Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A592:A536
Extra
PDB:
ATOM 1 O3' A A 591 -5.577 134.468 88.814 1.00 86.67 O
ATOM 2 P G A 592 -4.830 135.295 89.980 1.00 88.89 P
ATOM 3 OP1 G A 592 -5.690 135.245 91.195 1.00 89.16 O
ATOM 4 OP2 G A 592 -4.395 136.614 89.446 1.00 88.75 O
ATOM 5 O5' G A 592 -3.504 134.456 90.262 1.00 86.64 O
ATOM 6 C5' G A 592 -2.490 134.975 91.143 1.00 82.08 C
ATOM 7 C4' G A 592 -1.707 133.845 91.783 1.00 78.19 C
ATOM 8 O4' G A 592 -0.944 133.118 90.776 1.00 76.04 O
ATOM 9 C3' G A 592 -0.680 134.330 92.807 1.00 76.65 C
ATOM 10 O3' G A 592 -0.423 133.346 93.796 1.00 74.90 O
ATOM 11 C2' G A 592 0.584 134.424 91.972 1.00 76.52 C
ATOM 12 O2' G A 592 1.766 134.361 92.738 1.00 77.34 O
ATOM 13 C1' G A 592 0.433 133.182 91.101 1.00 75.28 C
ATOM 14 N9 G A 592 1.222 133.214 89.875 1.00 73.02 N
ATOM 15 C8 G A 592 1.526 134.318 89.108 1.00 72.24 C
ATOM 16 N7 G A 592 2.259 134.033 88.067 1.00 71.20 N
ATOM 17 C5 G A 592 2.452 132.658 88.147 1.00 70.69 C
ATOM 18 C6 G A 592 3.161 131.780 87.288 1.00 69.49 C
ATOM 19 O6 G A 592 3.802 132.053 86.261 1.00 68.54 O
ATOM 20 N1 G A 592 3.080 130.463 87.727 1.00 68.73 N
ATOM 21 C2 G A 592 2.415 130.044 88.850 1.00 69.56 C
ATOM 22 N2 G A 592 2.430 128.724 89.086 1.00 69.76 N
ATOM 23 N3 G A 592 1.772 130.854 89.675 1.00 70.29 N
ATOM 24 C4 G A 592 1.822 132.137 89.260 1.00 71.44 C
ATOM 25 P C A 593 -1.629 132.723 94.631 1.00 73.53 P
ATOM 26 OP1 C A 593 -2.703 133.762 94.652 1.00 73.52 O
ATOM 27 OP2 C A 593 -1.067 132.228 95.917 1.00 72.64 O
ATOM 28 O5' C A 593 -2.075 131.496 93.707 1.00 70.83 O
TER
ATOM 1 O3' A B 535 5.878 139.413 92.473 1.00 56.34 O
ATOM 2 P U B 536 4.542 139.242 91.599 1.00 56.63 P
ATOM 3 OP1 U B 536 4.164 140.629 91.245 1.00 55.78 O
ATOM 4 OP2 U B 536 3.593 138.394 92.380 1.00 56.34 O
ATOM 5 O5' U B 536 5.020 138.472 90.281 1.00 55.41 O
ATOM 6 C5' U B 536 6.030 139.051 89.423 1.00 55.82 C
ATOM 7 C4' U B 536 6.217 138.236 88.158 1.00 56.65 C
ATOM 8 O4' U B 536 6.661 136.895 88.509 1.00 55.32 O
ATOM 9 C3' U B 536 4.993 138.061 87.260 1.00 57.72 C
ATOM 10 O3' U B 536 5.411 137.956 85.886 1.00 60.64 O
ATOM 11 C2' U B 536 4.465 136.707 87.717 1.00 57.10 C
ATOM 12 O2' U B 536 3.646 136.106 86.733 1.00 57.22 O
ATOM 13 C1' U B 536 5.782 135.949 87.941 1.00 55.44 C
ATOM 14 N1 U B 536 5.710 134.779 88.830 1.00 53.71 N
ATOM 15 C2 U B 536 6.051 133.545 88.300 1.00 52.72 C
ATOM 16 O2 U B 536 6.535 133.405 87.198 1.00 53.47 O
ATOM 17 N3 U B 536 5.817 132.474 89.122 1.00 52.59 N
ATOM 18 C4 U B 536 5.312 132.500 90.406 1.00 54.71 C
ATOM 19 O4 U B 536 4.901 131.451 90.913 1.00 55.39 O
ATOM 20 C5 U B 536 5.077 133.820 90.921 1.00 55.51 C
ATOM 21 C6 U B 536 5.276 134.887 90.137 1.00 55.13 C
