076 35.331 -77.755 1.00 45.24 P
ATOM 3 OP1 A B 421 -111.104 34.285 -78.161 1.00 66.09 O
ATOM 4 OP2 A B 421 -112.137 36.605 -78.510 1.00 65.49 O
ATOM 5 O5' A B 421 -113.534 34.687 -77.721 1.00 10.25 O
ATOM 6 C5' A B 421 -113.771 33.514 -76.932 1.00 13.63 C
ATOM 7 C4' A B 421 -115.195 33.055 -77.063 1.00 16.56 C
ATOM 8 O4' A B 421 -116.103 33.979 -76.423 1.00 18.47 O
ATOM 9 C3' A B 421 -115.746 32.931 -78.468 1.00 17.37 C
ATOM 10 O3' A B 421 -115.305 31.721 -79.066 1.00 17.78 O
ATOM 11 C2' A B 421 -117.252 32.918 -78.224 1.00 17.83 C
ATOM 12 O2' A B 421 -117.748 31.618 -77.957 1.00 17.41 O
ATOM 13 C1' A B 421 -117.394 33.783 -76.960 1.00 18.56 C
ATOM 14 N9 A B 421 -118.034 35.080 -77.195 1.00 40.07 N
ATOM 15 C8 A B 421 -117.480 36.334 -77.269 1.00 40.34 C
ATOM 16 N7 A B 421 -118.347 37.277 -77.554 1.00 40.53 N
ATOM 17 C5 A B 421 -119.553 36.600 -77.662 1.00 40.73 C
ATOM 18 C6 A B 421 -120.861 37.027 -77.958 1.00 40.68 C
ATOM 19 N6 A B 421 -121.193 38.291 -78.228 1.00 40.84 N
ATOM 20 N1 A B 421 -121.834 36.098 -77.975 1.00 40.83 N
ATOM 21 C2 A B 421 -121.508 34.830 -77.719 1.00 41.40 C
ATOM 22 N3 A B 421 -120.323 34.305 -77.437 1.00 41.05 N
ATOM 23 C4 A B 421 -119.377 35.253 -77.425 1.00 40.67 C
ATOM 24 P A B 422 -115.121 31.640 -80.660 1.00 69.38 P
ATOM 25 OP1 A B 422 -114.688 30.254 -80.999 1.00 61.55 O
ATOM 26 OP2 A B 422 -114.295 32.795 -81.103 1.00 61.41 O
ATOM 27 O5' A B 422 -116.615 31.812 -81.176 1.00 32.81 O
TER

Atoms:
C4: (-117.792,41.080,-77.513)
N3: (-116.932,40.022,-77.557)
OP1: (-112.939,43.644,-70.120)
OP2: (-115.386,42.949,-69.937)
C2: (-115.673,39.966,-77.027)
C1': (-113.918,41.091,-75.780)
C3': (-112.005,42.182,-74.949)
O5': (-113.848,41.901,-71.630)
O4': (-114.018,41.022,-74.377)
C5': (-113.177,42.567,-72.709)
P: (-113.975,42.593,-70.201)
C4': (-112.808,41.583,-73.789)
C2': (-113.048,42.306,-76.064)
O2': (-112.534,42.225,-77.379)
N1: (-115.258,41.112,-76.374)
O4: (-118.919,40.958,-77.984)
O2: (-114.976,38.973,-77.134)
C6: (-116.066,42.206,-76.301)
C5: (-117.283,42.232,-76.842)
O3': (-110.990,41.287,-75.399)
OP1: (-111.104,34.285,-78.161)
OP2: (-112.137,36.605,-78.510)
C3': (-115.746,32.931,-78.468)
C1': (-117.394,33.783,-76.960)
C5': (-113.771,33.514,-76.932)
O4': (-116.103,33.979,-76.423)
C8: (-117.480,36.334,-77.269)
O2': (-117.748,31.618,-77.957)
C6: (-120.861,37.027,-77.958)
C5: (-119.553,36.600,-77.662)
C4: (-119.377,35.253,-77.425)
P: (-112.076,35.331,-77.755)
C4': (-115.195,33.055,-77.063)
C2': (-117.252,32.918,-78.224)
C2: (-121.508,34.830,-77.719)
N1: (-121.834,36.098,-77.975)
N3: (-120.323,34.305,-77.437)
N6: (-121.193,38.291,-78.228)
N7: (-118.347,37.277,-77.554)
N9: (-118.034,35.080,-77.195)
O5': (-113.534,34.687,-77.721)
O3': (-115.305,31.721,-79.066)
Image (generated by PyMOL):
PyMOL image
show in jmol