Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0355:0271
Extra
PDB:
ATOM 1 O3' U A 354 73.539 112.692 -9.406 1.00103.84 O
ATOM 2 P G A 355 73.721 111.628 -10.601 1.00105.23 P
ATOM 3 OP1 G A 355 75.154 111.667 -10.990 1.00104.14 O
ATOM 4 OP2 G A 355 72.670 111.875 -11.629 1.00104.87 O
ATOM 5 O5' G A 355 73.436 110.217 -9.917 1.00105.61 O
ATOM 6 C5' G A 355 73.981 109.907 -8.620 1.00106.79 C
ATOM 7 C4' G A 355 73.078 108.943 -7.884 1.00107.38 C
ATOM 8 O4' G A 355 71.735 109.501 -7.834 1.00106.58 O
ATOM 9 C3' G A 355 72.931 107.549 -8.489 1.00107.95 C
ATOM 10 O3' G A 355 72.697 106.628 -7.431 1.00108.30 O
ATOM 11 C2' G A 355 71.661 107.684 -9.323 1.00107.82 C
ATOM 12 O2' G A 355 70.994 106.453 -9.543 1.00108.09 O
ATOM 13 C1' G A 355 70.825 108.604 -8.436 1.00106.73 C
ATOM 14 N9 G A 355 69.828 109.382 -9.162 1.00106.10 N
ATOM 15 C8 G A 355 70.024 110.160 -10.280 1.00106.00 C
ATOM 16 N7 G A 355 68.927 110.724 -10.708 1.00106.44 N
ATOM 17 C5 G A 355 67.950 110.294 -9.819 1.00106.30 C
ATOM 18 C6 G A 355 66.556 110.572 -9.773 1.00106.63 C
ATOM 19 O6 G A 355 65.880 111.272 -10.540 1.00107.67 O
ATOM 20 N1 G A 355 65.944 109.935 -8.699 1.00106.12 N
ATOM 21 C2 G A 355 66.584 109.132 -7.788 1.00105.64 C
ATOM 22 N2 G A 355 65.819 108.611 -6.820 1.00106.21 N
ATOM 23 N3 G A 355 67.876 108.861 -7.822 1.00105.28 N
ATOM 24 C4 G A 355 68.493 109.470 -8.856 1.00105.77 C
ATOM 25 P C A 356 73.635 105.334 -7.260 1.00108.09 P
ATOM 26 OP1 C A 356 74.864 105.741 -6.525 1.00107.70 O
ATOM 27 OP2 C A 356 73.759 104.655 -8.572 1.00108.77 O
ATOM 28 O5' C A 356 72.769 104.419 -6.288 1.00108.36 O
TER
ATOM 1 O3' C B 270 65.066 101.334 -13.356 1.00139.62 O
ATOM 2 P U B 271 64.131 102.639 -13.487 1.00141.11 P
ATOM 3 OP1 U B 271 62.713 102.197 -13.454 1.00140.79 O
ATOM 4 OP2 U B 271 64.620 103.433 -14.641 1.00141.06 O
ATOM 5 O5' U B 271 64.431 103.463 -12.152 1.00142.92 O
ATOM 6 C5' U B 271 64.884 102.790 -10.953 1.00144.85 C
ATOM 7 C4' U B 271 66.028 103.551 -10.313 1.00145.87 C
ATOM 8 O4' U B 271 66.800 104.212 -11.351 1.00146.37 O
ATOM 9 C3' U B 271 65.642 104.676 -9.369 1.00146.31 C
ATOM 10 O3' U B 271 65.393 104.160 -8.066 1.00146.33 O
ATOM 11 C2' U B 271 66.889 105.554 -9.391 1.00146.43 C
ATOM 12 O2' U B 271 67.934 105.045 -8.582 1.00146.44 O
ATOM 13 C1' U B 271 67.307 105.440 -10.860 1.00145.93 C
ATOM 14 N1 U B 271 66.821 106.527 -11.728 1.00144.99 N
ATOM 15 C2 U B 271 67.768 107.276 -12.408 1.00144.79 C
ATOM 16 O2 U B 271 68.970 107.059 -12.336 1.00144.87 O
ATOM 17 N3 U B 271 67.258 108.289 -13.180 1.00144.65 N
ATOM 18 C4 U B 271 65.932 108.626 -13.342 1.00144.42 C
ATOM 19 O4 U B 271 65.637 109.613 -14.018 1.00144.54 O
ATOM 20 C5 U B 271 65.015 107.797 -12.623 1.00143.99 C
ATOM 21 C6 U B 271 65.476 106.803 -11.861 1.00143.99 C
