Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0355:0271
Extra
PDB:
ATOM 1 O3' U A 354 73.624 112.730 -9.709 1.00 87.01 O
ATOM 2 P G A 355 73.816 111.511 -10.739 1.00 87.61 P
ATOM 3 OP1 G A 355 75.269 111.429 -11.026 1.00 88.21 O
ATOM 4 OP2 G A 355 72.856 111.678 -11.859 1.00 87.33 O
ATOM 5 O5' G A 355 73.402 110.214 -9.912 1.00 87.58 O
ATOM 6 C5' G A 355 73.955 109.958 -8.610 1.00 88.64 C
ATOM 7 C4' G A 355 73.067 109.004 -7.847 1.00 90.06 C
ATOM 8 O4' G A 355 71.717 109.547 -7.835 1.00 90.07 O
ATOM 9 C3' G A 355 72.944 107.592 -8.419 1.00 91.44 C
ATOM 10 O3' G A 355 72.701 106.686 -7.342 1.00 92.44 O
ATOM 11 C2' G A 355 71.697 107.702 -9.291 1.00 91.75 C
ATOM 12 O2' G A 355 71.050 106.463 -9.523 1.00 93.27 O
ATOM 13 C1' G A 355 70.828 108.630 -8.444 1.00 90.38 C
ATOM 14 N9 G A 355 69.836 109.386 -9.202 1.00 88.76 N
ATOM 15 C8 G A 355 70.041 110.113 -10.352 1.00 88.85 C
ATOM 16 N7 G A 355 68.954 110.676 -10.802 1.00 88.63 N
ATOM 17 C5 G A 355 67.972 110.300 -9.897 1.00 87.87 C
ATOM 18 C6 G A 355 66.589 110.605 -9.867 1.00 87.83 C
ATOM 19 O6 G A 355 65.933 111.288 -10.662 1.00 88.68 O
ATOM 20 N1 G A 355 65.963 110.022 -8.772 1.00 87.05 N
ATOM 21 C2 G A 355 66.585 109.246 -7.829 1.00 86.42 C
ATOM 22 N2 G A 355 65.809 108.777 -6.849 1.00 87.04 N
ATOM 23 N3 G A 355 67.872 108.951 -7.847 1.00 86.31 N
ATOM 24 C4 G A 355 68.500 109.507 -8.902 1.00 87.59 C
ATOM 25 P C A 356 73.434 105.255 -7.301 1.00 92.35 P
ATOM 26 OP1 C A 356 74.719 105.423 -6.573 1.00 92.41 O
ATOM 27 OP2 C A 356 73.432 104.669 -8.666 1.00 92.58 O
ATOM 28 O5' C A 356 72.469 104.382 -6.384 1.00 92.63 O
TER
ATOM 1 O3' C B 270 64.946 101.483 -13.389 1.00128.67 O
ATOM 2 P U B 271 64.126 102.864 -13.549 1.00130.76 P
ATOM 3 OP1 U B 271 62.703 102.532 -13.822 1.00129.90 O
ATOM 4 OP2 U B 271 64.867 103.732 -14.501 1.00130.67 O
ATOM 5 O5' U B 271 64.224 103.538 -12.103 1.00132.68 O
ATOM 6 C5' U B 271 64.674 102.772 -10.956 1.00134.55 C
ATOM 7 C4' U B 271 65.816 103.480 -10.248 1.00135.27 C
ATOM 8 O4' U B 271 66.647 104.148 -11.235 1.00136.08 O
ATOM 9 C3' U B 271 65.429 104.580 -9.275 1.00135.19 C
ATOM 10 O3' U B 271 65.157 104.023 -7.993 1.00134.73 O
ATOM 11 C2' U B 271 66.688 105.438 -9.239 1.00135.18 C
ATOM 12 O2' U B 271 67.697 104.880 -8.417 1.00134.39 O
ATOM 13 C1' U B 271 67.146 105.360 -10.699 1.00135.19 C
ATOM 14 N1 U B 271 66.694 106.466 -11.560 1.00134.47 N
ATOM 15 C2 U B 271 67.656 107.337 -12.040 1.00134.23 C
ATOM 16 O2 U B 271 68.843 107.226 -11.781 1.00133.99 O
ATOM 17 N3 U B 271 67.176 108.347 -12.834 1.00134.34 N
ATOM 18 C4 U B 271 65.865 108.573 -13.190 1.00134.27 C
ATOM 19 O4 U B 271 65.585 109.566 -13.864 1.00134.66 O
ATOM 20 C5 U B 271 64.933 107.627 -12.664 1.00133.75 C
ATOM 21 C6 U B 271 65.365 106.633 -11.886 1.00133.60 C
