Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A564:A563
Extra
PDB:
ATOM 1 O3' U A 563 -12.962 69.312 70.462 1.00 19.80 O
ATOM 2 P G A 564 -14.283 69.725 69.630 1.00 18.97 P
ATOM 3 OP1 G A 564 -15.308 68.673 69.880 1.00 18.97 O
ATOM 4 OP2 G A 564 -13.864 69.984 68.233 1.00 18.97 O
ATOM 5 O5' G A 564 -14.716 71.093 70.340 1.00 18.97 O
ATOM 6 C5' G A 564 -15.785 71.897 69.846 1.00 18.97 C
ATOM 7 C4' G A 564 -16.335 72.803 70.926 1.00 18.97 C
ATOM 8 O4' G A 564 -17.333 72.078 71.686 1.00 18.97 O
ATOM 9 C3' G A 564 -15.317 73.294 71.951 1.00 18.97 C
ATOM 10 O3' G A 564 -15.747 74.549 72.476 1.00 18.97 O
ATOM 11 C2' G A 564 -15.419 72.235 73.040 1.00 18.97 C
ATOM 12 O2' G A 564 -14.969 72.649 74.306 1.00 18.97 O
ATOM 13 C1' G A 564 -16.919 71.959 73.042 1.00 18.97 C
ATOM 14 N9 G A 564 -17.285 70.620 73.506 1.00 18.92 N
ATOM 15 C8 G A 564 -16.821 69.484 72.915 1.00 18.92 C
ATOM 16 N7 G A 564 -17.285 68.396 73.446 1.00 18.92 N
ATOM 17 C5 G A 564 -18.119 68.839 74.451 1.00 18.92 C
ATOM 18 C6 G A 564 -18.901 68.081 75.364 1.00 18.92 C
ATOM 19 O6 G A 564 -19.005 66.867 75.452 1.00 18.92 O
ATOM 20 N1 G A 564 -19.626 68.857 76.244 1.00 18.92 N
ATOM 21 C2 G A 564 -19.600 70.222 76.226 1.00 18.92 C
ATOM 22 N2 G A 564 -20.393 70.768 77.173 1.00 18.92 N
ATOM 23 N3 G A 564 -18.866 70.960 75.366 1.00 18.92 N
ATOM 24 C4 G A 564 -18.143 70.213 74.506 1.00 18.92 C
ATOM 25 P G A 565 -15.288 75.928 71.785 1.00 5.94 P
ATOM 26 OP1 G A 565 -15.103 75.655 70.331 1.00 5.94 O
ATOM 27 OP2 G A 565 -14.130 76.446 72.573 1.00 5.94 O
ATOM 28 O5' G A 565 -16.547 76.875 72.006 1.00 5.94 O
TER
ATOM 1 O3' C B 562 -10.552 72.088 75.024 1.00 18.49 O
ATOM 2 P U B 563 -11.725 72.648 74.111 1.00 19.80 P
ATOM 3 OP1 U B 563 -11.175 73.777 73.319 1.00 19.80 O
ATOM 4 OP2 U B 563 -12.870 72.902 75.014 1.00 19.80 O
ATOM 5 O5' U B 563 -12.052 71.421 73.161 1.00 19.80 O
ATOM 6 C5' U B 563 -11.053 70.477 72.818 1.00 19.80 C
ATOM 7 C4' U B 563 -11.660 69.132 72.521 1.00 19.80 C
ATOM 8 O4' U B 563 -11.861 68.407 73.763 1.00 19.80 O
ATOM 9 C3' U B 563 -13.029 69.161 71.867 1.00 19.80 C
ATOM 10 O3' U B 563 -12.962 69.312 70.462 1.00 19.80 O
ATOM 11 C2' U B 563 -13.653 67.845 72.301 1.00 19.80 C
ATOM 12 O2' U B 563 -13.264 66.789 71.441 1.00 19.80 O
ATOM 13 C1' U B 563 -13.026 67.619 73.681 1.00 19.80 C
ATOM 14 N1 U B 563 -13.957 67.994 74.796 1.00 19.87 N
ATOM 15 C2 U B 563 -14.733 67.000 75.363 1.00 19.87 C
ATOM 16 O2 U B 563 -14.702 65.835 75.030 1.00 19.87 O
ATOM 17 N3 U B 563 -15.576 67.394 76.345 1.00 19.87 N
ATOM 18 C4 U B 563 -15.745 68.653 76.832 1.00 19.87 C
ATOM 19 O4 U B 563 -16.558 68.819 77.743 1.00 19.87 O
ATOM 20 C5 U B 563 -14.927 69.642 76.213 1.00 19.87 C
ATOM 21 C6 U B 563 -14.086 69.285 75.242 1.00 19.87 C
