Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3K1V:A5:A24
Extra
PDB:
ATOM 1 O3' G A 4 -11.846 -7.677 21.935 1.00 24.99 O
ATOM 2 P U A 5 -11.258 -9.102 21.474 1.00 26.53 P
ATOM 3 OP1 U A 5 -10.085 -9.408 22.326 1.00 19.81 O
ATOM 4 OP2 U A 5 -11.127 -9.142 19.995 1.00 22.10 O
ATOM 5 O5' U A 5 -12.406 -10.114 21.896 1.00 32.05 O
ATOM 6 C5' U A 5 -12.828 -10.191 23.248 1.00 21.50 C
ATOM 7 C4' U A 5 -14.101 -10.987 23.349 1.00 25.30 C
ATOM 8 O4' U A 5 -15.203 -10.257 22.750 1.00 25.16 O
ATOM 9 C3' U A 5 -14.089 -12.305 22.601 1.00 17.02 C
ATOM 10 O3' U A 5 -13.440 -13.298 23.374 1.00 28.43 O
ATOM 11 C2' U A 5 -15.573 -12.586 22.451 1.00 26.56 C
ATOM 12 O2' U A 5 -16.113 -13.081 23.656 1.00 26.10 O
ATOM 13 C1' U A 5 -16.120 -11.179 22.183 1.00 29.41 C
ATOM 14 N1 U A 5 -16.263 -10.870 20.753 1.00 26.94 N
ATOM 15 C2 U A 5 -17.445 -11.228 20.146 1.00 25.36 C
ATOM 16 O2 U A 5 -18.340 -11.800 20.740 1.00 21.71 O
ATOM 17 N3 U A 5 -17.542 -10.891 18.819 1.00 24.05 N
ATOM 18 C4 U A 5 -16.590 -10.250 18.054 1.00 27.96 C
ATOM 19 O4 U A 5 -16.831 -9.997 16.874 1.00 26.00 O
ATOM 20 C5 U A 5 -15.385 -9.924 18.754 1.00 23.93 C
ATOM 21 C6 U A 5 -15.265 -10.238 20.048 1.00 24.95 C
ATOM 22 P U A 6 -12.550 -14.413 22.643 1.00 26.79 P
ATOM 23 OP1 U A 6 -11.745 -15.109 23.679 1.00 31.12 O
ATOM 24 OP2 U A 6 -11.865 -13.756 21.500 1.00 24.64 O
ATOM 25 O5' U A 6 -13.636 -15.434 22.090 1.00 29.92 O
TER
ATOM 1 O3' A B 23 -23.065 -12.933 23.271 1.00 48.38 O
ATOM 2 P A B 24 -22.436 -14.295 22.692 1.00 42.35 P
ATOM 3 OP1 A B 24 -23.197 -15.415 23.301 1.00 56.55 O
ATOM 4 OP2 A B 24 -20.963 -14.239 22.849 1.00 44.28 O
ATOM 5 O5' A B 24 -22.791 -14.255 21.141 1.00 44.49 O
ATOM 6 C5' A B 24 -24.147 -14.212 20.727 1.00 39.68 C
ATOM 7 C4' A B 24 -24.302 -14.736 19.319 1.00 43.47 C
ATOM 8 O4' A B 24 -23.843 -13.730 18.373 1.00 42.96 O
ATOM 9 C3' A B 24 -23.442 -15.971 19.061 1.00 40.00 C
ATOM 10 O3' A B 24 -24.148 -17.193 18.810 1.00 47.23 O
ATOM 11 C2' A B 24 -22.189 -15.485 18.326 1.00 44.25 C
ATOM 12 O2' A B 24 -21.741 -16.290 17.259 1.00 52.74 O
ATOM 13 C1' A B 24 -22.688 -14.184 17.703 1.00 43.36 C
ATOM 14 N9 A B 24 -21.728 -13.097 17.532 1.00 39.89 N
ATOM 15 C8 A B 24 -20.603 -12.805 18.259 1.00 32.56 C
ATOM 16 N7 A B 24 -19.904 -11.812 17.768 1.00 36.73 N
ATOM 17 C5 A B 24 -20.630 -11.407 16.657 1.00 28.13 C
ATOM 18 C6 A B 24 -20.416 -10.398 15.697 1.00 31.73 C
ATOM 19 N6 A B 24 -19.358 -9.585 15.698 1.00 24.54 N
ATOM 20 N1 A B 24 -21.338 -10.256 14.718 1.00 33.10 N
ATOM 21 C2 A B 24 -22.393 -11.079 14.709 1.00 30.72 C
ATOM 22 N3 A B 24 -22.698 -12.066 15.550 1.00 35.58 N
ATOM 23 C4 A B 24 -21.765 -12.178 16.511 1.00 28.53 C
ATOM 24 P A B 25 -23.538 -18.319 17.834 1.00 45.16 P
