Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J6S:B4:B5
Extra
PDB:
ATOM 1 O3' G A 3 29.615 36.697 2.565 1.00 10.17 O
ATOM 2 P G A 4 29.455 36.895 0.974 1.00 9.80 P
ATOM 3 OP1 G A 4 30.860 36.618 0.484 1.00 11.14 O
ATOM 4 OP2 G A 4 28.784 38.137 0.634 1.00 11.11 O
ATOM 5 O5' G A 4 28.493 35.727 0.514 1.00 10.20 O
ATOM 6 C5' G A 4 28.937 34.373 0.627 1.00 10.73 C
ATOM 7 C4' G A 4 27.808 33.432 0.337 1.00 11.22 C
ATOM 8 O4' G A 4 26.815 33.496 1.399 1.00 10.38 O
ATOM 9 C3' G A 4 27.028 33.704 -0.922 1.00 12.08 C
ATOM 10 O3' G A 4 27.784 33.208 -2.032 1.00 12.99 O
ATOM 11 C2' G A 4 25.701 33.004 -0.642 1.00 11.59 C
ATOM 12 O2' G A 4 25.711 31.605 -0.881 1.00 13.49 O
ATOM 13 C1' G A 4 25.534 33.248 0.861 1.00 10.38 C
ATOM 14 N9 G A 4 24.689 34.403 1.153 1.00 9.04 N
ATOM 15 C8 G A 4 25.084 35.719 1.253 1.00 8.19 C
ATOM 16 N7 G A 4 24.087 36.528 1.491 1.00 8.35 N
ATOM 17 C5 G A 4 22.972 35.686 1.594 1.00 7.65 C
ATOM 18 C6 G A 4 21.618 35.983 1.852 1.00 7.80 C
ATOM 19 O6 G A 4 21.130 37.057 2.102 1.00 7.92 O
ATOM 20 N1 G A 4 20.816 34.848 1.800 1.00 7.53 N
ATOM 21 C2 G A 4 21.260 33.580 1.544 1.00 8.01 C
ATOM 22 N2 G A 4 20.323 32.633 1.482 1.00 7.92 N
ATOM 23 N3 G A 4 22.537 33.277 1.345 1.00 8.38 N
ATOM 24 C4 G A 4 23.328 34.378 1.374 1.00 8.26 C
ATOM 25 P U A 5 27.488 33.752 -3.509 1.00 14.01 P
ATOM 26 OP1 U A 5 26.162 33.197 -3.829 1.00 15.23 O
ATOM 27 OP2 U A 5 28.641 33.479 -4.408 1.00 15.58 O
ATOM 28 O5' U A 5 27.445 35.325 -3.381 1.00 14.60 O
TER
ATOM 1 O3' G B 4 27.784 33.208 -2.032 1.00 12.99 O
ATOM 2 P U B 5 27.488 33.752 -3.509 1.00 14.01 P
ATOM 3 OP1 U B 5 26.162 33.197 -3.829 1.00 15.23 O
ATOM 4 OP2 U B 5 28.641 33.479 -4.408 1.00 15.58 O
ATOM 5 O5' U B 5 27.445 35.325 -3.381 1.00 14.60 O
ATOM 6 C5' U B 5 27.768 36.171 -4.482 1.00 15.42 C
ATOM 7 C4' U B 5 27.441 37.587 -4.124 1.00 15.72 C
ATOM 8 O4' U B 5 26.004 37.703 -4.091 1.00 14.75 O
ATOM 9 C3' U B 5 28.009 38.263 -2.881 1.00 16.16 C
ATOM 10 O3' U B 5 28.765 39.418 -3.187 1.00 17.78 O
ATOM 11 C2' U B 5 26.863 38.076 -1.889 1.00 15.72 C
ATOM 12 O2' U B 5 27.158 38.911 -0.772 1.00 17.17 O
ATOM 13 C1' U B 5 25.810 38.286 -2.823 1.00 14.86 C
ATOM 14 N1 U B 5 24.434 38.051 -2.413 1.00 13.46 N
ATOM 15 C2 U B 5 23.561 38.955 -1.915 1.00 12.83 C
ATOM 16 O2 U B 5 23.774 40.138 -1.922 1.00 12.60 O
ATOM 17 N3 U B 5 22.402 38.430 -1.410 1.00 12.72 N
ATOM 18 C4 U B 5 22.041 37.114 -1.339 1.00 12.54 C
ATOM 19 O4 U B 5 20.913 36.833 -0.941 1.00 12.11 O
