Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02621:02628
Extra
PDB:
ATOM 1 O3' U A2620 39.181 109.258 168.713 1.00 47.76 O
ATOM 2 P G A2621 39.280 107.656 168.841 1.00 50.38 P
ATOM 3 OP1 G A2621 38.232 107.220 169.804 1.00 49.99 O
ATOM 4 OP2 G A2621 40.698 107.273 169.073 1.00 46.67 O
ATOM 5 O5' G A2621 38.852 107.119 167.403 1.00 48.32 O
ATOM 6 C5' G A2621 37.506 107.273 166.928 1.00 48.91 C
ATOM 7 C4' G A2621 37.330 106.544 165.617 1.00 50.86 C
ATOM 8 O4' G A2621 38.051 107.222 164.548 1.00 50.06 O
ATOM 9 C3' G A2621 37.884 105.132 165.580 1.00 50.62 C
ATOM 10 O3' G A2621 37.059 104.195 166.255 1.00 51.39 O
ATOM 11 C2' G A2621 38.023 104.899 164.081 1.00 49.79 C
ATOM 12 O2' G A2621 36.791 104.654 163.433 1.00 48.08 O
ATOM 13 C1' G A2621 38.567 106.258 163.635 1.00 50.40 C
ATOM 14 N9 G A2621 40.027 106.273 163.718 1.00 52.06 N
ATOM 15 C8 G A2621 40.794 106.657 164.794 1.00 52.03 C
ATOM 16 N7 G A2621 42.073 106.494 164.597 1.00 51.83 N
ATOM 17 C5 G A2621 42.161 105.991 163.307 1.00 52.40 C
ATOM 18 C6 G A2621 43.295 105.622 162.546 1.00 52.88 C
ATOM 19 O6 G A2621 44.493 105.671 162.868 1.00 53.57 O
ATOM 20 N1 G A2621 42.932 105.160 161.284 1.00 53.47 N
ATOM 21 C2 G A2621 41.644 105.077 160.811 1.00 53.05 C
ATOM 22 N2 G A2621 41.499 104.619 159.558 1.00 51.25 N
ATOM 23 N3 G A2621 40.579 105.420 161.512 1.00 53.01 N
ATOM 24 C4 G A2621 40.908 105.863 162.744 1.00 52.79 C
ATOM 25 P A A2622 37.682 102.795 166.739 1.00 52.94 P
ATOM 26 OP1 A A2622 36.873 102.327 167.881 1.00 55.25 O
ATOM 27 OP2 A A2622 39.154 102.893 166.882 1.00 53.12 O
ATOM 28 O5' A A2622 37.348 101.824 165.526 1.00 56.17 O
TER
ATOM 1 O3' A B2627 48.579 101.766 167.112 1.00 52.53 O
ATOM 2 P U B2628 48.250 103.308 166.839 1.00 53.68 P
ATOM 3 OP1 U B2628 49.486 104.094 167.074 1.00 53.27 O
ATOM 4 OP2 U B2628 47.019 103.642 167.593 1.00 54.51 O
ATOM 5 O5' U B2628 47.907 103.341 165.282 1.00 52.54 O
ATOM 6 C5' U B2628 48.911 103.005 164.313 1.00 50.37 C
ATOM 7 C4' U B2628 48.319 102.956 162.928 1.00 48.74 C
ATOM 8 O4' U B2628 47.336 101.894 162.851 1.00 48.37 O
ATOM 9 C3' U B2628 47.565 104.192 162.475 1.00 47.51 C
ATOM 10 O3' U B2628 48.459 105.191 162.004 1.00 47.61 O
ATOM 11 C2' U B2628 46.693 103.628 161.361 1.00 46.77 C
ATOM 12 O2' U B2628 47.405 103.432 160.158 1.00 45.49 O
ATOM 13 C1' U B2628 46.317 102.261 161.941 1.00 46.63 C
ATOM 14 N1 U B2628 45.041 102.306 162.666 1.00 48.27 N
ATOM 15 C2 U B2628 43.893 102.032 161.952 1.00 49.01 C
ATOM 16 O2 U B2628 43.905 101.711 160.775 1.00 49.38 O
ATOM 17 N3 U B2628 42.726 102.145 162.669 1.00 49.81 N
ATOM 18 C4 U B2628 42.598 102.485 163.997 1.00 48.88 C
ATOM 19 O4 U B2628 41.476 102.586 164.488 1.00 50.33 O
ATOM 20 C5 U B2628 43.832 102.729 164.673 1.00 48.56 C
ATOM 21 C6 U B2628 44.983 102.632 164.005 1.00 48.07 C