ATOM 25 OP1 A B 25 -24.503 -19.445 17.858 1.00 53.77 O
ATOM 26 OP2 A B 25 -22.116 -18.567 18.187 1.00 56.33 O
ATOM 27 O5' A B 25 -23.612 -17.651 16.391 1.00 39.74 O
TER
ATOM 2 P U A 5 -11.258 -9.102 21.474 1.00 26.53 P
ATOM 3 OP1 U A 5 -10.085 -9.408 22.326 1.00 19.81 O
ATOM 4 OP2 U A 5 -11.127 -9.142 19.995 1.00 22.10 O
ATOM 5 O5' U A 5 -12.406 -10.114 21.896 1.00 32.05 O
ATOM 6 C5' U A 5 -12.828 -10.191 23.248 1.00 21.50 C
ATOM 7 C4' U A 5 -14.101 -10.987 23.349 1.00 25.30 C
ATOM 8 O4' U A 5 -15.203 -10.257 22.750 1.00 25.16 O
ATOM 9 C3' U A 5 -14.089 -12.305 22.601 1.00 17.02 C
ATOM 10 O3' U A 5 -13.440 -13.298 23.374 1.00 28.43 O
ATOM 11 C2' U A 5 -15.573 -12.586 22.451 1.00 26.56 C
ATOM 12 O2' U A 5 -16.113 -13.081 23.656 1.00 26.10 O
ATOM 13 C1' U A 5 -16.120 -11.179 22.183 1.00 29.41 C
ATOM 14 N1 U A 5 -16.263 -10.870 20.753 1.00 26.94 N
ATOM 15 C2 U A 5 -17.445 -11.228 20.146 1.00 25.36 C
ATOM 16 O2 U A 5 -18.340 -11.800 20.740 1.00 21.71 O
ATOM 17 N3 U A 5 -17.542 -10.891 18.819 1.00 24.05 N
ATOM 18 C4 U A 5 -16.590 -10.250 18.054 1.00 27.96 C
ATOM 19 O4 U A 5 -16.831 -9.997 16.874 1.00 26.00 O
ATOM 20 C5 U A 5 -15.385 -9.924 18.754 1.00 23.93 C
ATOM 21 C6 U A 5 -15.265 -10.238 20.048 1.00 24.95 C
ATOM 22 P U A 6 -12.550 -14.413 22.643 1.00 26.79 P
ATOM 23 OP1 U A 6 -11.745 -15.109 23.679 1.00 31.12 O
ATOM 24 OP2 U A 6 -11.865 -13.756 21.500 1.00 24.64 O
ATOM 25 O5' U A 6 -13.636 -15.434 22.090 1.00 29.92 O
TER
ATOM 1 O3' A B 23 -23.065 -12.933 23.271 1.00 48.38 O
ATOM 2 P A B 24 -22.436 -14.295 22.692 1.00 42.35 P
ATOM 3 OP1 A B 24 -23.197 -15.415 23.301 1.00 56.55 O
ATOM 4 OP2 A B 24 -20.963 -14.239 22.849 1.00 44.28 O
ATOM 5 O5' A B 24 -22.791 -14.255 21.141 1.00 44.49 O
ATOM 6 C5' A B 24 -24.147 -14.212 20.727 1.00 39.68 C
ATOM 7 C4' A B 24 -24.302 -14.736 19.319 1.00 43.47 C
ATOM 8 O4' A B 24 -23.843 -13.730 18.373 1.00 42.96 O
ATOM 9 C3' A B 24 -23.442 -15.971 19.061 1.00 40.00 C
ATOM 10 O3' A B 24 -24.148 -17.193 18.810 1.00 47.23 O
ATOM 11 C2' A B 24 -22.189 -15.485 18.326 1.00 44.25 C
ATOM 12 O2' A B 24 -21.741 -16.290 17.259 1.00 52.74 O
ATOM 13 C1' A B 24 -22.688 -14.184 17.703 1.00 43.36 C
ATOM 14 N9 A B 24 -21.728 -13.097 17.532 1.00 39.89 N
ATOM 15 C8 A B 24 -20.603 -12.805 18.259 1.00 32.56 C
ATOM 16 N7 A B 24 -19.904 -11.812 17.768 1.00 36.73 N
ATOM 17 C5 A B 24 -20.630 -11.407 16.657 1.00 28.13 C
ATOM 18 C6 A B 24 -20.416 -10.398 15.697 1.00 31.73 C
ATOM 19 N6 A B 24 -19.358 -9.585 15.698 1.00 24.54 N
ATOM 20 N1 A B 24 -21.338 -10.256 14.718 1.00 33.10 N
ATOM 21 C2 A B 24 -22.393 -11.079 14.709 1.00 30.72 C
ATOM 22 N3 A B 24 -22.698 -12.066 15.550 1.00 35.58 N
ATOM 23 C4 A B 24 -21.765 -12.178 16.511 1.00 28.53 C
