ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01068:01206

Extra

PDB:
ATOM 1 O3' G A1067 12.895 104.840 127.067 1.00 44.39 O
ATOM 2 P U A1068 11.710 105.856 127.435 1.00 47.53 P
ATOM 3 OP1 U A1068 10.537 104.987 127.705 1.00 47.73 O
ATOM 4 OP2 U A1068 11.601 106.946 126.425 1.00 45.99 O
ATOM 5 O5' U A1068 12.196 106.484 128.815 1.00 46.72 O
ATOM 6 C5' U A1068 13.361 107.329 128.871 1.00 47.07 C
ATOM 7 C4' U A1068 14.507 106.596 129.524 1.00 46.30 C
ATOM 8 O4' U A1068 15.723 107.387 129.390 1.00 45.51 O
ATOM 9 C3' U A1068 14.355 106.311 131.016 1.00 45.57 C
ATOM 10 O3' U A1068 15.012 105.083 131.313 1.00 47.88 O
ATOM 11 C2' U A1068 15.137 107.460 131.642 1.00 44.55 C
ATOM 12 O2' U A1068 15.608 107.197 132.946 1.00 44.06 O
ATOM 13 C1' U A1068 16.301 107.571 130.662 1.00 43.28 C
ATOM 14 N1 U A1068 17.033 108.846 130.683 1.00 40.49 N
ATOM 15 C2 U A1068 18.376 108.808 131.033 1.00 39.93 C
ATOM 16 O2 U A1068 18.986 107.768 131.270 1.00 38.85 O
ATOM 17 N3 U A1068 18.989 110.031 131.081 1.00 39.07 N
ATOM 18 C4 U A1068 18.429 111.253 130.806 1.00 40.08 C
ATOM 19 O4 U A1068 19.108 112.270 130.951 1.00 43.02 O
ATOM 20 C5 U A1068 17.053 111.208 130.425 1.00 39.18 C
ATOM 21 C6 U A1068 16.417 110.036 130.381 1.00 39.81 C
ATOM 22 P G A1069 14.338 104.040 132.329 1.00 47.73 P
ATOM 23 OP1 G A1069 13.543 104.839 133.293 1.00 50.13 O
ATOM 24 OP2 G A1069 15.377 103.108 132.829 1.00 49.49 O
ATOM 25 O5' G A1069 13.346 103.197 131.419 1.00 47.31 O
TER

ATOM 1 O3' A B1205 22.332 104.274 133.356 1.00 42.95 O
ATOM 2 P A B1206 20.894 104.477 132.684 1.00 44.05 P
ATOM 3 OP1 A B1206 20.258 105.633 133.388 1.00 41.71 O
ATOM 4 OP2 A B1206 20.188 103.165 132.628 1.00 41.08 O
ATOM 5 O5' A B1206 21.261 104.934 131.197 1.00 42.34 O
ATOM 6 C5' A B1206 21.784 103.995 130.223 1.00 37.29 C
ATOM 7 C4' A B1206 23.103 104.485 129.665 1.00 36.18 C
ATOM 8 O4' A B1206 22.951 105.865 129.220 1.00 36.14 O
ATOM 9 C3' A B1206 24.283 104.489 130.636 1.00 35.48 C
ATOM 10 O3' A B1206 25.492 104.297 129.905 1.00 35.69 O
ATOM 11 C2' A B1206 24.267 105.921 131.159 1.00 34.89 C
ATOM 12 O2' A B1206 25.519 106.363 131.646 1.00 33.60 O
ATOM 13 C1' A B1206 23.881 106.687 129.895 1.00 34.88 C
ATOM 14 N9 A B1206 23.254 107.980 130.160 1.00 35.90 N
ATOM 15 C8 A B1206 21.968 108.238 130.574 1.00 36.43 C
ATOM 16 N7 A B1206 21.711 109.515 130.730 1.00 36.33 N
ATOM 17 C5 A B1206 22.904 110.139 130.394 1.00 37.29 C
ATOM 18 C6 A B1206 23.284 111.488 130.347 1.00 36.59 C
ATOM 19 N6 A B1206 22.476 112.496 130.669 1.00 37.46 N
ATOM 20 N1 A B1206 24.543 111.772 129.955 1.00 36.42 N
ATOM 21 C2 A B1206 25.359 110.763 129.646 1.00 36.93 C
ATOM 22 N3 A B1206 25.124 109.457 129.660 1.00 38.07 N
ATOM 23 C4 A B1206 23.862 109.206 130.043 1.00 36.79 C
ATOM 24 P A B1207 25.911 102.831 129.405 1.00 37.41 P
ATOM 25 OP1 A B1207 26.266 102.981 127.974 1.00 35.75 O
ATOM 26 OP2 A B1207 24.867 101.853 129.805 1.00 37.13 O
ATOM 27 O5' A B1207 27.243 102.504 130.214 1.00 37.65 O
TER

Atoms:
C4: (18.429,111.253,130.806)
N3: (18.989,110.031,131.081)
OP1: (10.537,104.987,127.705)
OP2: (11.601,106.946,126.425)
C2: (18.376,108.808,131.033)
C1': (16.301,107.571,130.662)
C3': (14.355,106.311,131.016)
O5': (12.196,106.484,128.815)
O4': (15.723,107.387,129.390)
C5': (13.361,107.329,128.871)
P: (11.710,105.856,127.435)
C4': (14.507,106.596,129.524)
C2': (15.137,107.460,131.642)
O2': (15.608,107.197,132.946)
N1: (17.033,108.846,130.683)
O4: (19.108,112.270,130.951)
O2: (18.986,107.768,131.270)
C6: (16.417,110.036,130.381)
C5: (17.053,111.208,130.425)
O3': (15.012,105.083,131.313)
OP1: (20.258,105.633,133.388)
OP2: (20.188,103.165,132.628)
C3': (24.283,104.489,130.636)
C1': (23.881,106.687,129.895)
C5': (21.784,103.995,130.223)
O4': (22.951,105.865,129.220)
C8: (21.968,108.238,130.574)
O2': (25.519,106.363,131.646)
C6: (23.284,111.488,130.347)
C5: (22.904,110.139,130.394)
C4: (23.862,109.206,130.043)
P: (20.894,104.477,132.684)
C4': (23.103,104.485,129.665)
C2': (24.267,105.921,131.159)
C2: (25.359,110.763,129.646)
N1: (24.543,111.772,129.955)
N3: (25.124,109.457,129.660)
N6: (22.476,112.496,130.669)
N7: (21.711,109.515,130.730)
N9: (23.254,107.980,130.160)
O5': (21.261,104.934,131.197)
O3': (25.492,104.297,129.905)
Image (generated by PyMOL):
PyMOL image
show in jmol