ATOM 22 P C B 272 63.734 103.329 -7.704 1.00134.69 P
ATOM 23 OP1 C B 272 63.957 101.858 -7.744 1.00135.06 O
ATOM 24 OP2 C B 272 62.702 103.940 -8.582 1.00134.73 O
ATOM 25 O5' C B 272 63.405 103.737 -6.202 1.00132.59 O
TER
ATOM 2 P G A 355 73.816 111.511 -10.739 1.00 87.61 P
ATOM 3 OP1 G A 355 75.269 111.429 -11.026 1.00 88.21 O
ATOM 4 OP2 G A 355 72.856 111.678 -11.859 1.00 87.33 O
ATOM 5 O5' G A 355 73.402 110.214 -9.912 1.00 87.58 O
ATOM 6 C5' G A 355 73.955 109.958 -8.610 1.00 88.64 C
ATOM 7 C4' G A 355 73.067 109.004 -7.847 1.00 90.06 C
ATOM 8 O4' G A 355 71.717 109.547 -7.835 1.00 90.07 O
ATOM 9 C3' G A 355 72.944 107.592 -8.419 1.00 91.44 C
ATOM 10 O3' G A 355 72.701 106.686 -7.342 1.00 92.44 O
ATOM 11 C2' G A 355 71.697 107.702 -9.291 1.00 91.75 C
ATOM 12 O2' G A 355 71.050 106.463 -9.523 1.00 93.27 O
ATOM 13 C1' G A 355 70.828 108.630 -8.444 1.00 90.38 C
ATOM 14 N9 G A 355 69.836 109.386 -9.202 1.00 88.76 N
ATOM 15 C8 G A 355 70.041 110.113 -10.352 1.00 88.85 C
ATOM 16 N7 G A 355 68.954 110.676 -10.802 1.00 88.63 N
ATOM 17 C5 G A 355 67.972 110.300 -9.897 1.00 87.87 C
ATOM 18 C6 G A 355 66.589 110.605 -9.867 1.00 87.83 C
ATOM 19 O6 G A 355 65.933 111.288 -10.662 1.00 88.68 O
ATOM 20 N1 G A 355 65.963 110.022 -8.772 1.00 87.05 N
ATOM 21 C2 G A 355 66.585 109.246 -7.829 1.00 86.42 C
ATOM 22 N2 G A 355 65.809 108.777 -6.849 1.00 87.04 N
ATOM 23 N3 G A 355 67.872 108.951 -7.847 1.00 86.31 N
ATOM 24 C4 G A 355 68.500 109.507 -8.902 1.00 87.59 C
ATOM 25 P C A 356 73.434 105.255 -7.301 1.00 92.35 P
ATOM 26 OP1 C A 356 74.719 105.423 -6.573 1.00 92.41 O
ATOM 27 OP2 C A 356 73.432 104.669 -8.666 1.00 92.58 O
ATOM 28 O5' C A 356 72.469 104.382 -6.384 1.00 92.63 O
TER
ATOM 1 O3' C B 270 64.946 101.483 -13.389 1.00128.67 O
ATOM 2 P U B 271 64.126 102.864 -13.549 1.00130.76 P
ATOM 3 OP1 U B 271 62.703 102.532 -13.822 1.00129.90 O
ATOM 4 OP2 U B 271 64.867 103.732 -14.501 1.00130.67 O
ATOM 5 O5' U B 271 64.224 103.538 -12.103 1.00132.68 O
ATOM 6 C5' U B 271 64.674 102.772 -10.956 1.00134.55 C
ATOM 7 C4' U B 271 65.816 103.480 -10.248 1.00135.27 C
ATOM 8 O4' U B 271 66.647 104.148 -11.235 1.00136.08 O
ATOM 9 C3' U B 271 65.429 104.580 -9.275 1.00135.19 C
ATOM 10 O3' U B 271 65.157 104.023 -7.993 1.00134.73 O
ATOM 11 C2' U B 271 66.688 105.438 -9.239 1.00135.18 C
ATOM 12 O2' U B 271 67.697 104.880 -8.417 1.00134.39 O
ATOM 13 C1' U B 271 67.146 105.360 -10.699 1.00135.19 C
ATOM 14 N1 U B 271 66.694 106.466 -11.560 1.00134.47 N
ATOM 15 C2 U B 271 67.656 107.337 -12.040 1.00134.23 C
ATOM 16 O2 U B 271 68.843 107.226 -11.781 1.00133.99 O
ATOM 17 N3 U B 271 67.176 108.347 -12.834 1.00134.34 N
ATOM 18 C4 U B 271 65.865 108.573 -13.190 1.00134.27 C
ATOM 19 O4 U B 271 65.585 109.566 -13.864 1.00134.66 O
ATOM 20 C5 U B 271 64.933 107.627 -12.664 1.00133.75 C