ATOM 22 P C B2629 48.621 106.567 162.815 1.00 48.91 P
ATOM 23 OP1 C B2629 50.063 106.890 162.865 1.00 50.09 O
ATOM 24 OP2 C B2629 47.852 106.440 164.082 1.00 52.40 O
ATOM 25 O5' C B2629 47.918 107.667 161.902 1.00 47.07 O
TER
ATOM 2 P G A2621 39.280 107.656 168.841 1.00 50.38 P
ATOM 3 OP1 G A2621 38.232 107.220 169.804 1.00 49.99 O
ATOM 4 OP2 G A2621 40.698 107.273 169.073 1.00 46.67 O
ATOM 5 O5' G A2621 38.852 107.119 167.403 1.00 48.32 O
ATOM 6 C5' G A2621 37.506 107.273 166.928 1.00 48.91 C
ATOM 7 C4' G A2621 37.330 106.544 165.617 1.00 50.86 C
ATOM 8 O4' G A2621 38.051 107.222 164.548 1.00 50.06 O
ATOM 9 C3' G A2621 37.884 105.132 165.580 1.00 50.62 C
ATOM 10 O3' G A2621 37.059 104.195 166.255 1.00 51.39 O
ATOM 11 C2' G A2621 38.023 104.899 164.081 1.00 49.79 C
ATOM 12 O2' G A2621 36.791 104.654 163.433 1.00 48.08 O
ATOM 13 C1' G A2621 38.567 106.258 163.635 1.00 50.40 C
ATOM 14 N9 G A2621 40.027 106.273 163.718 1.00 52.06 N
ATOM 15 C8 G A2621 40.794 106.657 164.794 1.00 52.03 C
ATOM 16 N7 G A2621 42.073 106.494 164.597 1.00 51.83 N
ATOM 17 C5 G A2621 42.161 105.991 163.307 1.00 52.40 C
ATOM 18 C6 G A2621 43.295 105.622 162.546 1.00 52.88 C
ATOM 19 O6 G A2621 44.493 105.671 162.868 1.00 53.57 O
ATOM 20 N1 G A2621 42.932 105.160 161.284 1.00 53.47 N
ATOM 21 C2 G A2621 41.644 105.077 160.811 1.00 53.05 C
ATOM 22 N2 G A2621 41.499 104.619 159.558 1.00 51.25 N
ATOM 23 N3 G A2621 40.579 105.420 161.512 1.00 53.01 N
ATOM 24 C4 G A2621 40.908 105.863 162.744 1.00 52.79 C
ATOM 25 P A A2622 37.682 102.795 166.739 1.00 52.94 P
ATOM 26 OP1 A A2622 36.873 102.327 167.881 1.00 55.25 O
ATOM 27 OP2 A A2622 39.154 102.893 166.882 1.00 53.12 O
ATOM 28 O5' A A2622 37.348 101.824 165.526 1.00 56.17 O
TER
ATOM 1 O3' A B2627 48.579 101.766 167.112 1.00 52.53 O
ATOM 2 P U B2628 48.250 103.308 166.839 1.00 53.68 P
ATOM 3 OP1 U B2628 49.486 104.094 167.074 1.00 53.27 O
ATOM 4 OP2 U B2628 47.019 103.642 167.593 1.00 54.51 O
ATOM 5 O5' U B2628 47.907 103.341 165.282 1.00 52.54 O
ATOM 6 C5' U B2628 48.911 103.005 164.313 1.00 50.37 C
ATOM 7 C4' U B2628 48.319 102.956 162.928 1.00 48.74 C
ATOM 8 O4' U B2628 47.336 101.894 162.851 1.00 48.37 O
ATOM 9 C3' U B2628 47.565 104.192 162.475 1.00 47.51 C
ATOM 10 O3' U B2628 48.459 105.191 162.004 1.00 47.61 O
ATOM 11 C2' U B2628 46.693 103.628 161.361 1.00 46.77 C
ATOM 12 O2' U B2628 47.405 103.432 160.158 1.00 45.49 O
ATOM 13 C1' U B2628 46.317 102.261 161.941 1.00 46.63 C
ATOM 14 N1 U B2628 45.041 102.306 162.666 1.00 48.27 N
ATOM 15 C2 U B2628 43.893 102.032 161.952 1.00 49.01 C
ATOM 16 O2 U B2628 43.905 101.711 160.775 1.00 49.38 O
ATOM 17 N3 U B2628 42.726 102.145 162.669 1.00 49.81 N
ATOM 18 C4 U B2628 42.598 102.485 163.997 1.00 48.88 C
ATOM 19 O4 U B2628 41.476 102.586 164.488 1.00 50.33 O
ATOM 20 C5 U B2628 43.832 102.729 164.673 1.00 48.56 C
