Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:A564:A610
Extra
PDB:
ATOM 1 O3' G A 563 26.548 42.099 43.361 1.00 92.18 O
ATOM 2 P G A 564 27.588 41.742 44.543 1.00 90.57 P
ATOM 3 OP1 G A 564 27.377 40.317 44.904 1.00 84.30 O
ATOM 4 OP2 G A 564 27.458 42.794 45.581 1.00 92.60 O
ATOM 5 O5' G A 564 29.045 41.896 43.909 1.00 95.05 O
ATOM 6 C5' G A 564 29.700 40.793 43.281 1.00 94.19 C
ATOM 7 C4' G A 564 31.170 41.097 43.062 1.00 91.55 C
ATOM 8 O4' G A 564 31.290 42.393 42.427 1.00 93.79 O
ATOM 9 C3' G A 564 32.111 41.096 44.269 1.00 84.91 C
ATOM 10 O3' G A 564 33.068 40.037 44.218 1.00 78.57 O
ATOM 11 C2' G A 564 32.739 42.497 44.306 1.00 86.33 C
ATOM 12 O2' G A 564 34.144 42.460 44.522 1.00 83.89 O
ATOM 13 C1' G A 564 32.424 43.068 42.923 1.00 90.84 C
ATOM 14 N9 G A 564 32.107 44.498 42.938 1.00 90.35 N
ATOM 15 C8 G A 564 31.076 45.115 43.608 1.00 88.16 C
ATOM 16 N7 G A 564 31.005 46.396 43.370 1.00 85.34 N
ATOM 17 C5 G A 564 32.060 46.645 42.498 1.00 94.91 C
ATOM 18 C6 G A 564 32.483 47.863 41.864 1.00 99.49 C
ATOM 19 O6 G A 564 31.987 49.002 41.947 1.00 93.87 O
ATOM 20 N1 G A 564 33.600 47.655 41.059 1.00 98.89 N
ATOM 21 C2 G A 564 34.232 46.447 40.878 1.00 92.64 C
ATOM 22 N2 G A 564 35.302 46.449 40.057 1.00 89.71 N
ATOM 23 N3 G A 564 33.849 45.317 41.455 1.00 91.28 N
ATOM 24 C4 G A 564 32.762 45.486 42.240 1.00 90.57 C
ATOM 25 P C A 565 33.644 39.429 45.593 1.00 82.55 P
ATOM 26 OP1 C A 565 32.497 39.240 46.518 1.00 76.60 O
ATOM 27 OP2 C A 565 34.815 40.260 46.015 1.00 76.66 O
ATOM 28 O5' C A 565 34.154 37.984 45.183 1.00 75.62 O
TER
ATOM 1 O3' A B 609 33.627 53.042 46.889 1.00 90.07 O
ATOM 2 P U B 610 32.428 53.085 45.811 1.00 93.52 P
ATOM 3 OP1 U B 610 31.966 54.491 45.688 1.00 90.55 O
ATOM 4 OP2 U B 610 31.443 52.027 46.179 1.00 93.50 O
ATOM 5 O5' U B 610 33.111 52.644 44.437 1.00 94.38 O
ATOM 6 C5' U B 610 34.323 53.242 43.952 1.00 89.05 C
ATOM 7 C4' U B 610 35.138 52.210 43.196 1.00 85.48 C
ATOM 8 O4' U B 610 35.452 51.160 44.142 1.00 85.06 O
ATOM 9 C3' U B 610 34.399 51.476 42.064 1.00 82.66 C
ATOM 10 O3' U B 610 34.452 51.984 40.709 1.00 87.10 O
ATOM 11 C2' U B 610 35.070 50.102 42.032 1.00 82.30 C
ATOM 12 O2' U B 610 36.139 49.969 41.128 1.00 84.16 O
ATOM 13 C1' U B 610 35.611 49.944 43.448 1.00 85.94 C
ATOM 14 N1 U B 610 35.006 48.827 44.182 1.00 87.23 N
ATOM 15 C2 U B 610 35.724 47.649 44.225 1.00 86.95 C
ATOM 16 O2 U B 610 36.834 47.531 43.747 1.00 87.05 O
ATOM 17 N3 U B 610 35.100 46.612 44.851 1.00 83.10 N
ATOM 18 C4 U B 610 33.868 46.624 45.431 1.00 84.23 C
ATOM 19 O4 U B 610 33.387 45.564 45.821 1.00 86.33 O
ATOM 20 C5 U B 610 33.202 47.885 45.387 1.00 88.03 C
ATOM 21 C6 U B 610 33.781 48.918 44.774 1.00 86.01 C
