ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K8A:A592:A536

Extra

PDB:
ATOM 1 O3' A A 591 -5.514 134.523 88.842 1.00 86.41 O
ATOM 2 P G A 592 -4.777 135.381 90.002 1.00 87.97 P
ATOM 3 OP1 G A 592 -5.648 135.361 91.210 1.00 87.88 O
ATOM 4 OP2 G A 592 -4.339 136.686 89.440 1.00 87.14 O
ATOM 5 O5' G A 592 -3.445 134.554 90.306 1.00 86.12 O
ATOM 6 C5' G A 592 -2.428 135.076 91.196 1.00 81.14 C
ATOM 7 C4' G A 592 -1.620 133.944 91.819 1.00 77.28 C
ATOM 8 O4' G A 592 -0.853 133.227 90.803 1.00 74.87 O
ATOM 9 C3' G A 592 -0.588 134.407 92.850 1.00 75.63 C
ATOM 10 O3' G A 592 -0.330 133.403 93.825 1.00 73.80 O
ATOM 11 C2' G A 592 0.681 134.489 92.021 1.00 75.08 C
ATOM 12 O2' G A 592 1.866 134.414 92.785 1.00 75.87 O
ATOM 13 C1' G A 592 0.522 133.246 91.154 1.00 73.71 C
ATOM 14 N9 G A 592 1.337 133.267 89.943 1.00 71.50 N
ATOM 15 C8 G A 592 1.651 134.366 89.181 1.00 70.96 C
ATOM 16 N7 G A 592 2.370 134.076 88.133 1.00 69.86 N
ATOM 17 C5 G A 592 2.556 132.703 88.209 1.00 69.29 C
ATOM 18 C6 G A 592 3.244 131.820 87.334 1.00 68.15 C
ATOM 19 O6 G A 592 3.868 132.090 86.296 1.00 66.11 O
ATOM 20 N1 G A 592 3.156 130.503 87.770 1.00 67.56 N
ATOM 21 C2 G A 592 2.498 130.087 88.900 1.00 68.52 C
ATOM 22 N2 G A 592 2.486 128.766 89.120 1.00 68.75 N
ATOM 23 N3 G A 592 1.881 130.901 89.741 1.00 69.26 N
ATOM 24 C4 G A 592 1.936 132.187 89.329 1.00 70.24 C
ATOM 25 P C A 593 -1.532 132.773 94.666 1.00 71.78 P
ATOM 26 OP1 C A 593 -2.623 133.792 94.685 1.00 71.19 O
ATOM 27 OP2 C A 593 -0.951 132.298 95.951 1.00 70.83 O
ATOM 28 O5' C A 593 -1.961 131.524 93.762 1.00 68.70 O
TER

ATOM 1 O3' A B 535 6.080 139.499 92.509 1.00 57.56 O
ATOM 2 P U B 536 4.732 139.350 91.649 1.00 57.42 P
ATOM 3 OP1 U B 536 4.299 140.716 91.258 1.00 56.92 O
ATOM 4 OP2 U B 536 3.816 138.485 92.447 1.00 57.25 O
ATOM 5 O5' U B 536 5.185 138.565 90.333 1.00 57.14 O
ATOM 6 C5' U B 536 6.145 139.141 89.430 1.00 57.76 C
ATOM 7 C4' U B 536 6.307 138.290 88.183 1.00 59.13 C
ATOM 8 O4' U B 536 6.715 136.942 88.565 1.00 57.42 O
ATOM 9 C3' U B 536 5.075 138.129 87.294 1.00 60.61 C
ATOM 10 O3' U B 536 5.473 138.018 85.913 1.00 63.75 O
ATOM 11 C2' U B 536 4.533 136.780 87.758 1.00 59.95 C
ATOM 12 O2' U B 536 3.695 136.225 86.761 1.00 60.93 O
ATOM 13 C1' U B 536 5.839 135.998 87.987 1.00 57.41 C
ATOM 14 N1 U B 536 5.783 134.812 88.867 1.00 55.27 N
ATOM 15 C2 U B 536 6.174 133.569 88.345 1.00 53.60 C
ATOM 16 O2 U B 536 6.672 133.429 87.249 1.00 53.41 O
ATOM 17 N3 U B 536 5.973 132.494 89.177 1.00 52.88 N
ATOM 18 C4 U B 536 5.469 132.518 90.460 1.00 54.69 C
ATOM 19 O4 U B 536 5.177 131.456 91.018 1.00 54.50 O
ATOM 20 C5 U B 536 5.172 133.833 90.958 1.00 56.13 C
ATOM 21 C6 U B 536 5.329 134.907 90.166 1.00 56.28 C
ATOM 22 P A B 537 5.016 139.129 84.824 1.00 66.49 P
ATOM 23 OP1 A B 537 6.091 139.160 83.794 1.00 65.58 O
ATOM 24 OP2 A B 537 4.605 140.401 85.498 1.00 65.64 O
ATOM 25 O5' A B 537 3.736 138.505 84.100 1.00 66.49 O
TER

Atoms:
OP1: (-5.648,135.361,91.210)
OP2: (-4.339,136.686,89.440)
C3': (-0.588,134.407,92.850)
C1': (0.522,133.246,91.154)
C5': (-2.428,135.076,91.196)
O6: (3.868,132.090,86.296)
O4': (-0.853,133.227,90.803)
C8: (1.651,134.366,89.181)
C2: (2.498,130.087,88.900)
C6: (3.244,131.820,87.334)
C5: (2.556,132.703,88.209)
C4: (1.936,132.187,89.329)
P: (-4.777,135.381,90.002)
C4': (-1.620,133.944,91.819)
C2': (0.681,134.489,92.021)
O2': (1.866,134.414,92.785)
N1: (3.156,130.503,87.770)
N2: (2.486,128.766,89.120)
N3: (1.881,130.901,89.741)
N7: (2.370,134.076,88.133)
N9: (1.337,133.267,89.943)
O5': (-3.445,134.554,90.306)
O3': (-0.330,133.403,93.825)
C4: (5.469,132.518,90.460)
N3: (5.973,132.494,89.177)
OP1: (4.299,140.716,91.258)
OP2: (3.816,138.485,92.447)
C2: (6.174,133.569,88.345)
C1': (5.839,135.998,87.987)
C3': (5.075,138.129,87.294)
O5': (5.185,138.565,90.333)
O4': (6.715,136.942,88.565)
C5': (6.145,139.141,89.430)
P: (4.732,139.350,91.649)
C4': (6.307,138.290,88.183)
C2': (4.533,136.780,87.758)
O2': (3.695,136.225,86.761)
N1: (5.783,134.812,88.867)
O4: (5.177,131.456,91.018)
O2: (6.672,133.429,87.249)
C6: (5.329,134.907,90.166)
C5: (5.172,133.833,90.958)
O3': (5.473,138.018,85.913)
Image (generated by PyMOL):
PyMOL image
show in jmol