ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CXC:0592:0536

Extra

PDB:
ATOM 1 O3' A A 591 -5.336 134.958 88.879 1.00100.84 O
ATOM 2 P G A 592 -4.665 135.815 90.076 1.00101.93 P
ATOM 3 OP1 G A 592 -5.537 135.736 91.279 1.00102.65 O
ATOM 4 OP2 G A 592 -4.308 137.144 89.524 1.00102.01 O
ATOM 5 O5' G A 592 -3.294 135.052 90.374 1.00100.62 O
ATOM 6 C5' G A 592 -2.302 135.613 91.267 1.00 95.15 C
ATOM 7 C4' G A 592 -1.449 134.513 91.868 1.00 91.96 C
ATOM 8 O4' G A 592 -0.723 133.804 90.828 1.00 89.89 O
ATOM 9 C3' G A 592 -0.404 134.980 92.881 1.00 90.62 C
ATOM 10 O3' G A 592 -0.200 134.006 93.905 1.00 89.81 O
ATOM 11 C2' G A 592 0.885 134.976 92.071 1.00 89.85 C
ATOM 12 O2' G A 592 2.015 134.756 92.891 1.00 90.40 O
ATOM 13 C1' G A 592 0.652 133.781 91.149 1.00 88.40 C
ATOM 14 N9 G A 592 1.422 133.790 89.910 1.00 85.58 N
ATOM 15 C8 G A 592 1.725 134.874 89.124 1.00 84.59 C
ATOM 16 N7 G A 592 2.404 134.559 88.055 1.00 84.54 N
ATOM 17 C5 G A 592 2.567 133.183 88.142 1.00 83.43 C
ATOM 18 C6 G A 592 3.213 132.282 87.263 1.00 82.09 C
ATOM 19 O6 G A 592 3.795 132.530 86.195 1.00 80.10 O
ATOM 20 N1 G A 592 3.137 130.974 87.731 1.00 81.86 N
ATOM 21 C2 G A 592 2.521 130.581 88.895 1.00 82.20 C
ATOM 22 N2 G A 592 2.541 129.269 89.166 1.00 82.53 N
ATOM 23 N3 G A 592 1.922 131.414 89.729 1.00 82.58 N
ATOM 24 C4 G A 592 1.977 132.692 89.289 1.00 83.88 C
ATOM 25 P C A 593 -1.449 133.344 94.663 1.00 87.86 P
ATOM 26 OP1 C A 593 -2.553 134.334 94.678 1.00 88.06 O
ATOM 27 OP2 C A 593 -0.931 132.812 95.949 1.00 86.45 O
ATOM 28 O5' C A 593 -1.861 132.129 93.708 1.00 84.87 O
TER

ATOM 1 O3' A B 535 6.183 139.902 92.346 1.00 74.34 O
ATOM 2 P U B 536 4.788 139.793 91.560 1.00 73.75 P
ATOM 3 OP1 U B 536 4.397 141.194 91.271 1.00 72.85 O
ATOM 4 OP2 U B 536 3.873 138.913 92.327 1.00 72.07 O
ATOM 5 O5' U B 536 5.177 139.077 90.190 1.00 72.37 O
ATOM 6 C5' U B 536 6.179 139.653 89.330 1.00 70.21 C
ATOM 7 C4' U B 536 6.384 138.796 88.111 1.00 70.86 C
ATOM 8 O4' U B 536 6.791 137.468 88.534 1.00 69.82 O
ATOM 9 C3' U B 536 5.177 138.615 87.189 1.00 70.94 C
ATOM 10 O3' U B 536 5.642 138.562 85.834 1.00 74.76 O
ATOM 11 C2' U B 536 4.652 137.235 87.582 1.00 69.71 C
ATOM 12 O2' U B 536 3.983 136.575 86.528 1.00 68.60 O
ATOM 13 C1' U B 536 5.951 136.511 87.932 1.00 68.25 C
ATOM 14 N1 U B 536 5.807 135.365 88.838 1.00 66.11 N
ATOM 15 C2 U B 536 6.055 134.112 88.310 1.00 64.87 C
ATOM 16 O2 U B 536 6.420 133.939 87.167 1.00 66.58 O
ATOM 17 N3 U B 536 5.867 133.069 89.172 1.00 64.31 N
ATOM 18 C4 U B 536 5.477 133.149 90.489 1.00 66.29 C
ATOM 19 O4 U B 536 5.317 132.110 91.133 1.00 68.20 O
ATOM 20 C5 U B 536 5.264 134.484 90.975 1.00 65.55 C
ATOM 21 C6 U B 536 5.432 135.521 90.151 1.00 65.54 C
ATOM 22 P A B 537 5.159 139.661 84.757 1.00 77.78 P
ATOM 23 OP1 A B 537 6.222 139.738 83.720 1.00 77.15 O
ATOM 24 OP2 A B 537 4.746 140.905 85.475 1.00 75.89 O
ATOM 25 O5' A B 537 3.882 138.999 84.063 1.00 77.40 O
TER

Atoms:
OP1: (-5.537,135.736,91.279)
OP2: (-4.308,137.144,89.524)
C3': (-0.404,134.980,92.881)
C1': (0.652,133.781,91.149)
C5': (-2.302,135.613,91.267)
O6: (3.795,132.530,86.195)
O4': (-0.723,133.804,90.828)
C8: (1.725,134.874,89.124)
C2: (2.521,130.581,88.895)
C6: (3.213,132.282,87.263)
C5: (2.567,133.183,88.142)
C4: (1.977,132.692,89.289)
P: (-4.665,135.815,90.076)
C4': (-1.449,134.513,91.868)
C2': (0.885,134.976,92.071)
O2': (2.015,134.756,92.891)
N1: (3.137,130.974,87.731)
N2: (2.541,129.269,89.166)
N3: (1.922,131.414,89.729)
N7: (2.404,134.559,88.055)
N9: (1.422,133.790,89.910)
O5': (-3.294,135.052,90.374)
O3': (-0.200,134.006,93.905)
C4: (5.477,133.149,90.489)
N3: (5.867,133.069,89.172)
OP1: (4.397,141.194,91.271)
OP2: (3.873,138.913,92.327)
C2: (6.055,134.112,88.310)
C1': (5.951,136.511,87.932)
C3': (5.177,138.615,87.189)
O5': (5.177,139.077,90.190)
O4': (6.791,137.468,88.534)
C5': (6.179,139.653,89.330)
P: (4.788,139.793,91.560)
C4': (6.384,138.796,88.111)
C2': (4.652,137.235,87.582)
O2': (3.983,136.575,86.528)
N1: (5.807,135.365,88.838)
O4: (5.317,132.110,91.133)
O2: (6.420,133.939,87.167)
C6: (5.432,135.521,90.151)
C5: (5.264,134.484,90.975)
O3': (5.642,138.562,85.834)
Image (generated by PyMOL):
PyMOL image
show in jmol