ATOM 22 P A B 537 4.920 139.036 84.786 1.00 63.67 P
ATOM 23 OP1 A B 537 5.983 139.108 83.747 1.00 63.49 O
ATOM 24 OP2 A B 537 4.472 140.292 85.457 1.00 63.42 O
ATOM 25 O5' A B 537 3.650 138.367 84.088 1.00 63.39 O
TER
ATOM 2 P G A 592 -4.830 135.295 89.980 1.00 88.89 P
ATOM 3 OP1 G A 592 -5.690 135.245 91.195 1.00 89.16 O
ATOM 4 OP2 G A 592 -4.395 136.614 89.446 1.00 88.75 O
ATOM 5 O5' G A 592 -3.504 134.456 90.262 1.00 86.64 O
ATOM 6 C5' G A 592 -2.490 134.975 91.143 1.00 82.08 C
ATOM 7 C4' G A 592 -1.707 133.845 91.783 1.00 78.19 C
ATOM 8 O4' G A 592 -0.944 133.118 90.776 1.00 76.04 O
ATOM 9 C3' G A 592 -0.680 134.330 92.807 1.00 76.65 C
ATOM 10 O3' G A 592 -0.423 133.346 93.796 1.00 74.90 O
ATOM 11 C2' G A 592 0.584 134.424 91.972 1.00 76.52 C
ATOM 12 O2' G A 592 1.766 134.361 92.738 1.00 77.34 O
ATOM 13 C1' G A 592 0.433 133.182 91.101 1.00 75.28 C
ATOM 14 N9 G A 592 1.222 133.214 89.875 1.00 73.02 N
ATOM 15 C8 G A 592 1.526 134.318 89.108 1.00 72.24 C
ATOM 16 N7 G A 592 2.259 134.033 88.067 1.00 71.20 N
ATOM 17 C5 G A 592 2.452 132.658 88.147 1.00 70.69 C
ATOM 18 C6 G A 592 3.161 131.780 87.288 1.00 69.49 C
ATOM 19 O6 G A 592 3.802 132.053 86.261 1.00 68.54 O
ATOM 20 N1 G A 592 3.080 130.463 87.727 1.00 68.73 N
ATOM 21 C2 G A 592 2.415 130.044 88.850 1.00 69.56 C
ATOM 22 N2 G A 592 2.430 128.724 89.086 1.00 69.76 N
ATOM 23 N3 G A 592 1.772 130.854 89.675 1.00 70.29 N
ATOM 24 C4 G A 592 1.822 132.137 89.260 1.00 71.44 C
ATOM 25 P C A 593 -1.629 132.723 94.631 1.00 73.53 P
ATOM 26 OP1 C A 593 -2.703 133.762 94.652 1.00 73.52 O
ATOM 27 OP2 C A 593 -1.067 132.228 95.917 1.00 72.64 O
ATOM 28 O5' C A 593 -2.075 131.496 93.707 1.00 70.83 O
TER
ATOM 1 O3' A B 535 5.878 139.413 92.473 1.00 56.34 O
ATOM 2 P U B 536 4.542 139.242 91.599 1.00 56.63 P
ATOM 3 OP1 U B 536 4.164 140.629 91.245 1.00 55.78 O
ATOM 4 OP2 U B 536 3.593 138.394 92.380 1.00 56.34 O
ATOM 5 O5' U B 536 5.020 138.472 90.281 1.00 55.41 O
ATOM 6 C5' U B 536 6.030 139.051 89.423 1.00 55.82 C
ATOM 7 C4' U B 536 6.217 138.236 88.158 1.00 56.65 C
ATOM 8 O4' U B 536 6.661 136.895 88.509 1.00 55.32 O
ATOM 9 C3' U B 536 4.993 138.061 87.260 1.00 57.72 C
ATOM 10 O3' U B 536 5.411 137.956 85.886 1.00 60.64 O
ATOM 11 C2' U B 536 4.465 136.707 87.717 1.00 57.10 C
ATOM 12 O2' U B 536 3.646 136.106 86.733 1.00 57.22 O
ATOM 13 C1' U B 536 5.782 135.949 87.941 1.00 55.44 C
ATOM 14 N1 U B 536 5.710 134.779 88.830 1.00 53.71 N
ATOM 15 C2 U B 536 6.051 133.545 88.300 1.00 52.72 C
ATOM 16 O2 U B 536 6.535 133.405 87.198 1.00 53.47 O
ATOM 17 N3 U B 536 5.817 132.474 89.122 1.00 52.59 N
ATOM 18 C4 U B 536 5.312 132.500 90.406 1.00 54.71 C
ATOM 19 O4 U B 536 4.901 131.451 90.913 1.00 55.39 O
