Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:E20:E59
Extra
PDB:
ATOM 1 O3' A A 19 -9.469 3.763 115.965 1.00 86.06 O
ATOM 2 P G A 20 -8.224 4.473 115.238 1.00 84.42 P
ATOM 3 OP1 G A 20 -7.799 3.659 114.071 1.00 76.45 O
ATOM 4 OP2 G A 20 -7.244 4.797 116.301 1.00 77.96 O
ATOM 5 O5' G A 20 -8.844 5.835 114.687 1.00 84.41 O
ATOM 6 C5' G A 20 -9.871 5.818 113.695 1.00 79.73 C
ATOM 7 C4' G A 20 -10.232 7.226 113.284 1.00 76.67 C
ATOM 8 O4' G A 20 -10.830 7.927 114.406 1.00 76.23 O
ATOM 9 C3' G A 20 -9.062 8.102 112.878 1.00 83.22 C
ATOM 10 O3' G A 20 -8.690 7.878 111.523 1.00 85.65 O
ATOM 11 C2' G A 20 -9.614 9.501 113.115 1.00 82.22 C
ATOM 12 O2' G A 20 -10.472 9.946 112.084 1.00 80.15 O
ATOM 13 C1' G A 20 -10.422 9.285 114.394 1.00 76.26 C
ATOM 14 N9 G A 20 -9.646 9.532 115.604 1.00 75.56 N
ATOM 15 C8 G A 20 -8.898 8.619 116.309 1.00 73.88 C
ATOM 16 N7 G A 20 -8.322 9.132 117.364 1.00 77.16 N
ATOM 17 C5 G A 20 -8.710 10.466 117.353 1.00 75.75 C
ATOM 18 C6 G A 20 -8.397 11.527 118.251 1.00 74.70 C
ATOM 19 O6 G A 20 -7.695 11.497 119.269 1.00 78.23 O
ATOM 20 N1 G A 20 -9.000 12.719 117.862 1.00 73.07 N
ATOM 21 C2 G A 20 -9.800 12.875 116.757 1.00 68.93 C
ATOM 22 N2 G A 20 -10.286 14.106 116.556 1.00 67.28 N
ATOM 23 N3 G A 20 -10.101 11.898 115.914 1.00 68.03 N
ATOM 24 C4 G A 20 -9.525 10.729 116.270 1.00 73.87 C
ATOM 25 P A A 21 -7.155 8.047 111.090 1.00 79.26 P
ATOM 26 OP1 A A 21 -7.024 7.777 109.635 1.00 95.24 O
ATOM 27 OP2 A A 21 -6.334 7.273 112.056 1.00 84.21 O
ATOM 28 O5' A A 21 -6.889 9.595 111.339 1.00 82.52 O
TER
ATOM 1 O3' A B 58 -2.287 12.386 120.490 1.00 76.82 O
ATOM 2 P U B 59 -3.656 12.751 121.242 1.00 80.73 P
ATOM 3 OP1 U B 59 -3.442 12.598 122.704 1.00 87.29 O
ATOM 4 OP2 U B 59 -4.725 11.969 120.573 1.00 62.01 O
ATOM 5 O5' U B 59 -3.839 14.305 120.947 1.00 74.43 O
ATOM 6 C5' U B 59 -5.074 14.960 121.207 1.00 89.83 C
ATOM 7 C4' U B 59 -5.415 15.869 120.056 1.00 93.50 C
ATOM 8 O4' U B 59 -5.058 15.202 118.833 1.00 94.02 O
ATOM 9 C3' U B 59 -6.886 16.235 119.911 1.00 98.96 C
ATOM 10 O3' U B 59 -7.117 17.466 120.605 1.00 99.34 O
ATOM 11 C2' U B 59 -7.056 16.456 118.403 1.00 98.72 C
ATOM 12 O2' U B 59 -6.890 17.806 118.041 1.00116.91 O
ATOM 13 C1' U B 59 -5.887 15.669 117.802 1.00 90.68 C
ATOM 14 N1 U B 59 -6.152 14.573 116.863 1.00 85.38 N
ATOM 15 C2 U B 59 -6.798 14.884 115.690 1.00 81.74 C
ATOM 16 O2 U B 59 -7.227 15.994 115.456 1.00 85.32 O
ATOM 17 N3 U B 59 -6.922 13.846 114.801 1.00 82.39 N
ATOM 18 C4 U B 59 -6.486 12.550 114.974 1.00 85.43 C
ATOM 19 O4 U B 59 -6.660 11.725 114.075 1.00 84.46 O
ATOM 20 C5 U B 59 -5.856 12.298 116.235 1.00 87.82 C
ATOM 21 C6 U B 59 -5.722 13.293 117.118 1.00 86.33 C