ATOM 24 P A B 25 -23.538 -18.319 17.834 1.00 45.16 P
ATOM 25 OP1 A B 25 -24.503 -19.445 17.858 1.00 53.77 O
ATOM 26 OP2 A B 25 -22.116 -18.567 18.187 1.00 56.33 O
ATOM 27 O5' A B 25 -23.612 -17.651 16.391 1.00 39.74 O
TER
Atoms:
C4: (-16.590,-10.250,18.054)
N3: (-17.542,-10.891,18.819)
OP1: (-10.085,-9.408,22.326)
OP2: (-11.127,-9.142,19.995)
C2: (-17.445,-11.228,20.146)
C1': (-16.120,-11.179,22.183)
C3': (-14.089,-12.305,22.601)
O5': (-12.406,-10.114,21.896)
O4': (-15.203,-10.257,22.750)
C5': (-12.828,-10.191,23.248)
P: (-11.258,-9.102,21.474)
C4': (-14.101,-10.987,23.349)
C2': (-15.573,-12.586,22.451)
O2': (-16.113,-13.081,23.656)
N1: (-16.263,-10.870,20.753)
O4: (-16.831,-9.997,16.874)
O2: (-18.340,-11.800,20.740)
C6: (-15.265,-10.238,20.048)
C5: (-15.385,-9.924,18.754)
O3': (-13.440,-13.298,23.374)
N3: (-17.542,-10.891,18.819)
OP1: (-10.085,-9.408,22.326)
OP2: (-11.127,-9.142,19.995)
C2: (-17.445,-11.228,20.146)
C1': (-16.120,-11.179,22.183)
C3': (-14.089,-12.305,22.601)
O5': (-12.406,-10.114,21.896)
O4': (-15.203,-10.257,22.750)
C5': (-12.828,-10.191,23.248)
P: (-11.258,-9.102,21.474)
C4': (-14.101,-10.987,23.349)
C2': (-15.573,-12.586,22.451)
O2': (-16.113,-13.081,23.656)
N1: (-16.263,-10.870,20.753)
O4: (-16.831,-9.997,16.874)
O2: (-18.340,-11.800,20.740)
C6: (-15.265,-10.238,20.048)
C5: (-15.385,-9.924,18.754)
O3': (-13.440,-13.298,23.374)
OP1: (-23.197,-15.415,23.301)
OP2: (-20.963,-14.239,22.849)
C3': (-23.442,-15.971,19.061)
C1': (-22.688,-14.184,17.703)
C5': (-24.147,-14.212,20.727)
O4': (-23.843,-13.730,18.373)
C8: (-20.603,-12.805,18.259)
O2': (-21.741,-16.290,17.259)
C6: (-20.416,-10.398,15.697)
C5: (-20.630,-11.407,16.657)
C4: (-21.765,-12.178,16.511)
P: (-22.436,-14.295,22.692)
C4': (-24.302,-14.736,19.319)
C2': (-22.189,-15.485,18.326)
C2: (-22.393,-11.079,14.709)
N1: (-21.338,-10.256,14.718)
N3: (-22.698,-12.066,15.550)
N6: (-19.358,-9.585,15.698)
N7: (-19.904,-11.812,17.768)
N9: (-21.728,-13.097,17.532)
O5': (-22.791,-14.255,21.141)
O3': (-24.148,-17.193,18.810)
OP2: (-20.963,-14.239,22.849)
C3': (-23.442,-15.971,19.061)
C1': (-22.688,-14.184,17.703)
C5': (-24.147,-14.212,20.727)
O4': (-23.843,-13.730,18.373)
C8: (-20.603,-12.805,18.259)
O2': (-21.741,-16.290,17.259)
C6: (-20.416,-10.398,15.697)
C5: (-20.630,-11.407,16.657)
C4: (-21.765,-12.178,16.511)
P: (-22.436,-14.295,22.692)
C4': (-24.302,-14.736,19.319)
C2': (-22.189,-15.485,18.326)
C2: (-22.393,-11.079,14.709)
N1: (-21.338,-10.256,14.718)
N3: (-22.698,-12.066,15.550)
N6: (-19.358,-9.585,15.698)
N7: (-19.904,-11.812,17.768)
N9: (-21.728,-13.097,17.532)
O5': (-22.791,-14.255,21.141)
O3': (-24.148,-17.193,18.810)
Image (generated by PyMOL):