ATOM 22 P G B 564 -14.283 69.725 69.630 1.00 18.97 P
ATOM 23 OP1 G B 564 -15.308 68.673 69.880 1.00 18.97 O
ATOM 24 OP2 G B 564 -13.864 69.984 68.233 1.00 18.97 O
ATOM 25 O5' G B 564 -14.716 71.093 70.340 1.00 18.97 O
TER
ATOM 2 P G A 564 -14.283 69.725 69.630 1.00 18.97 P
ATOM 3 OP1 G A 564 -15.308 68.673 69.880 1.00 18.97 O
ATOM 4 OP2 G A 564 -13.864 69.984 68.233 1.00 18.97 O
ATOM 5 O5' G A 564 -14.716 71.093 70.340 1.00 18.97 O
ATOM 6 C5' G A 564 -15.785 71.897 69.846 1.00 18.97 C
ATOM 7 C4' G A 564 -16.335 72.803 70.926 1.00 18.97 C
ATOM 8 O4' G A 564 -17.333 72.078 71.686 1.00 18.97 O
ATOM 9 C3' G A 564 -15.317 73.294 71.951 1.00 18.97 C
ATOM 10 O3' G A 564 -15.747 74.549 72.476 1.00 18.97 O
ATOM 11 C2' G A 564 -15.419 72.235 73.040 1.00 18.97 C
ATOM 12 O2' G A 564 -14.969 72.649 74.306 1.00 18.97 O
ATOM 13 C1' G A 564 -16.919 71.959 73.042 1.00 18.97 C
ATOM 14 N9 G A 564 -17.285 70.620 73.506 1.00 18.92 N
ATOM 15 C8 G A 564 -16.821 69.484 72.915 1.00 18.92 C
ATOM 16 N7 G A 564 -17.285 68.396 73.446 1.00 18.92 N
ATOM 17 C5 G A 564 -18.119 68.839 74.451 1.00 18.92 C
ATOM 18 C6 G A 564 -18.901 68.081 75.364 1.00 18.92 C
ATOM 19 O6 G A 564 -19.005 66.867 75.452 1.00 18.92 O
ATOM 20 N1 G A 564 -19.626 68.857 76.244 1.00 18.92 N
ATOM 21 C2 G A 564 -19.600 70.222 76.226 1.00 18.92 C
ATOM 22 N2 G A 564 -20.393 70.768 77.173 1.00 18.92 N
ATOM 23 N3 G A 564 -18.866 70.960 75.366 1.00 18.92 N
ATOM 24 C4 G A 564 -18.143 70.213 74.506 1.00 18.92 C
ATOM 25 P G A 565 -15.288 75.928 71.785 1.00 5.94 P
ATOM 26 OP1 G A 565 -15.103 75.655 70.331 1.00 5.94 O
ATOM 27 OP2 G A 565 -14.130 76.446 72.573 1.00 5.94 O
ATOM 28 O5' G A 565 -16.547 76.875 72.006 1.00 5.94 O
TER
ATOM 1 O3' C B 562 -10.552 72.088 75.024 1.00 18.49 O
ATOM 2 P U B 563 -11.725 72.648 74.111 1.00 19.80 P
ATOM 3 OP1 U B 563 -11.175 73.777 73.319 1.00 19.80 O
ATOM 4 OP2 U B 563 -12.870 72.902 75.014 1.00 19.80 O
ATOM 5 O5' U B 563 -12.052 71.421 73.161 1.00 19.80 O
ATOM 6 C5' U B 563 -11.053 70.477 72.818 1.00 19.80 C
ATOM 7 C4' U B 563 -11.660 69.132 72.521 1.00 19.80 C
ATOM 8 O4' U B 563 -11.861 68.407 73.763 1.00 19.80 O
ATOM 9 C3' U B 563 -13.029 69.161 71.867 1.00 19.80 C
ATOM 10 O3' U B 563 -12.962 69.312 70.462 1.00 19.80 O
ATOM 11 C2' U B 563 -13.653 67.845 72.301 1.00 19.80 C
ATOM 12 O2' U B 563 -13.264 66.789 71.441 1.00 19.80 O
ATOM 13 C1' U B 563 -13.026 67.619 73.681 1.00 19.80 C
ATOM 14 N1 U B 563 -13.957 67.994 74.796 1.00 19.87 N
ATOM 15 C2 U B 563 -14.733 67.000 75.363 1.00 19.87 C
ATOM 16 O2 U B 563 -14.702 65.835 75.030 1.00 19.87 O
ATOM 17 N3 U B 563 -15.576 67.394 76.345 1.00 19.87 N
ATOM 18 C4 U B 563 -15.745 68.653 76.832 1.00 19.87 C
ATOM 19 O4 U B 563 -16.558 68.819 77.743 1.00 19.87 O