ATOM 22 P U B 60 -8.199 17.544 121.795 1.00 93.66 P
ATOM 23 OP1 U B 60 -7.693 18.515 122.793 1.00 88.04 O
ATOM 24 OP2 U B 60 -8.547 16.163 122.221 1.00 89.01 O
ATOM 25 O5' U B 60 -9.481 18.197 121.120 1.00100.08 O
TER
ATOM 2 P G A 20 -8.224 4.473 115.238 1.00 84.42 P
ATOM 3 OP1 G A 20 -7.799 3.659 114.071 1.00 76.45 O
ATOM 4 OP2 G A 20 -7.244 4.797 116.301 1.00 77.96 O
ATOM 5 O5' G A 20 -8.844 5.835 114.687 1.00 84.41 O
ATOM 6 C5' G A 20 -9.871 5.818 113.695 1.00 79.73 C
ATOM 7 C4' G A 20 -10.232 7.226 113.284 1.00 76.67 C
ATOM 8 O4' G A 20 -10.830 7.927 114.406 1.00 76.23 O
ATOM 9 C3' G A 20 -9.062 8.102 112.878 1.00 83.22 C
ATOM 10 O3' G A 20 -8.690 7.878 111.523 1.00 85.65 O
ATOM 11 C2' G A 20 -9.614 9.501 113.115 1.00 82.22 C
ATOM 12 O2' G A 20 -10.472 9.946 112.084 1.00 80.15 O
ATOM 13 C1' G A 20 -10.422 9.285 114.394 1.00 76.26 C
ATOM 14 N9 G A 20 -9.646 9.532 115.604 1.00 75.56 N
ATOM 15 C8 G A 20 -8.898 8.619 116.309 1.00 73.88 C
ATOM 16 N7 G A 20 -8.322 9.132 117.364 1.00 77.16 N
ATOM 17 C5 G A 20 -8.710 10.466 117.353 1.00 75.75 C
ATOM 18 C6 G A 20 -8.397 11.527 118.251 1.00 74.70 C
ATOM 19 O6 G A 20 -7.695 11.497 119.269 1.00 78.23 O
ATOM 20 N1 G A 20 -9.000 12.719 117.862 1.00 73.07 N
ATOM 21 C2 G A 20 -9.800 12.875 116.757 1.00 68.93 C
ATOM 22 N2 G A 20 -10.286 14.106 116.556 1.00 67.28 N
ATOM 23 N3 G A 20 -10.101 11.898 115.914 1.00 68.03 N
ATOM 24 C4 G A 20 -9.525 10.729 116.270 1.00 73.87 C
ATOM 25 P A A 21 -7.155 8.047 111.090 1.00 79.26 P
ATOM 26 OP1 A A 21 -7.024 7.777 109.635 1.00 95.24 O
ATOM 27 OP2 A A 21 -6.334 7.273 112.056 1.00 84.21 O
ATOM 28 O5' A A 21 -6.889 9.595 111.339 1.00 82.52 O
TER
ATOM 1 O3' A B 58 -2.287 12.386 120.490 1.00 76.82 O
ATOM 2 P U B 59 -3.656 12.751 121.242 1.00 80.73 P
ATOM 3 OP1 U B 59 -3.442 12.598 122.704 1.00 87.29 O
ATOM 4 OP2 U B 59 -4.725 11.969 120.573 1.00 62.01 O
ATOM 5 O5' U B 59 -3.839 14.305 120.947 1.00 74.43 O
ATOM 6 C5' U B 59 -5.074 14.960 121.207 1.00 89.83 C
ATOM 7 C4' U B 59 -5.415 15.869 120.056 1.00 93.50 C
ATOM 8 O4' U B 59 -5.058 15.202 118.833 1.00 94.02 O
ATOM 9 C3' U B 59 -6.886 16.235 119.911 1.00 98.96 C
ATOM 10 O3' U B 59 -7.117 17.466 120.605 1.00 99.34 O
ATOM 11 C2' U B 59 -7.056 16.456 118.403 1.00 98.72 C
ATOM 12 O2' U B 59 -6.890 17.806 118.041 1.00116.91 O
ATOM 13 C1' U B 59 -5.887 15.669 117.802 1.00 90.68 C
ATOM 14 N1 U B 59 -6.152 14.573 116.863 1.00 85.38 N
ATOM 15 C2 U B 59 -6.798 14.884 115.690 1.00 81.74 C
ATOM 16 O2 U B 59 -7.227 15.994 115.456 1.00 85.32 O
ATOM 17 N3 U B 59 -6.922 13.846 114.801 1.00 82.39 N
ATOM 18 C4 U B 59 -6.486 12.550 114.974 1.00 85.43 C
ATOM 19 O4 U B 59 -6.660 11.725 114.075 1.00 84.46 O
ATOM 20 C5 U B 59 -5.856 12.298 116.235 1.00 87.82 C
