Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A219:A426
Extra
PDB:
ATOM 1 O3' A A 218 -67.904 -52.057 76.447 1.00 0.04 O
ATOM 2 P G A 219 -67.587 -50.874 77.496 1.00 0.01 P
ATOM 3 OP1 G A 219 -68.588 -49.801 77.264 1.00 0.01 O
ATOM 4 OP2 G A 219 -66.141 -50.540 77.348 1.00 0.01 O
ATOM 5 O5' G A 219 -67.845 -51.581 78.905 1.00 0.01 O
ATOM 6 C5' G A 219 -69.042 -52.310 79.142 1.00 0.01 C
ATOM 7 C4' G A 219 -68.845 -53.429 80.138 1.00 0.01 C
ATOM 8 O4' G A 219 -68.039 -54.463 79.549 1.00 0.01 O
ATOM 9 C3' G A 219 -68.121 -53.080 81.429 1.00 0.01 C
ATOM 10 O3' G A 219 -68.977 -52.540 82.403 1.00 0.01 O
ATOM 11 C2' G A 219 -67.567 -54.416 81.854 1.00 0.01 C
ATOM 12 O2' G A 219 -68.584 -55.204 82.461 1.00 0.01 O
ATOM 13 C1' G A 219 -67.200 -55.033 80.521 1.00 0.01 C
ATOM 14 N9 G A 219 -65.807 -54.750 80.151 1.00 0.01 N
ATOM 15 C8 G A 219 -65.381 -53.740 79.333 1.00 0.01 C
ATOM 16 N7 G A 219 -64.097 -53.716 79.168 1.00 0.01 N
ATOM 17 C5 G A 219 -63.646 -54.790 79.920 1.00 0.01 C
ATOM 18 C6 G A 219 -62.316 -55.264 80.123 1.00 0.01 C
ATOM 19 O6 G A 219 -61.236 -54.822 79.669 1.00 0.01 O
ATOM 20 N1 G A 219 -62.344 -56.379 80.965 1.00 0.01 N
ATOM 21 C2 G A 219 -63.468 -56.933 81.525 1.00 0.01 C
ATOM 22 N2 G A 219 -63.259 -58.001 82.296 1.00 0.01 N
ATOM 23 N3 G A 219 -64.692 -56.499 81.340 1.00 0.01 N
ATOM 24 C4 G A 219 -64.700 -55.437 80.533 1.00 0.01 C
ATOM 25 P A A 220 -68.893 -51.004 82.811 1.00 0.09 P
ATOM 26 OP1 A A 220 -70.197 -50.389 82.430 1.00 0.09 O
ATOM 27 OP2 A A 220 -67.641 -50.457 82.251 1.00 0.09 O
ATOM 28 O5' A A 220 -68.773 -51.075 84.376 1.00 0.09 O
TER
ATOM 1 O3' C B 425 -56.945 -51.637 81.937 1.00 3.69 O
ATOM 2 P U B 426 -57.459 -52.804 80.987 1.00 3.54 P
ATOM 3 OP1 U B 426 -56.281 -53.401 80.335 1.00 3.54 O
ATOM 4 OP2 U B 426 -58.546 -52.225 80.117 1.00 3.54 O
ATOM 5 O5' U B 426 -58.064 -53.836 82.040 1.00 3.54 O
ATOM 6 C5' U B 426 -57.203 -54.615 82.844 1.00 3.54 C
ATOM 7 C4' U B 426 -57.962 -55.613 83.674 1.00 3.54 C
ATOM 8 O4' U B 426 -58.925 -54.923 84.495 1.00 3.54 O
ATOM 9 C3' U B 426 -58.799 -56.631 82.922 1.00 3.54 C
ATOM 10 O3' U B 426 -58.038 -57.705 82.416 1.00 3.54 O
ATOM 11 C2' U B 426 -59.817 -57.052 83.968 1.00 3.54 C
ATOM 12 O2' U B 426 -59.230 -57.929 84.916 1.00 3.54 O
ATOM 13 C1' U B 426 -60.085 -55.721 84.655 1.00 3.54 C
ATOM 14 N1 U B 426 -61.242 -54.995 84.062 1.00 3.60 N
ATOM 15 C2 U B 426 -62.525 -55.341 84.466 1.00 3.60 C
ATOM 16 O2 U B 426 -62.765 -56.234 85.260 1.00 3.60 O
ATOM 17 N3 U B 426 -63.511 -54.617 83.873 1.00 3.60 N
ATOM 18 C4 U B 426 -63.330 -53.607 82.968 1.00 3.60 C
ATOM 19 O4 U B 426 -64.311 -53.030 82.519 1.00 3.60 O
ATOM 20 C5 U B 426 -61.987 -53.303 82.612 1.00 3.60 C
ATOM 21 C6 U B 426 -61.008 -53.991 83.157 1.00 3.60 C
ATOM 22 P A B 427 -58.417 -58.343 80.989 1.00 1.59 P