ATOM 21 C6 U B 271 65.365 106.633 -11.886 1.00133.60 C
ATOM 22 P C B 272 63.734 103.329 -7.704 1.00134.69 P
ATOM 23 OP1 C B 272 63.957 101.858 -7.744 1.00135.06 O
ATOM 24 OP2 C B 272 62.702 103.940 -8.582 1.00134.73 O
ATOM 25 O5' C B 272 63.405 103.737 -6.202 1.00132.59 O
TER
Atoms:
OP1: (75.269,111.429,-11.026)
OP2: (72.856,111.678,-11.859)
C3': (72.944,107.592,-8.419)
C1': (70.828,108.630,-8.444)
C5': (73.955,109.958,-8.610)
O6: (65.933,111.288,-10.662)
O4': (71.717,109.547,-7.835)
C8: (70.041,110.113,-10.352)
C2: (66.585,109.246,-7.829)
C6: (66.589,110.605,-9.867)
C5: (67.972,110.300,-9.897)
C4: (68.500,109.507,-8.902)
P: (73.816,111.511,-10.739)
C4': (73.067,109.004,-7.847)
C2': (71.697,107.702,-9.291)
O2': (71.050,106.463,-9.523)
N1: (65.963,110.022,-8.772)
N2: (65.809,108.777,-6.849)
N3: (67.872,108.951,-7.847)
N7: (68.954,110.676,-10.802)
N9: (69.836,109.386,-9.202)
O5': (73.402,110.214,-9.912)
O3': (72.701,106.686,-7.342)
OP2: (72.856,111.678,-11.859)
C3': (72.944,107.592,-8.419)
C1': (70.828,108.630,-8.444)
C5': (73.955,109.958,-8.610)
O6: (65.933,111.288,-10.662)
O4': (71.717,109.547,-7.835)
C8: (70.041,110.113,-10.352)
C2: (66.585,109.246,-7.829)
C6: (66.589,110.605,-9.867)
C5: (67.972,110.300,-9.897)
C4: (68.500,109.507,-8.902)
P: (73.816,111.511,-10.739)
C4': (73.067,109.004,-7.847)
C2': (71.697,107.702,-9.291)
O2': (71.050,106.463,-9.523)
N1: (65.963,110.022,-8.772)
N2: (65.809,108.777,-6.849)
N3: (67.872,108.951,-7.847)
N7: (68.954,110.676,-10.802)
N9: (69.836,109.386,-9.202)
O5': (73.402,110.214,-9.912)
O3': (72.701,106.686,-7.342)
C4: (65.865,108.573,-13.190)
N3: (67.176,108.347,-12.834)
OP1: (62.703,102.532,-13.822)
OP2: (64.867,103.732,-14.501)
C2: (67.656,107.337,-12.040)
C1': (67.146,105.360,-10.699)
C3': (65.429,104.580,-9.275)
O5': (64.224,103.538,-12.103)
O4': (66.647,104.148,-11.235)
C5': (64.674,102.772,-10.956)
P: (64.126,102.864,-13.549)
C4': (65.816,103.480,-10.248)
C2': (66.688,105.438,-9.239)
O2': (67.697,104.880,-8.417)
N1: (66.694,106.466,-11.560)
O4: (65.585,109.566,-13.864)
O2: (68.843,107.226,-11.781)
C6: (65.365,106.633,-11.886)
C5: (64.933,107.627,-12.664)
O3': (65.157,104.023,-7.993)
N3: (67.176,108.347,-12.834)
OP1: (62.703,102.532,-13.822)
OP2: (64.867,103.732,-14.501)
C2: (67.656,107.337,-12.040)
C1': (67.146,105.360,-10.699)
C3': (65.429,104.580,-9.275)
O5': (64.224,103.538,-12.103)
O4': (66.647,104.148,-11.235)
C5': (64.674,102.772,-10.956)
P: (64.126,102.864,-13.549)
C4': (65.816,103.480,-10.248)
C2': (66.688,105.438,-9.239)
O2': (67.697,104.880,-8.417)
N1: (66.694,106.466,-11.560)
O4: (65.585,109.566,-13.864)
O2: (68.843,107.226,-11.781)
C6: (65.365,106.633,-11.886)
C5: (64.933,107.627,-12.664)
O3': (65.157,104.023,-7.993)
Image (generated by PyMOL):