ATOM 21 C6 U B 59 -5.722 13.293 117.118 1.00 86.33 C
ATOM 22 P U B 60 -8.199 17.544 121.795 1.00 93.66 P
ATOM 23 OP1 U B 60 -7.693 18.515 122.793 1.00 88.04 O
ATOM 24 OP2 U B 60 -8.547 16.163 122.221 1.00 89.01 O
ATOM 25 O5' U B 60 -9.481 18.197 121.120 1.00100.08 O
TER
Atoms:
OP1: (-7.799,3.659,114.071)
OP2: (-7.244,4.797,116.301)
C3': (-9.062,8.102,112.878)
C1': (-10.422,9.285,114.394)
C5': (-9.871,5.818,113.695)
O6: (-7.695,11.497,119.269)
O4': (-10.830,7.927,114.406)
C8: (-8.898,8.619,116.309)
C2: (-9.800,12.875,116.757)
C6: (-8.397,11.527,118.251)
C5: (-8.710,10.466,117.353)
C4: (-9.525,10.729,116.270)
P: (-8.224,4.473,115.238)
C4': (-10.232,7.226,113.284)
C2': (-9.614,9.501,113.115)
O2': (-10.472,9.946,112.084)
N1: (-9.000,12.719,117.862)
N2: (-10.286,14.106,116.556)
N3: (-10.101,11.898,115.914)
N7: (-8.322,9.132,117.364)
N9: (-9.646,9.532,115.604)
O5': (-8.844,5.835,114.687)
O3': (-8.690,7.878,111.523)
OP2: (-7.244,4.797,116.301)
C3': (-9.062,8.102,112.878)
C1': (-10.422,9.285,114.394)
C5': (-9.871,5.818,113.695)
O6: (-7.695,11.497,119.269)
O4': (-10.830,7.927,114.406)
C8: (-8.898,8.619,116.309)
C2: (-9.800,12.875,116.757)
C6: (-8.397,11.527,118.251)
C5: (-8.710,10.466,117.353)
C4: (-9.525,10.729,116.270)
P: (-8.224,4.473,115.238)
C4': (-10.232,7.226,113.284)
C2': (-9.614,9.501,113.115)
O2': (-10.472,9.946,112.084)
N1: (-9.000,12.719,117.862)
N2: (-10.286,14.106,116.556)
N3: (-10.101,11.898,115.914)
N7: (-8.322,9.132,117.364)
N9: (-9.646,9.532,115.604)
O5': (-8.844,5.835,114.687)
O3': (-8.690,7.878,111.523)
C4: (-6.486,12.550,114.974)
N3: (-6.922,13.846,114.801)
OP1: (-3.442,12.598,122.704)
OP2: (-4.725,11.969,120.573)
C2: (-6.798,14.884,115.690)
C1': (-5.887,15.669,117.802)
C3': (-6.886,16.235,119.911)
O5': (-3.839,14.305,120.947)
O4': (-5.058,15.202,118.833)
C5': (-5.074,14.960,121.207)
P: (-3.656,12.751,121.242)
C4': (-5.415,15.869,120.056)
C2': (-7.056,16.456,118.403)
O2': (-6.890,17.806,118.041)
N1: (-6.152,14.573,116.863)
O4: (-6.660,11.725,114.075)
O2: (-7.227,15.994,115.456)
C6: (-5.722,13.293,117.118)
C5: (-5.856,12.298,116.235)
O3': (-7.117,17.466,120.605)
N3: (-6.922,13.846,114.801)
OP1: (-3.442,12.598,122.704)
OP2: (-4.725,11.969,120.573)
C2: (-6.798,14.884,115.690)
C1': (-5.887,15.669,117.802)
C3': (-6.886,16.235,119.911)
O5': (-3.839,14.305,120.947)
O4': (-5.058,15.202,118.833)
C5': (-5.074,14.960,121.207)
P: (-3.656,12.751,121.242)
C4': (-5.415,15.869,120.056)
C2': (-7.056,16.456,118.403)
O2': (-6.890,17.806,118.041)
N1: (-6.152,14.573,116.863)
O4: (-6.660,11.725,114.075)
O2: (-7.227,15.994,115.456)
C6: (-5.722,13.293,117.118)
C5: (-5.856,12.298,116.235)
O3': (-7.117,17.466,120.605)
Image (generated by PyMOL):