Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D12:D13
Extra
PDB:
ATOM 1 O3' U A 11 22.434 -12.917 -65.413 1.00 48.32 O
ATOM 2 P G A 12 21.785 -12.466 -64.012 1.00 41.22 P
ATOM 3 OP1 G A 12 20.798 -13.505 -63.636 1.00 47.01 O
ATOM 4 OP2 G A 12 21.318 -11.068 -64.174 1.00 41.33 O
ATOM 5 O5' G A 12 23.027 -12.510 -63.015 1.00 41.12 O
ATOM 6 C5' G A 12 23.782 -13.701 -62.840 1.00 43.87 C
ATOM 7 C4' G A 12 25.115 -13.426 -62.186 1.00 40.51 C
ATOM 8 O4' G A 12 25.917 -12.568 -63.041 1.00 39.59 O
ATOM 9 C3' G A 12 25.071 -12.683 -60.859 1.00 41.76 C
ATOM 10 O3' G A 12 24.768 -13.524 -59.759 1.00 39.28 O
ATOM 11 C2' G A 12 26.457 -12.058 -60.786 1.00 43.88 C
ATOM 12 O2' G A 12 27.425 -13.027 -60.409 1.00 38.36 O
ATOM 13 C1' G A 12 26.691 -11.689 -62.250 1.00 38.45 C
ATOM 14 N9 G A 12 26.276 -10.304 -62.542 1.00 36.87 N
ATOM 15 C8 G A 12 25.146 -9.898 -63.209 1.00 38.45 C
ATOM 16 N7 G A 12 25.052 -8.602 -63.318 1.00 40.53 N
ATOM 17 C5 G A 12 26.191 -8.123 -62.686 1.00 38.78 C
ATOM 18 C6 G A 12 26.639 -6.793 -62.487 1.00 39.03 C
ATOM 19 O6 G A 12 26.104 -5.734 -62.838 1.00 36.90 O
ATOM 20 N1 G A 12 27.846 -6.759 -61.796 1.00 42.45 N
ATOM 21 C2 G A 12 28.535 -7.862 -61.354 1.00 42.21 C
ATOM 22 N2 G A 12 29.683 -7.617 -60.705 1.00 42.62 N
ATOM 23 N3 G A 12 28.128 -9.108 -61.533 1.00 41.49 N
ATOM 24 C4 G A 12 26.958 -9.161 -62.203 1.00 38.37 C
ATOM 25 P C A 13 23.889 -12.967 -58.535 1.00 38.83 P
ATOM 26 OP1 C A 13 23.579 -14.122 -57.658 1.00 38.11 O
ATOM 27 OP2 C A 13 22.766 -12.196 -59.121 1.00 42.77 O
ATOM 28 O5' C A 13 24.897 -11.980 -57.795 1.00 37.82 O
TER
ATOM 1 O3' G B 12 24.768 -13.524 -59.759 1.00 39.28 O
ATOM 2 P C B 13 23.889 -12.967 -58.535 1.00 38.83 P
ATOM 3 OP1 C B 13 23.579 -14.122 -57.658 1.00 38.11 O
ATOM 4 OP2 C B 13 22.766 -12.196 -59.121 1.00 42.77 O
ATOM 5 O5' C B 13 24.897 -11.980 -57.795 1.00 37.82 O
ATOM 6 C5' C B 13 26.078 -12.471 -57.178 1.00 39.43 C
ATOM 7 C4' C B 13 26.907 -11.354 -56.591 1.00 36.41 C
ATOM 8 O4' C B 13 27.446 -10.520 -57.652 1.00 38.99 O
ATOM 9 C3' C B 13 26.170 -10.370 -55.699 1.00 41.67 C
ATOM 10 O3' C B 13 25.952 -10.858 -54.388 1.00 48.65 O
ATOM 11 C2' C B 13 27.069 -9.145 -55.756 1.00 40.06 C
ATOM 12 O2' C B 13 28.218 -9.330 -54.943 1.00 46.79 O
ATOM 13 C1' C B 13 27.507 -9.174 -57.218 1.00 38.58 C
ATOM 14 N1 C B 13 26.616 -8.361 -58.073 1.00 42.48 N
ATOM 15 C2 C B 13 26.841 -6.986 -58.174 1.00 37.15 C
ATOM 16 O2 C B 13 27.782 -6.486 -57.540 1.00 40.25 O
ATOM 17 N3 C B 13 26.026 -6.244 -58.955 1.00 36.46 N
ATOM 18 C4 C B 13 25.026 -6.824 -59.619 1.00 37.38 C
ATOM 19 N4 C B 13 24.249 -6.048 -60.379 1.00 39.73 N
ATOM 20 C5 C B 13 24.777 -8.224 -59.534 1.00 34.89 C
ATOM 21 C6 C B 13 25.589 -8.947 -58.758 1.00 35.87 C