ATOM 21 C6 U B2628 44.983 102.632 164.005 1.00 48.07 C
ATOM 22 P C B2629 48.621 106.567 162.815 1.00 48.91 P
ATOM 23 OP1 C B2629 50.063 106.890 162.865 1.00 50.09 O
ATOM 24 OP2 C B2629 47.852 106.440 164.082 1.00 52.40 O
ATOM 25 O5' C B2629 47.918 107.667 161.902 1.00 47.07 O
TER
Atoms:
OP1: (38.232,107.220,169.804)
OP2: (40.698,107.273,169.073)
C3': (37.884,105.132,165.580)
C1': (38.567,106.258,163.635)
C5': (37.506,107.273,166.928)
O6: (44.493,105.671,162.868)
O4': (38.051,107.222,164.548)
C8: (40.794,106.657,164.794)
C2: (41.644,105.077,160.811)
C6: (43.295,105.622,162.546)
C5: (42.161,105.991,163.307)
C4: (40.908,105.863,162.744)
P: (39.280,107.656,168.841)
C4': (37.330,106.544,165.617)
C2': (38.023,104.899,164.081)
O2': (36.791,104.654,163.433)
N1: (42.932,105.160,161.284)
N2: (41.499,104.619,159.558)
N3: (40.579,105.420,161.512)
N7: (42.073,106.494,164.597)
N9: (40.027,106.273,163.718)
O5': (38.852,107.119,167.403)
O3': (37.059,104.195,166.255)
OP2: (40.698,107.273,169.073)
C3': (37.884,105.132,165.580)
C1': (38.567,106.258,163.635)
C5': (37.506,107.273,166.928)
O6: (44.493,105.671,162.868)
O4': (38.051,107.222,164.548)
C8: (40.794,106.657,164.794)
C2: (41.644,105.077,160.811)
C6: (43.295,105.622,162.546)
C5: (42.161,105.991,163.307)
C4: (40.908,105.863,162.744)
P: (39.280,107.656,168.841)
C4': (37.330,106.544,165.617)
C2': (38.023,104.899,164.081)
O2': (36.791,104.654,163.433)
N1: (42.932,105.160,161.284)
N2: (41.499,104.619,159.558)
N3: (40.579,105.420,161.512)
N7: (42.073,106.494,164.597)
N9: (40.027,106.273,163.718)
O5': (38.852,107.119,167.403)
O3': (37.059,104.195,166.255)
C4: (42.598,102.485,163.997)
N3: (42.726,102.145,162.669)
OP1: (49.486,104.094,167.074)
OP2: (47.019,103.642,167.593)
C2: (43.893,102.032,161.952)
C1': (46.317,102.261,161.941)
C3': (47.565,104.192,162.475)
O5': (47.907,103.341,165.282)
O4': (47.336,101.894,162.851)
C5': (48.911,103.005,164.313)
P: (48.250,103.308,166.839)
C4': (48.319,102.956,162.928)
C2': (46.693,103.628,161.361)
O2': (47.405,103.432,160.158)
N1: (45.041,102.306,162.666)
O4: (41.476,102.586,164.488)
O2: (43.905,101.711,160.775)
C6: (44.983,102.632,164.005)
C5: (43.832,102.729,164.673)
O3': (48.459,105.191,162.004)
N3: (42.726,102.145,162.669)
OP1: (49.486,104.094,167.074)
OP2: (47.019,103.642,167.593)
C2: (43.893,102.032,161.952)
C1': (46.317,102.261,161.941)
C3': (47.565,104.192,162.475)
O5': (47.907,103.341,165.282)
O4': (47.336,101.894,162.851)
C5': (48.911,103.005,164.313)
P: (48.250,103.308,166.839)
C4': (48.319,102.956,162.928)
C2': (46.693,103.628,161.361)
O2': (47.405,103.432,160.158)
N1: (45.041,102.306,162.666)
O4: (41.476,102.586,164.488)
O2: (43.905,101.711,160.775)
C6: (44.983,102.632,164.005)
C5: (43.832,102.729,164.673)
O3': (48.459,105.191,162.004)
Image (generated by PyMOL):