ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1G:A8:A887

Extra

PDB:
ATOM 1 O3' U A 7 -97.787 33.289 -32.419 1.00 71.21 O
ATOM 2 P U A 8 -98.016 34.345 -31.232 1.00 82.19 P
ATOM 3 OP1 U A 8 -99.465 34.550 -31.041 1.00 90.85 O
ATOM 4 OP2 U A 8 -97.130 35.501 -31.476 1.00 82.47 O
ATOM 5 O5' U A 8 -97.505 33.542 -29.949 1.00 94.08 O
ATOM 6 C5' U A 8 -96.127 33.243 -29.751 1.00 97.61 C
ATOM 7 C4' U A 8 -95.902 32.611 -28.386 1.00 83.79 C
ATOM 8 O4' U A 8 -94.489 32.305 -28.281 1.00 69.43 O
ATOM 9 C3' U A 8 -96.257 33.488 -27.179 1.00 74.31 C
ATOM 10 O3' U A 8 -96.853 32.747 -26.089 1.00 75.37 O
ATOM 11 C2' U A 8 -94.888 34.026 -26.793 1.00 69.27 C
ATOM 12 O2' U A 8 -94.804 34.357 -25.427 1.00 78.76 O
ATOM 13 C1' U A 8 -94.042 32.793 -27.043 1.00 73.62 C
ATOM 14 N1 U A 8 -92.591 33.090 -27.093 1.00 83.58 N
ATOM 15 C2 U A 8 -91.694 32.145 -26.632 1.00 86.93 C
ATOM 16 O2 U A 8 -92.027 31.054 -26.197 1.00 89.18 O
ATOM 17 N3 U A 8 -90.375 32.518 -26.708 1.00 81.53 N
ATOM 18 C4 U A 8 -89.874 33.717 -27.179 1.00 78.69 C
ATOM 19 O4 U A 8 -88.663 33.912 -27.185 1.00 79.81 O
ATOM 20 C5 U A 8 -90.874 34.649 -27.633 1.00 82.68 C
ATOM 21 C6 U A 8 -92.167 34.311 -27.573 1.00 80.99 C
ATOM 22 P U A 9 -98.406 32.884 -25.659 1.00 69.43 P
ATOM 23 OP1 U A 9 -98.691 32.005 -24.507 1.00 70.95 O
ATOM 24 OP2 U A 9 -99.206 32.760 -26.893 1.00 70.98 O
ATOM 25 O5' U A 9 -98.534 34.362 -25.087 1.00 75.70 O
TER

ATOM 1 O3' A B 886 -94.133 27.488 -24.991 1.00 67.81 O
ATOM 2 P A B 887 -94.137 28.379 -23.662 1.00 70.77 P
ATOM 3 OP1 A B 887 -94.998 27.721 -22.652 1.00 55.53 O
ATOM 4 OP2 A B 887 -94.430 29.773 -24.055 1.00 83.73 O
ATOM 5 O5' A B 887 -92.611 28.285 -23.191 1.00 65.31 O
ATOM 6 C5' A B 887 -92.163 27.060 -22.662 1.00 58.48 C
ATOM 7 C4' A B 887 -90.655 26.977 -22.598 1.00 47.98 C
ATOM 8 O4' A B 887 -90.062 27.308 -23.874 1.00 52.49 O
ATOM 9 C3' A B 887 -89.971 27.962 -21.677 1.00 47.76 C
ATOM 10 O3' A B 887 -90.157 27.624 -20.320 1.00 43.09 O
ATOM 11 C2' A B 887 -88.529 27.734 -22.110 1.00 54.65 C
ATOM 12 O2' A B 887 -87.956 26.555 -21.572 1.00 51.59 O
ATOM 13 C1' A B 887 -88.711 27.648 -23.624 1.00 56.35 C
ATOM 14 N9 A B 887 -88.469 28.954 -24.198 1.00 59.80 N
ATOM 15 C8 A B 887 -89.384 29.831 -24.704 1.00 66.67 C
ATOM 16 N7 A B 887 -88.848 30.952 -25.134 1.00 63.55 N
ATOM 17 C5 A B 887 -87.498 30.794 -24.881 1.00 58.78 C
ATOM 18 C6 A B 887 -86.385 31.623 -25.105 1.00 66.99 C
ATOM 19 N6 A B 887 -86.469 32.830 -25.662 1.00 78.42 N
ATOM 20 N1 A B 887 -85.176 31.164 -24.737 1.00 58.46 N
ATOM 21 C2 A B 887 -85.102 29.950 -24.184 1.00 63.23 C
ATOM 22 N3 A B 887 -86.073 29.077 -23.922 1.00 54.62 N
ATOM 23 C4 A B 887 -87.253 29.570 -24.300 1.00 53.30 C
ATOM 24 P G B 888 -90.781 28.726 -19.349 1.00 65.59 P
ATOM 25 OP1 G B 888 -90.531 28.300 -17.956 1.00 66.32 O
ATOM 26 OP2 G B 888 -92.171 28.963 -19.826 1.00 65.23 O
ATOM 27 O5' G B 888 -89.878 30.033 -19.634 1.00 73.66 O
TER

Atoms:
C4: (-89.874,33.717,-27.179)
N3: (-90.375,32.518,-26.708)
OP1: (-99.465,34.550,-31.041)
OP2: (-97.130,35.501,-31.476)
C2: (-91.694,32.145,-26.632)
C1': (-94.042,32.793,-27.043)
C3': (-96.257,33.488,-27.179)
O5': (-97.505,33.542,-29.949)
O4': (-94.489,32.305,-28.281)
C5': (-96.127,33.243,-29.751)
P: (-98.016,34.345,-31.232)
C4': (-95.902,32.611,-28.386)
C2': (-94.888,34.026,-26.793)
O2': (-94.804,34.357,-25.427)
N1: (-92.591,33.090,-27.093)
O4: (-88.663,33.912,-27.185)
O2: (-92.027,31.054,-26.197)
C6: (-92.167,34.311,-27.573)
C5: (-90.874,34.649,-27.633)
O3': (-96.853,32.747,-26.089)
OP1: (-94.998,27.721,-22.652)
OP2: (-94.430,29.773,-24.055)
C3': (-89.971,27.962,-21.677)
C1': (-88.711,27.648,-23.624)
C5': (-92.163,27.060,-22.662)
O4': (-90.062,27.308,-23.874)
C8: (-89.384,29.831,-24.704)
O2': (-87.956,26.555,-21.572)
C6: (-86.385,31.623,-25.105)
C5: (-87.498,30.794,-24.881)
C4: (-87.253,29.570,-24.300)
P: (-94.137,28.379,-23.662)
C4': (-90.655,26.977,-22.598)
C2': (-88.529,27.734,-22.110)
C2: (-85.102,29.950,-24.184)
N1: (-85.176,31.164,-24.737)
N3: (-86.073,29.077,-23.922)
N6: (-86.469,32.830,-25.662)
N7: (-88.848,30.952,-25.134)
N9: (-88.469,28.954,-24.198)
O5': (-92.611,28.285,-23.191)
O3': (-90.157,27.624,-20.320)
Image (generated by PyMOL):
PyMOL image
show in jmol