ATOM 22 P G B 14 24.732 -10.288 -53.510 1.00 34.63 P
ATOM 23 OP1 G B 14 24.691 -11.076 -52.253 1.00 40.63 O
ATOM 24 OP2 G B 14 23.533 -10.275 -54.383 1.00 42.34 O
ATOM 25 O5' G B 14 25.192 -8.797 -53.198 1.00 42.81 O
TER
ATOM 2 P G A 12 21.785 -12.466 -64.012 1.00 41.22 P
ATOM 3 OP1 G A 12 20.798 -13.505 -63.636 1.00 47.01 O
ATOM 4 OP2 G A 12 21.318 -11.068 -64.174 1.00 41.33 O
ATOM 5 O5' G A 12 23.027 -12.510 -63.015 1.00 41.12 O
ATOM 6 C5' G A 12 23.782 -13.701 -62.840 1.00 43.87 C
ATOM 7 C4' G A 12 25.115 -13.426 -62.186 1.00 40.51 C
ATOM 8 O4' G A 12 25.917 -12.568 -63.041 1.00 39.59 O
ATOM 9 C3' G A 12 25.071 -12.683 -60.859 1.00 41.76 C
ATOM 10 O3' G A 12 24.768 -13.524 -59.759 1.00 39.28 O
ATOM 11 C2' G A 12 26.457 -12.058 -60.786 1.00 43.88 C
ATOM 12 O2' G A 12 27.425 -13.027 -60.409 1.00 38.36 O
ATOM 13 C1' G A 12 26.691 -11.689 -62.250 1.00 38.45 C
ATOM 14 N9 G A 12 26.276 -10.304 -62.542 1.00 36.87 N
ATOM 15 C8 G A 12 25.146 -9.898 -63.209 1.00 38.45 C
ATOM 16 N7 G A 12 25.052 -8.602 -63.318 1.00 40.53 N
ATOM 17 C5 G A 12 26.191 -8.123 -62.686 1.00 38.78 C
ATOM 18 C6 G A 12 26.639 -6.793 -62.487 1.00 39.03 C
ATOM 19 O6 G A 12 26.104 -5.734 -62.838 1.00 36.90 O
ATOM 20 N1 G A 12 27.846 -6.759 -61.796 1.00 42.45 N
ATOM 21 C2 G A 12 28.535 -7.862 -61.354 1.00 42.21 C
ATOM 22 N2 G A 12 29.683 -7.617 -60.705 1.00 42.62 N
ATOM 23 N3 G A 12 28.128 -9.108 -61.533 1.00 41.49 N
ATOM 24 C4 G A 12 26.958 -9.161 -62.203 1.00 38.37 C
ATOM 25 P C A 13 23.889 -12.967 -58.535 1.00 38.83 P
ATOM 26 OP1 C A 13 23.579 -14.122 -57.658 1.00 38.11 O
ATOM 27 OP2 C A 13 22.766 -12.196 -59.121 1.00 42.77 O
ATOM 28 O5' C A 13 24.897 -11.980 -57.795 1.00 37.82 O
TER
ATOM 1 O3' G B 12 24.768 -13.524 -59.759 1.00 39.28 O
ATOM 2 P C B 13 23.889 -12.967 -58.535 1.00 38.83 P
ATOM 3 OP1 C B 13 23.579 -14.122 -57.658 1.00 38.11 O
ATOM 4 OP2 C B 13 22.766 -12.196 -59.121 1.00 42.77 O
ATOM 5 O5' C B 13 24.897 -11.980 -57.795 1.00 37.82 O
ATOM 6 C5' C B 13 26.078 -12.471 -57.178 1.00 39.43 C
ATOM 7 C4' C B 13 26.907 -11.354 -56.591 1.00 36.41 C
ATOM 8 O4' C B 13 27.446 -10.520 -57.652 1.00 38.99 O
ATOM 9 C3' C B 13 26.170 -10.370 -55.699 1.00 41.67 C
ATOM 10 O3' C B 13 25.952 -10.858 -54.388 1.00 48.65 O
ATOM 11 C2' C B 13 27.069 -9.145 -55.756 1.00 40.06 C
ATOM 12 O2' C B 13 28.218 -9.330 -54.943 1.00 46.79 O
ATOM 13 C1' C B 13 27.507 -9.174 -57.218 1.00 38.58 C
ATOM 14 N1 C B 13 26.616 -8.361 -58.073 1.00 42.48 N
ATOM 15 C2 C B 13 26.841 -6.986 -58.174 1.00 37.15 C
ATOM 16 O2 C B 13 27.782 -6.486 -57.540 1.00 40.25 O
ATOM 17 N3 C B 13 26.026 -6.244 -58.955 1.00 36.46 N
ATOM 18 C4 C B 13 25.026 -6.824 -59.619 1.00 37.38 C
ATOM 19 N4 C B 13 24.249 -6.048 -60.379 1.00 39.73 N
ATOM 20 C5 C B 13 24.777 -8.224 -59.534 1.00 34.89 C