ATOM 22 P A B 611 35.009 53.459 40.362 1.00 90.39 P
ATOM 23 OP1 A B 611 35.095 54.304 41.582 1.00 90.45 O
ATOM 24 OP2 A B 611 34.207 53.931 39.206 1.00 90.92 O
ATOM 25 O5' A B 611 36.489 53.174 39.812 1.00 82.07 O
TER
ATOM 2 P G A 564 27.588 41.742 44.543 1.00 90.57 P
ATOM 3 OP1 G A 564 27.377 40.317 44.904 1.00 84.30 O
ATOM 4 OP2 G A 564 27.458 42.794 45.581 1.00 92.60 O
ATOM 5 O5' G A 564 29.045 41.896 43.909 1.00 95.05 O
ATOM 6 C5' G A 564 29.700 40.793 43.281 1.00 94.19 C
ATOM 7 C4' G A 564 31.170 41.097 43.062 1.00 91.55 C
ATOM 8 O4' G A 564 31.290 42.393 42.427 1.00 93.79 O
ATOM 9 C3' G A 564 32.111 41.096 44.269 1.00 84.91 C
ATOM 10 O3' G A 564 33.068 40.037 44.218 1.00 78.57 O
ATOM 11 C2' G A 564 32.739 42.497 44.306 1.00 86.33 C
ATOM 12 O2' G A 564 34.144 42.460 44.522 1.00 83.89 O
ATOM 13 C1' G A 564 32.424 43.068 42.923 1.00 90.84 C
ATOM 14 N9 G A 564 32.107 44.498 42.938 1.00 90.35 N
ATOM 15 C8 G A 564 31.076 45.115 43.608 1.00 88.16 C
ATOM 16 N7 G A 564 31.005 46.396 43.370 1.00 85.34 N
ATOM 17 C5 G A 564 32.060 46.645 42.498 1.00 94.91 C
ATOM 18 C6 G A 564 32.483 47.863 41.864 1.00 99.49 C
ATOM 19 O6 G A 564 31.987 49.002 41.947 1.00 93.87 O
ATOM 20 N1 G A 564 33.600 47.655 41.059 1.00 98.89 N
ATOM 21 C2 G A 564 34.232 46.447 40.878 1.00 92.64 C
ATOM 22 N2 G A 564 35.302 46.449 40.057 1.00 89.71 N
ATOM 23 N3 G A 564 33.849 45.317 41.455 1.00 91.28 N
ATOM 24 C4 G A 564 32.762 45.486 42.240 1.00 90.57 C
ATOM 25 P C A 565 33.644 39.429 45.593 1.00 82.55 P
ATOM 26 OP1 C A 565 32.497 39.240 46.518 1.00 76.60 O
ATOM 27 OP2 C A 565 34.815 40.260 46.015 1.00 76.66 O
ATOM 28 O5' C A 565 34.154 37.984 45.183 1.00 75.62 O
TER
ATOM 1 O3' A B 609 33.627 53.042 46.889 1.00 90.07 O
ATOM 2 P U B 610 32.428 53.085 45.811 1.00 93.52 P
ATOM 3 OP1 U B 610 31.966 54.491 45.688 1.00 90.55 O
ATOM 4 OP2 U B 610 31.443 52.027 46.179 1.00 93.50 O
ATOM 5 O5' U B 610 33.111 52.644 44.437 1.00 94.38 O
ATOM 6 C5' U B 610 34.323 53.242 43.952 1.00 89.05 C
ATOM 7 C4' U B 610 35.138 52.210 43.196 1.00 85.48 C
ATOM 8 O4' U B 610 35.452 51.160 44.142 1.00 85.06 O
ATOM 9 C3' U B 610 34.399 51.476 42.064 1.00 82.66 C
ATOM 10 O3' U B 610 34.452 51.984 40.709 1.00 87.10 O
ATOM 11 C2' U B 610 35.070 50.102 42.032 1.00 82.30 C
ATOM 12 O2' U B 610 36.139 49.969 41.128 1.00 84.16 O
ATOM 13 C1' U B 610 35.611 49.944 43.448 1.00 85.94 C
ATOM 14 N1 U B 610 35.006 48.827 44.182 1.00 87.23 N
ATOM 15 C2 U B 610 35.724 47.649 44.225 1.00 86.95 C
ATOM 16 O2 U B 610 36.834 47.531 43.747 1.00 87.05 O
ATOM 17 N3 U B 610 35.100 46.612 44.851 1.00 83.10 N
ATOM 18 C4 U B 610 33.868 46.624 45.431 1.00 84.23 C
ATOM 19 O4 U B 610 33.387 45.564 45.821 1.00 86.33 O
