ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1Q81:A355:A271

Extra

PDB:
ATOM 1 O3' U A 354 74.430 112.249 -8.663 1.00107.46 O
ATOM 2 P G A 355 74.614 111.184 -9.864 1.00107.75 P
ATOM 3 OP1 G A 355 76.033 111.286 -10.305 1.00107.20 O
ATOM 4 OP2 G A 355 73.517 111.370 -10.854 1.00108.42 O
ATOM 5 O5' G A 355 74.425 109.761 -9.177 1.00107.26 O
ATOM 6 C5' G A 355 74.982 109.492 -7.886 1.00108.41 C
ATOM 7 C4' G A 355 74.046 108.613 -7.096 1.00109.28 C
ATOM 8 O4' G A 355 72.722 109.219 -7.143 1.00109.06 O
ATOM 9 C3' G A 355 73.879 107.184 -7.611 1.00109.93 C
ATOM 10 O3' G A 355 73.658 106.297 -6.518 1.00111.44 O
ATOM 11 C2' G A 355 72.630 107.280 -8.481 1.00109.60 C
ATOM 12 O2' G A 355 71.930 106.054 -8.597 1.00109.03 O
ATOM 13 C1' G A 355 71.802 108.314 -7.718 1.00108.83 C
ATOM 14 N9 G A 355 70.897 109.070 -8.580 1.00108.10 N
ATOM 15 C8 G A 355 71.223 109.807 -9.699 1.00108.00 C
ATOM 16 N7 G A 355 70.184 110.352 -10.274 1.00108.04 N
ATOM 17 C5 G A 355 69.109 109.958 -9.485 1.00107.46 C
ATOM 18 C6 G A 355 67.720 110.236 -9.610 1.00106.83 C
ATOM 19 O6 G A 355 67.141 110.909 -10.474 1.00106.88 O
ATOM 20 N1 G A 355 66.986 109.635 -8.591 1.00105.86 N
ATOM 21 C2 G A 355 67.516 108.867 -7.580 1.00105.20 C
ATOM 22 N2 G A 355 66.654 108.379 -6.685 1.00103.98 N
ATOM 23 N3 G A 355 68.801 108.598 -7.455 1.00105.69 N
ATOM 24 C4 G A 355 69.535 109.171 -8.433 1.00107.29 C
ATOM 25 P C A 356 74.515 104.935 -6.402 1.00112.42 P
ATOM 26 OP1 C A 356 75.803 105.237 -5.716 1.00111.86 O
ATOM 27 OP2 C A 356 74.532 104.282 -7.735 1.00112.79 O
ATOM 28 O5' C A 356 73.646 104.028 -5.423 1.00112.69 O
TER

ATOM 1 O3' C B 270 65.704 100.860 -12.461 1.00138.11 O
ATOM 2 P U B 271 64.816 102.204 -12.600 1.00139.01 P
ATOM 3 OP1 U B 271 63.391 101.802 -12.507 1.00138.18 O
ATOM 4 OP2 U B 271 65.279 102.989 -13.775 1.00139.01 O
ATOM 5 O5' U B 271 65.160 103.028 -11.279 1.00140.70 O
ATOM 6 C5' U B 271 65.758 102.366 -10.146 1.00142.55 C
ATOM 7 C4' U B 271 66.825 103.235 -9.516 1.00143.29 C
ATOM 8 O4' U B 271 67.602 103.889 -10.556 1.00143.56 O
ATOM 9 C3' U B 271 66.302 104.379 -8.667 1.00143.51 C
ATOM 10 O3' U B 271 65.973 103.917 -7.352 1.00143.42 O
ATOM 11 C2' U B 271 67.488 105.342 -8.671 1.00143.70 C
ATOM 12 O2' U B 271 68.504 104.972 -7.755 1.00143.44 O
ATOM 13 C1' U B 271 68.020 105.164 -10.100 1.00143.47 C
ATOM 14 N1 U B 271 67.601 106.180 -11.085 1.00143.11 N
ATOM 15 C2 U B 271 68.602 106.868 -11.756 1.00143.18 C
ATOM 16 O2 U B 271 69.793 106.648 -11.581 1.00143.20 O
ATOM 17 N3 U B 271 68.162 107.820 -12.648 1.00143.18 N
ATOM 18 C4 U B 271 66.854 108.147 -12.938 1.00142.65 C
ATOM 19 O4 U B 271 66.621 109.065 -13.729 1.00141.82 O
ATOM 20 C5 U B 271 65.877 107.386 -12.218 1.00142.39 C
ATOM 21 C6 U B 271 66.271 106.453 -11.339 1.00142.45 C
ATOM 22 P C B 272 64.810 102.810 -7.156 1.00143.79 P
ATOM 23 OP1 C B 272 65.490 101.485 -7.084 1.00143.67 O
ATOM 24 OP2 C B 272 63.744 103.033 -8.173 1.00144.00 O
ATOM 25 O5' C B 272 64.181 103.122 -5.724 1.00142.08 O
TER

Atoms:
OP1: (76.033,111.286,-10.305)
OP2: (73.517,111.370,-10.854)
C3': (73.879,107.184,-7.611)
C1': (71.802,108.314,-7.718)
C5': (74.982,109.492,-7.886)
O6: (67.141,110.909,-10.474)
O4': (72.722,109.219,-7.143)
C8: (71.223,109.807,-9.699)
C2: (67.516,108.867,-7.580)
C6: (67.720,110.236,-9.610)
C5: (69.109,109.958,-9.485)
C4: (69.535,109.171,-8.433)
P: (74.614,111.184,-9.864)
C4': (74.046,108.613,-7.096)
C2': (72.630,107.280,-8.481)
O2': (71.930,106.054,-8.597)
N1: (66.986,109.635,-8.591)
N2: (66.654,108.379,-6.685)
N3: (68.801,108.598,-7.455)
N7: (70.184,110.352,-10.274)
N9: (70.897,109.070,-8.580)
O5': (74.425,109.761,-9.177)
O3': (73.658,106.297,-6.518)
C4: (66.854,108.147,-12.938)
N3: (68.162,107.820,-12.648)
OP1: (63.391,101.802,-12.507)
OP2: (65.279,102.989,-13.775)
C2: (68.602,106.868,-11.756)
C1': (68.020,105.164,-10.100)
C3': (66.302,104.379,-8.667)
O5': (65.160,103.028,-11.279)
O4': (67.602,103.889,-10.556)
C5': (65.758,102.366,-10.146)
P: (64.816,102.204,-12.600)
C4': (66.825,103.235,-9.516)
C2': (67.488,105.342,-8.671)
O2': (68.504,104.972,-7.755)
N1: (67.601,106.180,-11.085)
O4: (66.621,109.065,-13.729)
O2: (69.793,106.648,-11.581)
C6: (66.271,106.453,-11.339)
C5: (65.877,107.386,-12.218)
O3': (65.973,103.917,-7.352)
Image (generated by PyMOL):
PyMOL image
show in jmol