Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:B20:B59
Extra
PDB:
ATOM 1 O3' A A 19 91.208 4.239 38.975 1.00114.02 O
ATOM 2 P G A 20 89.759 4.591 39.557 1.00117.42 P
ATOM 3 OP1 G A 20 89.415 3.601 40.608 1.00121.56 O
ATOM 4 OP2 G A 20 88.856 4.768 38.389 1.00101.78 O
ATOM 5 O5' G A 20 89.986 6.004 40.249 1.00 98.55 O
ATOM 6 C5' G A 20 90.891 6.137 41.337 1.00 91.50 C
ATOM 7 C4' G A 20 91.066 7.591 41.687 1.00 98.51 C
ATOM 8 O4' G A 20 91.830 8.260 40.649 1.00 97.16 O
ATOM 9 C3' G A 20 89.774 8.380 41.762 1.00100.47 C
ATOM 10 O3' G A 20 89.134 8.193 43.021 1.00102.59 O
ATOM 11 C2' G A 20 90.260 9.806 41.533 1.00 92.70 C
ATOM 12 O2' G A 20 90.838 10.379 42.685 1.00 96.08 O
ATOM 13 C1' G A 20 91.354 9.586 40.486 1.00 89.33 C
ATOM 14 N9 G A 20 90.892 9.740 39.109 1.00 90.21 N
ATOM 15 C8 G A 20 90.366 8.765 38.290 1.00 89.16 C
ATOM 16 N7 G A 20 90.053 9.207 37.101 1.00 83.78 N
ATOM 17 C5 G A 20 90.391 10.554 37.137 1.00 85.07 C
ATOM 18 C6 G A 20 90.283 11.558 36.135 1.00 80.92 C
ATOM 19 O6 G A 20 89.862 11.451 34.980 1.00 79.58 O
ATOM 20 N1 G A 20 90.734 12.791 36.597 1.00 80.29 N
ATOM 21 C2 G A 20 91.229 13.030 37.859 1.00 85.21 C
ATOM 22 N2 G A 20 91.608 14.290 38.123 1.00 86.62 N
ATOM 23 N3 G A 20 91.343 12.102 38.796 1.00 83.85 N
ATOM 24 C4 G A 20 90.907 10.898 38.370 1.00 83.85 C
ATOM 25 P A A 21 87.532 8.093 43.085 1.00 97.80 P
ATOM 26 OP1 A A 21 87.115 7.772 44.473 1.00 93.70 O
ATOM 27 OP2 A A 21 87.113 7.206 41.970 1.00 89.90 O
ATOM 28 O5' A A 21 87.072 9.579 42.748 1.00 95.87 O
TER
ATOM 1 O3' A B 58 84.454 12.727 32.622 1.00 98.34 O
ATOM 2 P U B 59 85.969 12.867 32.115 1.00 97.53 P
ATOM 3 OP1 U B 59 85.998 12.628 30.649 1.00 90.29 O
ATOM 4 OP2 U B 59 86.824 12.045 33.011 1.00 97.21 O
ATOM 5 O5' U B 59 86.294 14.402 32.362 1.00 90.17 O
ATOM 6 C5' U B 59 87.627 14.848 32.525 1.00 98.34 C
ATOM 7 C4' U B 59 87.697 15.799 33.684 1.00 94.43 C
ATOM 8 O4' U B 59 87.087 15.179 34.830 1.00 88.42 O
ATOM 9 C3' U B 59 89.092 16.198 34.132 1.00 99.83 C
ATOM 10 O3' U B 59 89.429 17.382 33.413 1.00103.55 O
ATOM 11 C2' U B 59 88.910 16.526 35.617 1.00104.00 C
ATOM 12 O2' U B 59 88.637 17.895 35.827 1.00116.81 O
ATOM 13 C1' U B 59 87.665 15.715 35.995 1.00 90.23 C
ATOM 14 N1 U B 59 87.779 14.648 36.995 1.00 77.41 N
ATOM 15 C2 U B 59 88.289 14.969 38.240 1.00 76.94 C
ATOM 16 O2 U B 59 88.729 16.076 38.517 1.00 71.85 O
ATOM 17 N3 U B 59 88.264 13.941 39.151 1.00 73.42 N
ATOM 18 C4 U B 59 87.808 12.654 38.938 1.00 72.59 C
ATOM 19 O4 U B 59 87.837 11.841 39.860 1.00 80.81 O
