ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:02323:02376

Extra

PDB:
ATOM 1 O3' G A2322 57.493 109.380 89.096 1.00 31.00 O
ATOM 2 P G A2323 56.089 110.052 89.499 1.00 31.29 P
ATOM 3 OP1 G A2323 55.080 108.976 89.370 1.00 32.82 O
ATOM 4 OP2 G A2323 55.883 111.344 88.795 1.00 29.44 O
ATOM 5 O5' G A2323 56.230 110.359 91.048 1.00 31.60 O
ATOM 6 C5' G A2323 57.382 111.019 91.566 1.00 32.11 C
ATOM 7 C4' G A2323 57.982 110.188 92.660 1.00 33.38 C
ATOM 8 O4' G A2323 59.143 110.880 93.189 1.00 35.58 O
ATOM 9 C3' G A2323 57.054 109.947 93.854 1.00 34.87 C
ATOM 10 O3' G A2323 57.410 108.709 94.484 1.00 34.91 O
ATOM 11 C2' G A2323 57.466 111.075 94.792 1.00 34.71 C
ATOM 12 O2' G A2323 57.188 110.833 96.150 1.00 36.24 O
ATOM 13 C1' G A2323 58.972 111.052 94.577 1.00 35.70 C
ATOM 14 N9 G A2323 59.713 112.219 95.030 1.00 36.19 N
ATOM 15 C8 G A2323 59.421 113.546 94.827 1.00 37.11 C
ATOM 16 N7 G A2323 60.263 114.347 95.419 1.00 37.73 N
ATOM 17 C5 G A2323 61.167 113.495 96.040 1.00 36.89 C
ATOM 18 C6 G A2323 62.287 113.782 96.847 1.00 36.00 C
ATOM 19 O6 G A2323 62.713 114.882 97.198 1.00 36.84 O
ATOM 20 N1 G A2323 62.930 112.620 97.262 1.00 36.30 N
ATOM 21 C2 G A2323 62.531 111.340 96.945 1.00 37.15 C
ATOM 22 N2 G A2323 63.275 110.339 97.428 1.00 36.03 N
ATOM 23 N3 G A2323 61.478 111.062 96.204 1.00 36.93 N
ATOM 24 C4 G A2323 60.848 112.180 95.789 1.00 36.75 C
ATOM 25 P A A2324 56.709 107.337 94.042 1.00 31.56 P
ATOM 26 OP1 A A2324 55.249 107.565 93.927 1.00 33.29 O
ATOM 27 OP2 A A2324 57.218 106.285 94.946 1.00 33.96 O
ATOM 28 O5' A A2324 57.288 107.050 92.590 1.00 32.57 O
TER

ATOM 1 O3' C B2375 53.149 112.157 97.670 1.00 34.86 O
ATOM 2 P U B2376 53.748 112.118 96.180 1.00 35.13 P
ATOM 3 OP1 U B2376 52.624 112.405 95.257 1.00 36.76 O
ATOM 4 OP2 U B2376 54.523 110.865 96.010 1.00 33.77 O
ATOM 5 O5' U B2376 54.733 113.374 96.134 1.00 36.98 O
ATOM 6 C5' U B2376 54.202 114.719 96.121 1.00 38.17 C
ATOM 7 C4' U B2376 55.257 115.733 96.526 1.00 39.91 C
ATOM 8 O4' U B2376 55.769 115.415 97.847 1.00 41.60 O
ATOM 9 C3' U B2376 56.510 115.845 95.669 1.00 39.01 C
ATOM 10 O3' U B2376 56.284 116.652 94.513 1.00 36.24 O
ATOM 11 C2' U B2376 57.479 116.533 96.624 1.00 39.16 C
ATOM 12 O2' U B2376 57.257 117.926 96.700 1.00 38.41 O
ATOM 13 C1' U B2376 57.100 115.891 97.963 1.00 40.28 C
ATOM 14 N1 U B2376 57.975 114.774 98.355 1.00 42.23 N
ATOM 15 C2 U B2376 59.052 115.055 99.190 1.00 42.82 C
ATOM 16 O2 U B2376 59.292 116.170 99.623 1.00 46.22 O
ATOM 17 N3 U B2376 59.844 113.981 99.496 1.00 40.25 N
ATOM 18 C4 U B2376 59.692 112.695 99.067 1.00 39.92 C
ATOM 19 O4 U B2376 60.552 111.868 99.349 1.00 41.48 O
ATOM 20 C5 U B2376 58.555 112.472 98.226 1.00 41.71 C
ATOM 21 C6 U B2376 57.754 113.493 97.907 1.00 41.42 C
ATOM 22 P C B2377 56.537 116.044 93.046 1.00 36.63 P
ATOM 23 OP1 C B2377 55.783 116.905 92.110 1.00 38.13 O
ATOM 24 OP2 C B2377 56.277 114.592 93.069 1.00 37.10 O
ATOM 25 O5' C B2377 58.095 116.226 92.770 1.00 34.34 O
TER

Atoms:
OP1: (55.080,108.976,89.370)
OP2: (55.883,111.344,88.795)
C3': (57.054,109.947,93.854)
C1': (58.972,111.052,94.577)
C5': (57.382,111.019,91.566)
O6: (62.713,114.882,97.198)
O4': (59.143,110.880,93.189)
C8: (59.421,113.546,94.827)
C2: (62.531,111.340,96.945)
C6: (62.287,113.782,96.847)
C5: (61.167,113.495,96.040)
C4: (60.848,112.180,95.789)
P: (56.089,110.052,89.499)
C4': (57.982,110.188,92.660)
C2': (57.466,111.075,94.792)
O2': (57.188,110.833,96.150)
N1: (62.930,112.620,97.262)
N2: (63.275,110.339,97.428)
N3: (61.478,111.062,96.204)
N7: (60.263,114.347,95.419)
N9: (59.713,112.219,95.030)
O5': (56.230,110.359,91.048)
O3': (57.410,108.709,94.484)
C4: (59.692,112.695,99.067)
N3: (59.844,113.981,99.496)
OP1: (52.624,112.405,95.257)
OP2: (54.523,110.865,96.010)
C2: (59.052,115.055,99.190)
C1': (57.100,115.891,97.963)
C3': (56.510,115.845,95.669)
O5': (54.733,113.374,96.134)
O4': (55.769,115.415,97.847)
C5': (54.202,114.719,96.121)
P: (53.748,112.118,96.180)
C4': (55.257,115.733,96.526)
C2': (57.479,116.533,96.624)
O2': (57.257,117.926,96.700)
N1: (57.975,114.774,98.355)
O4: (60.552,111.868,99.349)
O2: (59.292,116.170,99.623)
C6: (57.754,113.493,97.907)
C5: (58.555,112.472,98.226)
O3': (56.284,116.652,94.513)
Image (generated by PyMOL):
PyMOL image
show in jmol