ATOM 21 C6 C B 13 25.589 -8.947 -58.758 1.00 35.87 C
ATOM 22 P G B 14 24.732 -10.288 -53.510 1.00 34.63 P
ATOM 23 OP1 G B 14 24.691 -11.076 -52.253 1.00 40.63 O
ATOM 24 OP2 G B 14 23.533 -10.275 -54.383 1.00 42.34 O
ATOM 25 O5' G B 14 25.192 -8.797 -53.198 1.00 42.81 O
TER
Atoms:
OP1: (20.798,-13.505,-63.636)
OP2: (21.318,-11.068,-64.174)
C3': (25.071,-12.683,-60.859)
C1': (26.691,-11.689,-62.250)
C5': (23.782,-13.701,-62.840)
O6: (26.104,-5.734,-62.838)
O4': (25.917,-12.568,-63.041)
C8: (25.146,-9.898,-63.209)
C2: (28.535,-7.862,-61.354)
C6: (26.639,-6.793,-62.487)
C5: (26.191,-8.123,-62.686)
C4: (26.958,-9.161,-62.203)
P: (21.785,-12.466,-64.012)
C4': (25.115,-13.426,-62.186)
C2': (26.457,-12.058,-60.786)
O2': (27.425,-13.027,-60.409)
N1: (27.846,-6.759,-61.796)
N2: (29.683,-7.617,-60.705)
N3: (28.128,-9.108,-61.533)
N7: (25.052,-8.602,-63.318)
N9: (26.276,-10.304,-62.542)
O5': (23.027,-12.510,-63.015)
O3': (24.768,-13.524,-59.759)
OP2: (21.318,-11.068,-64.174)
C3': (25.071,-12.683,-60.859)
C1': (26.691,-11.689,-62.250)
C5': (23.782,-13.701,-62.840)
O6: (26.104,-5.734,-62.838)
O4': (25.917,-12.568,-63.041)
C8: (25.146,-9.898,-63.209)
C2: (28.535,-7.862,-61.354)
C6: (26.639,-6.793,-62.487)
C5: (26.191,-8.123,-62.686)
C4: (26.958,-9.161,-62.203)
P: (21.785,-12.466,-64.012)
C4': (25.115,-13.426,-62.186)
C2': (26.457,-12.058,-60.786)
O2': (27.425,-13.027,-60.409)
N1: (27.846,-6.759,-61.796)
N2: (29.683,-7.617,-60.705)
N3: (28.128,-9.108,-61.533)
N7: (25.052,-8.602,-63.318)
N9: (26.276,-10.304,-62.542)
O5': (23.027,-12.510,-63.015)
O3': (24.768,-13.524,-59.759)
C2: (26.841,-6.986,-58.174)
OP1: (23.579,-14.122,-57.658)
OP2: (22.766,-12.196,-59.121)
C4: (25.026,-6.824,-59.619)
O5': (24.897,-11.980,-57.795)
C3': (26.170,-10.370,-55.699)
C1': (27.507,-9.174,-57.218)
O4': (27.446,-10.520,-57.652)
C5': (26.078,-12.471,-57.178)
P: (23.889,-12.967,-58.535)
O2: (27.782,-6.486,-57.540)
C4': (26.907,-11.354,-56.591)
C2': (27.069,-9.145,-55.756)
O2': (28.218,-9.330,-54.943)
N1: (26.616,-8.361,-58.073)
N3: (26.026,-6.244,-58.955)
N4: (24.249,-6.048,-60.379)
C6: (25.589,-8.947,-58.758)
C5: (24.777,-8.224,-59.534)
O3': (25.952,-10.858,-54.388)
OP1: (23.579,-14.122,-57.658)
OP2: (22.766,-12.196,-59.121)
C4: (25.026,-6.824,-59.619)
O5': (24.897,-11.980,-57.795)
C3': (26.170,-10.370,-55.699)
C1': (27.507,-9.174,-57.218)
O4': (27.446,-10.520,-57.652)
C5': (26.078,-12.471,-57.178)
P: (23.889,-12.967,-58.535)
O2: (27.782,-6.486,-57.540)
C4': (26.907,-11.354,-56.591)
C2': (27.069,-9.145,-55.756)
O2': (28.218,-9.330,-54.943)
N1: (26.616,-8.361,-58.073)
N3: (26.026,-6.244,-58.955)
N4: (24.249,-6.048,-60.379)
C6: (25.589,-8.947,-58.758)
C5: (24.777,-8.224,-59.534)
O3': (25.952,-10.858,-54.388)
Image (generated by PyMOL):