ATOM 20 C5 U B 5 23.018 36.195 -1.863 1.00 12.92 C
ATOM 21 C6 U B 5 24.159 36.691 -2.365 1.00 13.17 C
TER
ATOM 2 P G A 4 29.455 36.895 0.974 1.00 9.80 P
ATOM 3 OP1 G A 4 30.860 36.618 0.484 1.00 11.14 O
ATOM 4 OP2 G A 4 28.784 38.137 0.634 1.00 11.11 O
ATOM 5 O5' G A 4 28.493 35.727 0.514 1.00 10.20 O
ATOM 6 C5' G A 4 28.937 34.373 0.627 1.00 10.73 C
ATOM 7 C4' G A 4 27.808 33.432 0.337 1.00 11.22 C
ATOM 8 O4' G A 4 26.815 33.496 1.399 1.00 10.38 O
ATOM 9 C3' G A 4 27.028 33.704 -0.922 1.00 12.08 C
ATOM 10 O3' G A 4 27.784 33.208 -2.032 1.00 12.99 O
ATOM 11 C2' G A 4 25.701 33.004 -0.642 1.00 11.59 C
ATOM 12 O2' G A 4 25.711 31.605 -0.881 1.00 13.49 O
ATOM 13 C1' G A 4 25.534 33.248 0.861 1.00 10.38 C
ATOM 14 N9 G A 4 24.689 34.403 1.153 1.00 9.04 N
ATOM 15 C8 G A 4 25.084 35.719 1.253 1.00 8.19 C
ATOM 16 N7 G A 4 24.087 36.528 1.491 1.00 8.35 N
ATOM 17 C5 G A 4 22.972 35.686 1.594 1.00 7.65 C
ATOM 18 C6 G A 4 21.618 35.983 1.852 1.00 7.80 C
ATOM 19 O6 G A 4 21.130 37.057 2.102 1.00 7.92 O
ATOM 20 N1 G A 4 20.816 34.848 1.800 1.00 7.53 N
ATOM 21 C2 G A 4 21.260 33.580 1.544 1.00 8.01 C
ATOM 22 N2 G A 4 20.323 32.633 1.482 1.00 7.92 N
ATOM 23 N3 G A 4 22.537 33.277 1.345 1.00 8.38 N
ATOM 24 C4 G A 4 23.328 34.378 1.374 1.00 8.26 C
ATOM 25 P U A 5 27.488 33.752 -3.509 1.00 14.01 P
ATOM 26 OP1 U A 5 26.162 33.197 -3.829 1.00 15.23 O
ATOM 27 OP2 U A 5 28.641 33.479 -4.408 1.00 15.58 O
ATOM 28 O5' U A 5 27.445 35.325 -3.381 1.00 14.60 O
TER
ATOM 1 O3' G B 4 27.784 33.208 -2.032 1.00 12.99 O
ATOM 2 P U B 5 27.488 33.752 -3.509 1.00 14.01 P
ATOM 3 OP1 U B 5 26.162 33.197 -3.829 1.00 15.23 O
ATOM 4 OP2 U B 5 28.641 33.479 -4.408 1.00 15.58 O
ATOM 5 O5' U B 5 27.445 35.325 -3.381 1.00 14.60 O
ATOM 6 C5' U B 5 27.768 36.171 -4.482 1.00 15.42 C
ATOM 7 C4' U B 5 27.441 37.587 -4.124 1.00 15.72 C
ATOM 8 O4' U B 5 26.004 37.703 -4.091 1.00 14.75 O
ATOM 9 C3' U B 5 28.009 38.263 -2.881 1.00 16.16 C
ATOM 10 O3' U B 5 28.765 39.418 -3.187 1.00 17.78 O
ATOM 11 C2' U B 5 26.863 38.076 -1.889 1.00 15.72 C
ATOM 12 O2' U B 5 27.158 38.911 -0.772 1.00 17.17 O
ATOM 13 C1' U B 5 25.810 38.286 -2.823 1.00 14.86 C
ATOM 14 N1 U B 5 24.434 38.051 -2.413 1.00 13.46 N
ATOM 15 C2 U B 5 23.561 38.955 -1.915 1.00 12.83 C
ATOM 16 O2 U B 5 23.774 40.138 -1.922 1.00 12.60 O
ATOM 17 N3 U B 5 22.402 38.430 -1.410 1.00 12.72 N
ATOM 18 C4 U B 5 22.041 37.114 -1.339 1.00 12.54 C
ATOM 19 O4 U B 5 20.913 36.833 -0.941 1.00 12.11 O