ATOM 22 P C B 272 64.005 103.409 -7.753 1.00146.90 P
ATOM 23 OP1 C B 272 64.299 101.948 -7.749 1.00147.05 O
ATOM 24 OP2 C B 272 62.949 103.943 -8.652 1.00146.45 O
ATOM 25 O5' C B 272 63.651 103.847 -6.264 1.00145.40 O
TER
ATOM 2 P G A 355 73.721 111.628 -10.601 1.00105.23 P
ATOM 3 OP1 G A 355 75.154 111.667 -10.990 1.00104.14 O
ATOM 4 OP2 G A 355 72.670 111.875 -11.629 1.00104.87 O
ATOM 5 O5' G A 355 73.436 110.217 -9.917 1.00105.61 O
ATOM 6 C5' G A 355 73.981 109.907 -8.620 1.00106.79 C
ATOM 7 C4' G A 355 73.078 108.943 -7.884 1.00107.38 C
ATOM 8 O4' G A 355 71.735 109.501 -7.834 1.00106.58 O
ATOM 9 C3' G A 355 72.931 107.549 -8.489 1.00107.95 C
ATOM 10 O3' G A 355 72.697 106.628 -7.431 1.00108.30 O
ATOM 11 C2' G A 355 71.661 107.684 -9.323 1.00107.82 C
ATOM 12 O2' G A 355 70.994 106.453 -9.543 1.00108.09 O
ATOM 13 C1' G A 355 70.825 108.604 -8.436 1.00106.73 C
ATOM 14 N9 G A 355 69.828 109.382 -9.162 1.00106.10 N
ATOM 15 C8 G A 355 70.024 110.160 -10.280 1.00106.00 C
ATOM 16 N7 G A 355 68.927 110.724 -10.708 1.00106.44 N
ATOM 17 C5 G A 355 67.950 110.294 -9.819 1.00106.30 C
ATOM 18 C6 G A 355 66.556 110.572 -9.773 1.00106.63 C
ATOM 19 O6 G A 355 65.880 111.272 -10.540 1.00107.67 O
ATOM 20 N1 G A 355 65.944 109.935 -8.699 1.00106.12 N
ATOM 21 C2 G A 355 66.584 109.132 -7.788 1.00105.64 C
ATOM 22 N2 G A 355 65.819 108.611 -6.820 1.00106.21 N
ATOM 23 N3 G A 355 67.876 108.861 -7.822 1.00105.28 N
ATOM 24 C4 G A 355 68.493 109.470 -8.856 1.00105.77 C
ATOM 25 P C A 356 73.635 105.334 -7.260 1.00108.09 P
ATOM 26 OP1 C A 356 74.864 105.741 -6.525 1.00107.70 O
ATOM 27 OP2 C A 356 73.759 104.655 -8.572 1.00108.77 O
ATOM 28 O5' C A 356 72.769 104.419 -6.288 1.00108.36 O
TER
ATOM 1 O3' C B 270 65.066 101.334 -13.356 1.00139.62 O
ATOM 2 P U B 271 64.131 102.639 -13.487 1.00141.11 P
ATOM 3 OP1 U B 271 62.713 102.197 -13.454 1.00140.79 O
ATOM 4 OP2 U B 271 64.620 103.433 -14.641 1.00141.06 O
ATOM 5 O5' U B 271 64.431 103.463 -12.152 1.00142.92 O
ATOM 6 C5' U B 271 64.884 102.790 -10.953 1.00144.85 C
ATOM 7 C4' U B 271 66.028 103.551 -10.313 1.00145.87 C
ATOM 8 O4' U B 271 66.800 104.212 -11.351 1.00146.37 O
ATOM 9 C3' U B 271 65.642 104.676 -9.369 1.00146.31 C
ATOM 10 O3' U B 271 65.393 104.160 -8.066 1.00146.33 O
ATOM 11 C2' U B 271 66.889 105.554 -9.391 1.00146.43 C
ATOM 12 O2' U B 271 67.934 105.045 -8.582 1.00146.44 O
ATOM 13 C1' U B 271 67.307 105.440 -10.860 1.00145.93 C
ATOM 14 N1 U B 271 66.821 106.527 -11.728 1.00144.99 N
ATOM 15 C2 U B 271 67.768 107.276 -12.408 1.00144.79 C
ATOM 16 O2 U B 271 68.970 107.059 -12.336 1.00144.87 O
ATOM 17 N3 U B 271 67.258 108.289 -13.180 1.00144.65 N
ATOM 18 C4 U B 271 65.932 108.626 -13.342 1.00144.42 C
ATOM 19 O4 U B 271 65.637 109.613 -14.018 1.00144.54 O
ATOM 20 C5 U B 271 65.015 107.797 -12.623 1.00143.99 C
