Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:A16:A18
Extra
PDB:
ATOM 1 O3' C A 15 24.823 -62.830 23.567 1.00103.36 O
ATOM 2 P G A 16 26.234 -62.318 23.010 1.00103.38 P
ATOM 3 OP1 G A 16 27.296 -62.992 23.791 1.00105.23 O
ATOM 4 OP2 G A 16 26.211 -60.836 22.950 1.00100.94 O
ATOM 5 O5' G A 16 26.234 -62.881 21.507 1.00103.64 O
ATOM 6 C5' G A 16 26.330 -64.288 21.269 1.00105.54 C
ATOM 7 C4' G A 16 25.881 -64.675 19.869 1.00105.18 C
ATOM 8 O4' G A 16 24.587 -64.098 19.563 1.00103.50 O
ATOM 9 C3' G A 16 26.748 -64.188 18.718 1.00104.07 C
ATOM 10 O3' G A 16 27.971 -64.924 18.608 1.00105.65 O
ATOM 11 C2' G A 16 25.796 -64.416 17.548 1.00103.85 C
ATOM 12 O2' G A 16 25.747 -65.760 17.115 1.00106.10 O
ATOM 13 C1' G A 16 24.454 -64.004 18.153 1.00102.83 C
ATOM 14 N9 G A 16 24.062 -62.645 17.770 1.00100.24 N
ATOM 15 C8 G A 16 24.207 -61.493 18.510 1.00 98.62 C
ATOM 16 N7 G A 16 23.771 -60.420 17.907 1.00 96.47 N
ATOM 17 C5 G A 16 23.309 -60.885 16.682 1.00 96.75 C
ATOM 18 C6 G A 16 22.721 -60.181 15.597 1.00 95.31 C
ATOM 19 O6 G A 16 22.490 -58.968 15.505 1.00 93.51 O
ATOM 20 N1 G A 16 22.392 -61.026 14.537 1.00 96.31 N
ATOM 21 C2 G A 16 22.607 -62.386 14.530 1.00 98.39 C
ATOM 22 N2 G A 16 22.227 -63.039 13.424 1.00 99.28 N
ATOM 23 N3 G A 16 23.154 -63.059 15.538 1.00 99.73 N
ATOM 24 C4 G A 16 23.481 -62.251 16.581 1.00 98.97 C
ATOM 25 P U A 17 29.345 -64.159 18.272 1.00105.10 P
ATOM 26 OP1 U A 17 29.329 -63.788 16.840 1.00104.18 O
ATOM 27 OP2 U A 17 30.472 -64.964 18.792 1.00107.17 O
ATOM 28 O5' U A 17 29.225 -62.798 19.110 1.00102.87 O
TER
ATOM 1 O3' U B 17 30.986 -59.270 20.690 1.00 95.61 O
ATOM 2 P U B 18 30.090 -57.964 20.917 1.00 92.22 P
ATOM 3 OP1 U B 18 30.992 -56.906 21.427 1.00 91.44 O
ATOM 4 OP2 U B 18 28.890 -58.346 21.696 1.00 92.67 O
ATOM 5 O5' U B 18 29.642 -57.573 19.433 1.00 89.94 O
ATOM 6 C5' U B 18 30.120 -56.389 18.805 1.00 86.52 C
ATOM 7 C4' U B 18 29.025 -55.721 17.991 1.00 83.81 C
ATOM 8 O4' U B 18 28.606 -56.573 16.894 1.00 84.55 O
ATOM 9 C3' U B 18 27.752 -55.360 18.748 1.00 82.39 C
ATOM 10 O3' U B 18 27.268 -54.125 18.244 1.00 79.12 O
ATOM 11 C2' U B 18 26.797 -56.512 18.424 1.00 83.64 C
ATOM 12 O2' U B 18 25.442 -56.115 18.442 1.00 82.37 O
ATOM 13 C1' U B 18 27.227 -56.882 17.003 1.00 84.42 C
ATOM 14 N1 U B 18 27.059 -58.322 16.603 1.00 86.38 N
ATOM 15 C2 U B 18 26.234 -58.645 15.536 1.00 86.89 C
ATOM 16 O2 U B 18 25.602 -57.828 14.889 1.00 86.25 O
ATOM 17 N3 U B 18 26.158 -59.985 15.244 1.00 88.85 N
ATOM 18 C4 U B 18 26.814 -61.017 15.892 1.00 90.61 C
ATOM 19 O4 U B 18 26.649 -62.170 15.512 1.00 92.26 O
ATOM 20 C5 U B 18 27.660 -60.608 16.987 1.00 90.37 C
ATOM 21 C6 U B 18 27.750 -59.305 17.292 1.00 88.19 C