ATOM 23 OP1 A B 427 -57.252 -58.068 80.066 1.00 1.59 O
ATOM 24 OP2 A B 427 -59.788 -57.832 80.626 1.00 1.59 O
ATOM 25 O5' A B 427 -58.506 -59.894 81.300 1.00 1.59 O
TER
ATOM 2 P G A 219 -67.587 -50.874 77.496 1.00 0.01 P
ATOM 3 OP1 G A 219 -68.588 -49.801 77.264 1.00 0.01 O
ATOM 4 OP2 G A 219 -66.141 -50.540 77.348 1.00 0.01 O
ATOM 5 O5' G A 219 -67.845 -51.581 78.905 1.00 0.01 O
ATOM 6 C5' G A 219 -69.042 -52.310 79.142 1.00 0.01 C
ATOM 7 C4' G A 219 -68.845 -53.429 80.138 1.00 0.01 C
ATOM 8 O4' G A 219 -68.039 -54.463 79.549 1.00 0.01 O
ATOM 9 C3' G A 219 -68.121 -53.080 81.429 1.00 0.01 C
ATOM 10 O3' G A 219 -68.977 -52.540 82.403 1.00 0.01 O
ATOM 11 C2' G A 219 -67.567 -54.416 81.854 1.00 0.01 C
ATOM 12 O2' G A 219 -68.584 -55.204 82.461 1.00 0.01 O
ATOM 13 C1' G A 219 -67.200 -55.033 80.521 1.00 0.01 C
ATOM 14 N9 G A 219 -65.807 -54.750 80.151 1.00 0.01 N
ATOM 15 C8 G A 219 -65.381 -53.740 79.333 1.00 0.01 C
ATOM 16 N7 G A 219 -64.097 -53.716 79.168 1.00 0.01 N
ATOM 17 C5 G A 219 -63.646 -54.790 79.920 1.00 0.01 C
ATOM 18 C6 G A 219 -62.316 -55.264 80.123 1.00 0.01 C
ATOM 19 O6 G A 219 -61.236 -54.822 79.669 1.00 0.01 O
ATOM 20 N1 G A 219 -62.344 -56.379 80.965 1.00 0.01 N
ATOM 21 C2 G A 219 -63.468 -56.933 81.525 1.00 0.01 C
ATOM 22 N2 G A 219 -63.259 -58.001 82.296 1.00 0.01 N
ATOM 23 N3 G A 219 -64.692 -56.499 81.340 1.00 0.01 N
ATOM 24 C4 G A 219 -64.700 -55.437 80.533 1.00 0.01 C
ATOM 25 P A A 220 -68.893 -51.004 82.811 1.00 0.09 P
ATOM 26 OP1 A A 220 -70.197 -50.389 82.430 1.00 0.09 O
ATOM 27 OP2 A A 220 -67.641 -50.457 82.251 1.00 0.09 O
ATOM 28 O5' A A 220 -68.773 -51.075 84.376 1.00 0.09 O
TER
ATOM 1 O3' C B 425 -56.945 -51.637 81.937 1.00 3.69 O
ATOM 2 P U B 426 -57.459 -52.804 80.987 1.00 3.54 P
ATOM 3 OP1 U B 426 -56.281 -53.401 80.335 1.00 3.54 O
ATOM 4 OP2 U B 426 -58.546 -52.225 80.117 1.00 3.54 O
ATOM 5 O5' U B 426 -58.064 -53.836 82.040 1.00 3.54 O
ATOM 6 C5' U B 426 -57.203 -54.615 82.844 1.00 3.54 C
ATOM 7 C4' U B 426 -57.962 -55.613 83.674 1.00 3.54 C
ATOM 8 O4' U B 426 -58.925 -54.923 84.495 1.00 3.54 O
ATOM 9 C3' U B 426 -58.799 -56.631 82.922 1.00 3.54 C
ATOM 10 O3' U B 426 -58.038 -57.705 82.416 1.00 3.54 O
ATOM 11 C2' U B 426 -59.817 -57.052 83.968 1.00 3.54 C
ATOM 12 O2' U B 426 -59.230 -57.929 84.916 1.00 3.54 O
ATOM 13 C1' U B 426 -60.085 -55.721 84.655 1.00 3.54 C
ATOM 14 N1 U B 426 -61.242 -54.995 84.062 1.00 3.60 N
ATOM 15 C2 U B 426 -62.525 -55.341 84.466 1.00 3.60 C
ATOM 16 O2 U B 426 -62.765 -56.234 85.260 1.00 3.60 O
ATOM 17 N3 U B 426 -63.511 -54.617 83.873 1.00 3.60 N
ATOM 18 C4 U B 426 -63.330 -53.607 82.968 1.00 3.60 C
ATOM 19 O4 U B 426 -64.311 -53.030 82.519 1.00 3.60 O
ATOM 20 C5 U B 426 -61.987 -53.303 82.612 1.00 3.60 C