ATOM 20 C5 U B 5 23.018 36.195 -1.863 1.00 12.92 C
ATOM 21 C6 U B 5 24.159 36.691 -2.365 1.00 13.17 C
TER
Atoms:
OP1: (30.860,36.618,0.484)
OP2: (28.784,38.137,0.634)
C3': (27.028,33.704,-0.922)
C1': (25.534,33.248,0.861)
C5': (28.937,34.373,0.627)
O6: (21.130,37.057,2.102)
O4': (26.815,33.496,1.399)
C8: (25.084,35.719,1.253)
C2: (21.260,33.580,1.544)
C6: (21.618,35.983,1.852)
C5: (22.972,35.686,1.594)
C4: (23.328,34.378,1.374)
P: (29.455,36.895,0.974)
C4': (27.808,33.432,0.337)
C2': (25.701,33.004,-0.642)
O2': (25.711,31.605,-0.881)
N1: (20.816,34.848,1.800)
N2: (20.323,32.633,1.482)
N3: (22.537,33.277,1.345)
N7: (24.087,36.528,1.491)
N9: (24.689,34.403,1.153)
O5': (28.493,35.727,0.514)
O3': (27.784,33.208,-2.032)
OP2: (28.784,38.137,0.634)
C3': (27.028,33.704,-0.922)
C1': (25.534,33.248,0.861)
C5': (28.937,34.373,0.627)
O6: (21.130,37.057,2.102)
O4': (26.815,33.496,1.399)
C8: (25.084,35.719,1.253)
C2: (21.260,33.580,1.544)
C6: (21.618,35.983,1.852)
C5: (22.972,35.686,1.594)
C4: (23.328,34.378,1.374)
P: (29.455,36.895,0.974)
C4': (27.808,33.432,0.337)
C2': (25.701,33.004,-0.642)
O2': (25.711,31.605,-0.881)
N1: (20.816,34.848,1.800)
N2: (20.323,32.633,1.482)
N3: (22.537,33.277,1.345)
N7: (24.087,36.528,1.491)
N9: (24.689,34.403,1.153)
O5': (28.493,35.727,0.514)
O3': (27.784,33.208,-2.032)
C4: (22.041,37.114,-1.339)
N3: (22.402,38.430,-1.410)
OP1: (26.162,33.197,-3.829)
OP2: (28.641,33.479,-4.408)
C2: (23.561,38.955,-1.915)
C1': (25.810,38.286,-2.823)
C3': (28.009,38.263,-2.881)
O5': (27.445,35.325,-3.381)
O4': (26.004,37.703,-4.091)
C5': (27.768,36.171,-4.482)
P: (27.488,33.752,-3.509)
C4': (27.441,37.587,-4.124)
C2': (26.863,38.076,-1.889)
O2': (27.158,38.911,-0.772)
N1: (24.434,38.051,-2.413)
O4: (20.913,36.833,-0.941)
O2: (23.774,40.138,-1.922)
C6: (24.159,36.691,-2.365)
C5: (23.018,36.195,-1.863)
O3': (28.765,39.418,-3.187)
N3: (22.402,38.430,-1.410)
OP1: (26.162,33.197,-3.829)
OP2: (28.641,33.479,-4.408)
C2: (23.561,38.955,-1.915)
C1': (25.810,38.286,-2.823)
C3': (28.009,38.263,-2.881)
O5': (27.445,35.325,-3.381)
O4': (26.004,37.703,-4.091)
C5': (27.768,36.171,-4.482)
P: (27.488,33.752,-3.509)
C4': (27.441,37.587,-4.124)
C2': (26.863,38.076,-1.889)
O2': (27.158,38.911,-0.772)
N1: (24.434,38.051,-2.413)
O4: (20.913,36.833,-0.941)
O2: (23.774,40.138,-1.922)
C6: (24.159,36.691,-2.365)
C5: (23.018,36.195,-1.863)
O3': (28.765,39.418,-3.187)
Image (generated by PyMOL):