ATOM 20 C5 U B 610 33.202 47.885 45.387 1.00 88.03 C
ATOM 21 C6 U B 610 33.781 48.918 44.774 1.00 86.01 C
ATOM 22 P A B 611 35.009 53.459 40.362 1.00 90.39 P
ATOM 23 OP1 A B 611 35.095 54.304 41.582 1.00 90.45 O
ATOM 24 OP2 A B 611 34.207 53.931 39.206 1.00 90.92 O
ATOM 25 O5' A B 611 36.489 53.174 39.812 1.00 82.07 O
TER
Atoms:
OP1: (27.377,40.317,44.904)
OP2: (27.458,42.794,45.581)
C3': (32.111,41.096,44.269)
C1': (32.424,43.068,42.923)
C5': (29.700,40.793,43.281)
O6: (31.987,49.002,41.947)
O4': (31.290,42.393,42.427)
C8: (31.076,45.115,43.608)
C2: (34.232,46.447,40.878)
C6: (32.483,47.863,41.864)
C5: (32.060,46.645,42.498)
C4: (32.762,45.486,42.240)
P: (27.588,41.742,44.543)
C4': (31.170,41.097,43.062)
C2': (32.739,42.497,44.306)
O2': (34.144,42.460,44.522)
N1: (33.600,47.655,41.059)
N2: (35.302,46.449,40.057)
N3: (33.849,45.317,41.455)
N7: (31.005,46.396,43.370)
N9: (32.107,44.498,42.938)
O5': (29.045,41.896,43.909)
O3': (33.068,40.037,44.218)
OP2: (27.458,42.794,45.581)
C3': (32.111,41.096,44.269)
C1': (32.424,43.068,42.923)
C5': (29.700,40.793,43.281)
O6: (31.987,49.002,41.947)
O4': (31.290,42.393,42.427)
C8: (31.076,45.115,43.608)
C2: (34.232,46.447,40.878)
C6: (32.483,47.863,41.864)
C5: (32.060,46.645,42.498)
C4: (32.762,45.486,42.240)
P: (27.588,41.742,44.543)
C4': (31.170,41.097,43.062)
C2': (32.739,42.497,44.306)
O2': (34.144,42.460,44.522)
N1: (33.600,47.655,41.059)
N2: (35.302,46.449,40.057)
N3: (33.849,45.317,41.455)
N7: (31.005,46.396,43.370)
N9: (32.107,44.498,42.938)
O5': (29.045,41.896,43.909)
O3': (33.068,40.037,44.218)
C4: (33.868,46.624,45.431)
N3: (35.100,46.612,44.851)
OP1: (31.966,54.491,45.688)
OP2: (31.443,52.027,46.179)
C2: (35.724,47.649,44.225)
C1': (35.611,49.944,43.448)
C3': (34.399,51.476,42.064)
O5': (33.111,52.644,44.437)
O4': (35.452,51.160,44.142)
C5': (34.323,53.242,43.952)
P: (32.428,53.085,45.811)
C4': (35.138,52.210,43.196)
C2': (35.070,50.102,42.032)
O2': (36.139,49.969,41.128)
N1: (35.006,48.827,44.182)
O4: (33.387,45.564,45.821)
O2: (36.834,47.531,43.747)
C6: (33.781,48.918,44.774)
C5: (33.202,47.885,45.387)
O3': (34.452,51.984,40.709)
N3: (35.100,46.612,44.851)
OP1: (31.966,54.491,45.688)
OP2: (31.443,52.027,46.179)
C2: (35.724,47.649,44.225)
C1': (35.611,49.944,43.448)
C3': (34.399,51.476,42.064)
O5': (33.111,52.644,44.437)
O4': (35.452,51.160,44.142)
C5': (34.323,53.242,43.952)
P: (32.428,53.085,45.811)
C4': (35.138,52.210,43.196)
C2': (35.070,50.102,42.032)
O2': (36.139,49.969,41.128)
N1: (35.006,48.827,44.182)
O4: (33.387,45.564,45.821)
O2: (36.834,47.531,43.747)
C6: (33.781,48.918,44.774)
C5: (33.202,47.885,45.387)
O3': (34.452,51.984,40.709)
Image (generated by PyMOL):