ATOM 21 C6 U B 426 -61.008 -53.991 83.157 1.00 3.60 C
ATOM 22 P A B 427 -58.417 -58.343 80.989 1.00 1.59 P
ATOM 23 OP1 A B 427 -57.252 -58.068 80.066 1.00 1.59 O
ATOM 24 OP2 A B 427 -59.788 -57.832 80.626 1.00 1.59 O
ATOM 25 O5' A B 427 -58.506 -59.894 81.300 1.00 1.59 O
TER
Atoms:
OP1: (-68.588,-49.801,77.264)
OP2: (-66.141,-50.540,77.348)
C3': (-68.121,-53.080,81.429)
C1': (-67.200,-55.033,80.521)
C5': (-69.042,-52.310,79.142)
O6: (-61.236,-54.822,79.669)
O4': (-68.039,-54.463,79.549)
C8: (-65.381,-53.740,79.333)
C2: (-63.468,-56.933,81.525)
C6: (-62.316,-55.264,80.123)
C5: (-63.646,-54.790,79.920)
C4: (-64.700,-55.437,80.533)
P: (-67.587,-50.874,77.496)
C4': (-68.845,-53.429,80.138)
C2': (-67.567,-54.416,81.854)
O2': (-68.584,-55.204,82.461)
N1: (-62.344,-56.379,80.965)
N2: (-63.259,-58.001,82.296)
N3: (-64.692,-56.499,81.340)
N7: (-64.097,-53.716,79.168)
N9: (-65.807,-54.750,80.151)
O5': (-67.845,-51.581,78.905)
O3': (-68.977,-52.540,82.403)
OP2: (-66.141,-50.540,77.348)
C3': (-68.121,-53.080,81.429)
C1': (-67.200,-55.033,80.521)
C5': (-69.042,-52.310,79.142)
O6: (-61.236,-54.822,79.669)
O4': (-68.039,-54.463,79.549)
C8: (-65.381,-53.740,79.333)
C2: (-63.468,-56.933,81.525)
C6: (-62.316,-55.264,80.123)
C5: (-63.646,-54.790,79.920)
C4: (-64.700,-55.437,80.533)
P: (-67.587,-50.874,77.496)
C4': (-68.845,-53.429,80.138)
C2': (-67.567,-54.416,81.854)
O2': (-68.584,-55.204,82.461)
N1: (-62.344,-56.379,80.965)
N2: (-63.259,-58.001,82.296)
N3: (-64.692,-56.499,81.340)
N7: (-64.097,-53.716,79.168)
N9: (-65.807,-54.750,80.151)
O5': (-67.845,-51.581,78.905)
O3': (-68.977,-52.540,82.403)
C4: (-63.330,-53.607,82.968)
N3: (-63.511,-54.617,83.873)
OP1: (-56.281,-53.401,80.335)
OP2: (-58.546,-52.225,80.117)
C2: (-62.525,-55.341,84.466)
C1': (-60.085,-55.721,84.655)
C3': (-58.799,-56.631,82.922)
O5': (-58.064,-53.836,82.040)
O4': (-58.925,-54.923,84.495)
C5': (-57.203,-54.615,82.844)
P: (-57.459,-52.804,80.987)
C4': (-57.962,-55.613,83.674)
C2': (-59.817,-57.052,83.968)
O2': (-59.230,-57.929,84.916)
N1: (-61.242,-54.995,84.062)
O4: (-64.311,-53.030,82.519)
O2: (-62.765,-56.234,85.260)
C6: (-61.008,-53.991,83.157)
C5: (-61.987,-53.303,82.612)
O3': (-58.038,-57.705,82.416)
N3: (-63.511,-54.617,83.873)
OP1: (-56.281,-53.401,80.335)
OP2: (-58.546,-52.225,80.117)
C2: (-62.525,-55.341,84.466)
C1': (-60.085,-55.721,84.655)
C3': (-58.799,-56.631,82.922)
O5': (-58.064,-53.836,82.040)
O4': (-58.925,-54.923,84.495)
C5': (-57.203,-54.615,82.844)
P: (-57.459,-52.804,80.987)
C4': (-57.962,-55.613,83.674)
C2': (-59.817,-57.052,83.968)
O2': (-59.230,-57.929,84.916)
N1: (-61.242,-54.995,84.062)
O4: (-64.311,-53.030,82.519)
O2: (-62.765,-56.234,85.260)
C6: (-61.008,-53.991,83.157)
C5: (-61.987,-53.303,82.612)
O3': (-58.038,-57.705,82.416)
Image (generated by PyMOL):