ATOM 22 P U B 19 27.840 -52.720 18.752 1.00 76.37 P
ATOM 23 OP1 U B 19 29.285 -52.617 18.445 1.00 76.18 O
ATOM 24 OP2 U B 19 27.370 -52.512 20.140 1.00 77.02 O
ATOM 25 O5' U B 19 27.029 -51.723 17.807 1.00 73.47 O
TER
ATOM 2 P G A 16 26.234 -62.318 23.010 1.00103.38 P
ATOM 3 OP1 G A 16 27.296 -62.992 23.791 1.00105.23 O
ATOM 4 OP2 G A 16 26.211 -60.836 22.950 1.00100.94 O
ATOM 5 O5' G A 16 26.234 -62.881 21.507 1.00103.64 O
ATOM 6 C5' G A 16 26.330 -64.288 21.269 1.00105.54 C
ATOM 7 C4' G A 16 25.881 -64.675 19.869 1.00105.18 C
ATOM 8 O4' G A 16 24.587 -64.098 19.563 1.00103.50 O
ATOM 9 C3' G A 16 26.748 -64.188 18.718 1.00104.07 C
ATOM 10 O3' G A 16 27.971 -64.924 18.608 1.00105.65 O
ATOM 11 C2' G A 16 25.796 -64.416 17.548 1.00103.85 C
ATOM 12 O2' G A 16 25.747 -65.760 17.115 1.00106.10 O
ATOM 13 C1' G A 16 24.454 -64.004 18.153 1.00102.83 C
ATOM 14 N9 G A 16 24.062 -62.645 17.770 1.00100.24 N
ATOM 15 C8 G A 16 24.207 -61.493 18.510 1.00 98.62 C
ATOM 16 N7 G A 16 23.771 -60.420 17.907 1.00 96.47 N
ATOM 17 C5 G A 16 23.309 -60.885 16.682 1.00 96.75 C
ATOM 18 C6 G A 16 22.721 -60.181 15.597 1.00 95.31 C
ATOM 19 O6 G A 16 22.490 -58.968 15.505 1.00 93.51 O
ATOM 20 N1 G A 16 22.392 -61.026 14.537 1.00 96.31 N
ATOM 21 C2 G A 16 22.607 -62.386 14.530 1.00 98.39 C
ATOM 22 N2 G A 16 22.227 -63.039 13.424 1.00 99.28 N
ATOM 23 N3 G A 16 23.154 -63.059 15.538 1.00 99.73 N
ATOM 24 C4 G A 16 23.481 -62.251 16.581 1.00 98.97 C
ATOM 25 P U A 17 29.345 -64.159 18.272 1.00105.10 P
ATOM 26 OP1 U A 17 29.329 -63.788 16.840 1.00104.18 O
ATOM 27 OP2 U A 17 30.472 -64.964 18.792 1.00107.17 O
ATOM 28 O5' U A 17 29.225 -62.798 19.110 1.00102.87 O
TER
ATOM 1 O3' U B 17 30.986 -59.270 20.690 1.00 95.61 O
ATOM 2 P U B 18 30.090 -57.964 20.917 1.00 92.22 P
ATOM 3 OP1 U B 18 30.992 -56.906 21.427 1.00 91.44 O
ATOM 4 OP2 U B 18 28.890 -58.346 21.696 1.00 92.67 O
ATOM 5 O5' U B 18 29.642 -57.573 19.433 1.00 89.94 O
ATOM 6 C5' U B 18 30.120 -56.389 18.805 1.00 86.52 C
ATOM 7 C4' U B 18 29.025 -55.721 17.991 1.00 83.81 C
ATOM 8 O4' U B 18 28.606 -56.573 16.894 1.00 84.55 O
ATOM 9 C3' U B 18 27.752 -55.360 18.748 1.00 82.39 C
ATOM 10 O3' U B 18 27.268 -54.125 18.244 1.00 79.12 O
ATOM 11 C2' U B 18 26.797 -56.512 18.424 1.00 83.64 C
ATOM 12 O2' U B 18 25.442 -56.115 18.442 1.00 82.37 O
ATOM 13 C1' U B 18 27.227 -56.882 17.003 1.00 84.42 C
ATOM 14 N1 U B 18 27.059 -58.322 16.603 1.00 86.38 N
ATOM 15 C2 U B 18 26.234 -58.645 15.536 1.00 86.89 C
ATOM 16 O2 U B 18 25.602 -57.828 14.889 1.00 86.25 O
ATOM 17 N3 U B 18 26.158 -59.985 15.244 1.00 88.85 N
ATOM 18 C4 U B 18 26.814 -61.017 15.892 1.00 90.61 C
ATOM 19 O4 U B 18 26.649 -62.170 15.512 1.00 92.26 O
ATOM 20 C5 U B 18 27.660 -60.608 16.987 1.00 90.37 C