ATOM 20 C5 U B 536 5.077 133.820 90.921 1.00 55.51 C
ATOM 21 C6 U B 536 5.276 134.887 90.137 1.00 55.13 C
ATOM 22 P A B 537 4.920 139.036 84.786 1.00 63.67 P
ATOM 23 OP1 A B 537 5.983 139.108 83.747 1.00 63.49 O
ATOM 24 OP2 A B 537 4.472 140.292 85.457 1.00 63.42 O
ATOM 25 O5' A B 537 3.650 138.367 84.088 1.00 63.39 O
TER
Atoms:
OP1: (-5.690,135.245,91.195)
OP2: (-4.395,136.614,89.446)
C3': (-0.680,134.330,92.807)
C1': (0.433,133.182,91.101)
C5': (-2.490,134.975,91.143)
O6: (3.802,132.053,86.261)
O4': (-0.944,133.118,90.776)
C8: (1.526,134.318,89.108)
C2: (2.415,130.044,88.850)
C6: (3.161,131.780,87.288)
C5: (2.452,132.658,88.147)
C4: (1.822,132.137,89.260)
P: (-4.830,135.295,89.980)
C4': (-1.707,133.845,91.783)
C2': (0.584,134.424,91.972)
O2': (1.766,134.361,92.738)
N1: (3.080,130.463,87.727)
N2: (2.430,128.724,89.086)
N3: (1.772,130.854,89.675)
N7: (2.259,134.033,88.067)
N9: (1.222,133.214,89.875)
O5': (-3.504,134.456,90.262)
O3': (-0.423,133.346,93.796)
OP2: (-4.395,136.614,89.446)
C3': (-0.680,134.330,92.807)
C1': (0.433,133.182,91.101)
C5': (-2.490,134.975,91.143)
O6: (3.802,132.053,86.261)
O4': (-0.944,133.118,90.776)
C8: (1.526,134.318,89.108)
C2: (2.415,130.044,88.850)
C6: (3.161,131.780,87.288)
C5: (2.452,132.658,88.147)
C4: (1.822,132.137,89.260)
P: (-4.830,135.295,89.980)
C4': (-1.707,133.845,91.783)
C2': (0.584,134.424,91.972)
O2': (1.766,134.361,92.738)
N1: (3.080,130.463,87.727)
N2: (2.430,128.724,89.086)
N3: (1.772,130.854,89.675)
N7: (2.259,134.033,88.067)
N9: (1.222,133.214,89.875)
O5': (-3.504,134.456,90.262)
O3': (-0.423,133.346,93.796)
C4: (5.312,132.500,90.406)
N3: (5.817,132.474,89.122)
OP1: (4.164,140.629,91.245)
OP2: (3.593,138.394,92.380)
C2: (6.051,133.545,88.300)
C1': (5.782,135.949,87.941)
C3': (4.993,138.061,87.260)
O5': (5.020,138.472,90.281)
O4': (6.661,136.895,88.509)
C5': (6.030,139.051,89.423)
P: (4.542,139.242,91.599)
C4': (6.217,138.236,88.158)
C2': (4.465,136.707,87.717)
O2': (3.646,136.106,86.733)
N1: (5.710,134.779,88.830)
O4: (4.901,131.451,90.913)
O2: (6.535,133.405,87.198)
C6: (5.276,134.887,90.137)
C5: (5.077,133.820,90.921)
O3': (5.411,137.956,85.886)
N3: (5.817,132.474,89.122)
OP1: (4.164,140.629,91.245)
OP2: (3.593,138.394,92.380)
C2: (6.051,133.545,88.300)
C1': (5.782,135.949,87.941)
C3': (4.993,138.061,87.260)
O5': (5.020,138.472,90.281)
O4': (6.661,136.895,88.509)
C5': (6.030,139.051,89.423)
P: (4.542,139.242,91.599)
C4': (6.217,138.236,88.158)
C2': (4.465,136.707,87.717)
O2': (3.646,136.106,86.733)
N1: (5.710,134.779,88.830)
O4: (4.901,131.451,90.913)
O2: (6.535,133.405,87.198)
C6: (5.276,134.887,90.137)
C5: (5.077,133.820,90.921)
O3': (5.411,137.956,85.886)
Image (generated by PyMOL):