ATOM 20 C5 U B 563 -14.927 69.642 76.213 1.00 19.87 C
ATOM 21 C6 U B 563 -14.086 69.285 75.242 1.00 19.87 C
ATOM 22 P G B 564 -14.283 69.725 69.630 1.00 18.97 P
ATOM 23 OP1 G B 564 -15.308 68.673 69.880 1.00 18.97 O
ATOM 24 OP2 G B 564 -13.864 69.984 68.233 1.00 18.97 O
ATOM 25 O5' G B 564 -14.716 71.093 70.340 1.00 18.97 O
TER
Atoms:
OP1: (-15.308,68.673,69.880)
OP2: (-13.864,69.984,68.233)
C3': (-15.317,73.294,71.951)
C1': (-16.919,71.959,73.042)
C5': (-15.785,71.897,69.846)
O6: (-19.005,66.867,75.452)
O4': (-17.333,72.078,71.686)
C8: (-16.821,69.484,72.915)
C2: (-19.600,70.222,76.226)
C6: (-18.901,68.081,75.364)
C5: (-18.119,68.839,74.451)
C4: (-18.143,70.213,74.506)
P: (-14.283,69.725,69.630)
C4': (-16.335,72.803,70.926)
C2': (-15.419,72.235,73.040)
O2': (-14.969,72.649,74.306)
N1: (-19.626,68.857,76.244)
N2: (-20.393,70.768,77.173)
N3: (-18.866,70.960,75.366)
N7: (-17.285,68.396,73.446)
N9: (-17.285,70.620,73.506)
O5': (-14.716,71.093,70.340)
O3': (-15.747,74.549,72.476)
OP2: (-13.864,69.984,68.233)
C3': (-15.317,73.294,71.951)
C1': (-16.919,71.959,73.042)
C5': (-15.785,71.897,69.846)
O6: (-19.005,66.867,75.452)
O4': (-17.333,72.078,71.686)
C8: (-16.821,69.484,72.915)
C2: (-19.600,70.222,76.226)
C6: (-18.901,68.081,75.364)
C5: (-18.119,68.839,74.451)
C4: (-18.143,70.213,74.506)
P: (-14.283,69.725,69.630)
C4': (-16.335,72.803,70.926)
C2': (-15.419,72.235,73.040)
O2': (-14.969,72.649,74.306)
N1: (-19.626,68.857,76.244)
N2: (-20.393,70.768,77.173)
N3: (-18.866,70.960,75.366)
N7: (-17.285,68.396,73.446)
N9: (-17.285,70.620,73.506)
O5': (-14.716,71.093,70.340)
O3': (-15.747,74.549,72.476)
C4: (-15.745,68.653,76.832)
N3: (-15.576,67.394,76.345)
OP1: (-11.175,73.777,73.319)
OP2: (-12.870,72.902,75.014)
C2: (-14.733,67.000,75.363)
C1': (-13.026,67.619,73.681)
C3': (-13.029,69.161,71.867)
O5': (-12.052,71.421,73.161)
O4': (-11.861,68.407,73.763)
C5': (-11.053,70.477,72.818)
P: (-11.725,72.648,74.111)
C4': (-11.660,69.132,72.521)
C2': (-13.653,67.845,72.301)
O2': (-13.264,66.789,71.441)
N1: (-13.957,67.994,74.796)
O4: (-16.558,68.819,77.743)
O2: (-14.702,65.835,75.030)
C6: (-14.086,69.285,75.242)
C5: (-14.927,69.642,76.213)
O3': (-12.962,69.312,70.462)
N3: (-15.576,67.394,76.345)
OP1: (-11.175,73.777,73.319)
OP2: (-12.870,72.902,75.014)
C2: (-14.733,67.000,75.363)
C1': (-13.026,67.619,73.681)
C3': (-13.029,69.161,71.867)
O5': (-12.052,71.421,73.161)
O4': (-11.861,68.407,73.763)
C5': (-11.053,70.477,72.818)
P: (-11.725,72.648,74.111)
C4': (-11.660,69.132,72.521)
C2': (-13.653,67.845,72.301)
O2': (-13.264,66.789,71.441)
N1: (-13.957,67.994,74.796)
O4: (-16.558,68.819,77.743)
O2: (-14.702,65.835,75.030)
C6: (-14.086,69.285,75.242)
C5: (-14.927,69.642,76.213)
O3': (-12.962,69.312,70.462)
Image (generated by PyMOL):