ATOM 21 C6 U B 18 27.750 -59.305 17.292 1.00 88.19 C
ATOM 22 P U B 19 27.840 -52.720 18.752 1.00 76.37 P
ATOM 23 OP1 U B 19 29.285 -52.617 18.445 1.00 76.18 O
ATOM 24 OP2 U B 19 27.370 -52.512 20.140 1.00 77.02 O
ATOM 25 O5' U B 19 27.029 -51.723 17.807 1.00 73.47 O
TER
Atoms:
OP1: (27.296,-62.992,23.791)
OP2: (26.211,-60.836,22.950)
C3': (26.748,-64.188,18.718)
C1': (24.454,-64.004,18.153)
C5': (26.330,-64.288,21.269)
O6: (22.490,-58.968,15.505)
O4': (24.587,-64.098,19.563)
C8: (24.207,-61.493,18.510)
C2: (22.607,-62.386,14.530)
C6: (22.721,-60.181,15.597)
C5: (23.309,-60.885,16.682)
C4: (23.481,-62.251,16.581)
P: (26.234,-62.318,23.010)
C4': (25.881,-64.675,19.869)
C2': (25.796,-64.416,17.548)
O2': (25.747,-65.760,17.115)
N1: (22.392,-61.026,14.537)
N2: (22.227,-63.039,13.424)
N3: (23.154,-63.059,15.538)
N7: (23.771,-60.420,17.907)
N9: (24.062,-62.645,17.770)
O5': (26.234,-62.881,21.507)
O3': (27.971,-64.924,18.608)
OP2: (26.211,-60.836,22.950)
C3': (26.748,-64.188,18.718)
C1': (24.454,-64.004,18.153)
C5': (26.330,-64.288,21.269)
O6: (22.490,-58.968,15.505)
O4': (24.587,-64.098,19.563)
C8: (24.207,-61.493,18.510)
C2: (22.607,-62.386,14.530)
C6: (22.721,-60.181,15.597)
C5: (23.309,-60.885,16.682)
C4: (23.481,-62.251,16.581)
P: (26.234,-62.318,23.010)
C4': (25.881,-64.675,19.869)
C2': (25.796,-64.416,17.548)
O2': (25.747,-65.760,17.115)
N1: (22.392,-61.026,14.537)
N2: (22.227,-63.039,13.424)
N3: (23.154,-63.059,15.538)
N7: (23.771,-60.420,17.907)
N9: (24.062,-62.645,17.770)
O5': (26.234,-62.881,21.507)
O3': (27.971,-64.924,18.608)
C4: (26.814,-61.017,15.892)
N3: (26.158,-59.985,15.244)
OP1: (30.992,-56.906,21.427)
OP2: (28.890,-58.346,21.696)
C2: (26.234,-58.645,15.536)
C1': (27.227,-56.882,17.003)
C3': (27.752,-55.360,18.748)
O5': (29.642,-57.573,19.433)
O4': (28.606,-56.573,16.894)
C5': (30.120,-56.389,18.805)
P: (30.090,-57.964,20.917)
C4': (29.025,-55.721,17.991)
C2': (26.797,-56.512,18.424)
O2': (25.442,-56.115,18.442)
N1: (27.059,-58.322,16.603)
O4: (26.649,-62.170,15.512)
O2: (25.602,-57.828,14.889)
C6: (27.750,-59.305,17.292)
C5: (27.660,-60.608,16.987)
O3': (27.268,-54.125,18.244)
N3: (26.158,-59.985,15.244)
OP1: (30.992,-56.906,21.427)
OP2: (28.890,-58.346,21.696)
C2: (26.234,-58.645,15.536)
C1': (27.227,-56.882,17.003)
C3': (27.752,-55.360,18.748)
O5': (29.642,-57.573,19.433)
O4': (28.606,-56.573,16.894)
C5': (30.120,-56.389,18.805)
P: (30.090,-57.964,20.917)
C4': (29.025,-55.721,17.991)
C2': (26.797,-56.512,18.424)
O2': (25.442,-56.115,18.442)
N1: (27.059,-58.322,16.603)
O4: (26.649,-62.170,15.512)
O2: (25.602,-57.828,14.889)
C6: (27.750,-59.305,17.292)
C5: (27.660,-60.608,16.987)
O3': (27.268,-54.125,18.244)
Image (generated by PyMOL):