ATOM 21 C6 U B 271 65.476 106.803 -11.861 1.00143.99 C
ATOM 22 P C B 272 64.005 103.409 -7.753 1.00146.90 P
ATOM 23 OP1 C B 272 64.299 101.948 -7.749 1.00147.05 O
ATOM 24 OP2 C B 272 62.949 103.943 -8.652 1.00146.45 O
ATOM 25 O5' C B 272 63.651 103.847 -6.264 1.00145.40 O
TER
Atoms:
OP1: (75.154,111.667,-10.990)
OP2: (72.670,111.875,-11.629)
C3': (72.931,107.549,-8.489)
C1': (70.825,108.604,-8.436)
C5': (73.981,109.907,-8.620)
O6: (65.880,111.272,-10.540)
O4': (71.735,109.501,-7.834)
C8: (70.024,110.160,-10.280)
C2: (66.584,109.132,-7.788)
C6: (66.556,110.572,-9.773)
C5: (67.950,110.294,-9.819)
C4: (68.493,109.470,-8.856)
P: (73.721,111.628,-10.601)
C4': (73.078,108.943,-7.884)
C2': (71.661,107.684,-9.323)
O2': (70.994,106.453,-9.543)
N1: (65.944,109.935,-8.699)
N2: (65.819,108.611,-6.820)
N3: (67.876,108.861,-7.822)
N7: (68.927,110.724,-10.708)
N9: (69.828,109.382,-9.162)
O5': (73.436,110.217,-9.917)
O3': (72.697,106.628,-7.431)
OP2: (72.670,111.875,-11.629)
C3': (72.931,107.549,-8.489)
C1': (70.825,108.604,-8.436)
C5': (73.981,109.907,-8.620)
O6: (65.880,111.272,-10.540)
O4': (71.735,109.501,-7.834)
C8: (70.024,110.160,-10.280)
C2: (66.584,109.132,-7.788)
C6: (66.556,110.572,-9.773)
C5: (67.950,110.294,-9.819)
C4: (68.493,109.470,-8.856)
P: (73.721,111.628,-10.601)
C4': (73.078,108.943,-7.884)
C2': (71.661,107.684,-9.323)
O2': (70.994,106.453,-9.543)
N1: (65.944,109.935,-8.699)
N2: (65.819,108.611,-6.820)
N3: (67.876,108.861,-7.822)
N7: (68.927,110.724,-10.708)
N9: (69.828,109.382,-9.162)
O5': (73.436,110.217,-9.917)
O3': (72.697,106.628,-7.431)
C4: (65.932,108.626,-13.342)
N3: (67.258,108.289,-13.180)
OP1: (62.713,102.197,-13.454)
OP2: (64.620,103.433,-14.641)
C2: (67.768,107.276,-12.408)
C1': (67.307,105.440,-10.860)
C3': (65.642,104.676,-9.369)
O5': (64.431,103.463,-12.152)
O4': (66.800,104.212,-11.351)
C5': (64.884,102.790,-10.953)
P: (64.131,102.639,-13.487)
C4': (66.028,103.551,-10.313)
C2': (66.889,105.554,-9.391)
O2': (67.934,105.045,-8.582)
N1: (66.821,106.527,-11.728)
O4: (65.637,109.613,-14.018)
O2: (68.970,107.059,-12.336)
C6: (65.476,106.803,-11.861)
C5: (65.015,107.797,-12.623)
O3': (65.393,104.160,-8.066)
N3: (67.258,108.289,-13.180)
OP1: (62.713,102.197,-13.454)
OP2: (64.620,103.433,-14.641)
C2: (67.768,107.276,-12.408)
C1': (67.307,105.440,-10.860)
C3': (65.642,104.676,-9.369)
O5': (64.431,103.463,-12.152)
O4': (66.800,104.212,-11.351)
C5': (64.884,102.790,-10.953)
P: (64.131,102.639,-13.487)
C4': (66.028,103.551,-10.313)
C2': (66.889,105.554,-9.391)
O2': (67.934,105.045,-8.582)
N1: (66.821,106.527,-11.728)
O4: (65.637,109.613,-14.018)
O2: (68.970,107.059,-12.336)
C6: (65.476,106.803,-11.861)
C5: (65.015,107.797,-12.623)
O3': (65.393,104.160,-8.066)
Image (generated by PyMOL):