ATOM 20 C5 U B 59 87.334 12.399 37.617 1.00 70.24 C
ATOM 21 C6 U B 59 87.342 13.377 36.712 1.00 75.42 C
ATOM 22 P U B 60 90.944 17.663 32.973 1.00 97.80 P
ATOM 23 OP1 U B 60 90.901 18.647 31.868 1.00 89.14 O
ATOM 24 OP2 U B 60 91.613 16.352 32.763 1.00100.84 O
ATOM 25 O5' U B 60 91.594 18.397 34.229 1.00100.43 O
TER
ATOM 2 P G A 20 89.759 4.591 39.557 1.00117.42 P
ATOM 3 OP1 G A 20 89.415 3.601 40.608 1.00121.56 O
ATOM 4 OP2 G A 20 88.856 4.768 38.389 1.00101.78 O
ATOM 5 O5' G A 20 89.986 6.004 40.249 1.00 98.55 O
ATOM 6 C5' G A 20 90.891 6.137 41.337 1.00 91.50 C
ATOM 7 C4' G A 20 91.066 7.591 41.687 1.00 98.51 C
ATOM 8 O4' G A 20 91.830 8.260 40.649 1.00 97.16 O
ATOM 9 C3' G A 20 89.774 8.380 41.762 1.00100.47 C
ATOM 10 O3' G A 20 89.134 8.193 43.021 1.00102.59 O
ATOM 11 C2' G A 20 90.260 9.806 41.533 1.00 92.70 C
ATOM 12 O2' G A 20 90.838 10.379 42.685 1.00 96.08 O
ATOM 13 C1' G A 20 91.354 9.586 40.486 1.00 89.33 C
ATOM 14 N9 G A 20 90.892 9.740 39.109 1.00 90.21 N
ATOM 15 C8 G A 20 90.366 8.765 38.290 1.00 89.16 C
ATOM 16 N7 G A 20 90.053 9.207 37.101 1.00 83.78 N
ATOM 17 C5 G A 20 90.391 10.554 37.137 1.00 85.07 C
ATOM 18 C6 G A 20 90.283 11.558 36.135 1.00 80.92 C
ATOM 19 O6 G A 20 89.862 11.451 34.980 1.00 79.58 O
ATOM 20 N1 G A 20 90.734 12.791 36.597 1.00 80.29 N
ATOM 21 C2 G A 20 91.229 13.030 37.859 1.00 85.21 C
ATOM 22 N2 G A 20 91.608 14.290 38.123 1.00 86.62 N
ATOM 23 N3 G A 20 91.343 12.102 38.796 1.00 83.85 N
ATOM 24 C4 G A 20 90.907 10.898 38.370 1.00 83.85 C
ATOM 25 P A A 21 87.532 8.093 43.085 1.00 97.80 P
ATOM 26 OP1 A A 21 87.115 7.772 44.473 1.00 93.70 O
ATOM 27 OP2 A A 21 87.113 7.206 41.970 1.00 89.90 O
ATOM 28 O5' A A 21 87.072 9.579 42.748 1.00 95.87 O
TER
ATOM 1 O3' A B 58 84.454 12.727 32.622 1.00 98.34 O
ATOM 2 P U B 59 85.969 12.867 32.115 1.00 97.53 P
ATOM 3 OP1 U B 59 85.998 12.628 30.649 1.00 90.29 O
ATOM 4 OP2 U B 59 86.824 12.045 33.011 1.00 97.21 O
ATOM 5 O5' U B 59 86.294 14.402 32.362 1.00 90.17 O
ATOM 6 C5' U B 59 87.627 14.848 32.525 1.00 98.34 C
ATOM 7 C4' U B 59 87.697 15.799 33.684 1.00 94.43 C
ATOM 8 O4' U B 59 87.087 15.179 34.830 1.00 88.42 O
ATOM 9 C3' U B 59 89.092 16.198 34.132 1.00 99.83 C
ATOM 10 O3' U B 59 89.429 17.382 33.413 1.00103.55 O
ATOM 11 C2' U B 59 88.910 16.526 35.617 1.00104.00 C
ATOM 12 O2' U B 59 88.637 17.895 35.827 1.00116.81 O
ATOM 13 C1' U B 59 87.665 15.715 35.995 1.00 90.23 C
ATOM 14 N1 U B 59 87.779 14.648 36.995 1.00 77.41 N
ATOM 15 C2 U B 59 88.289 14.969 38.240 1.00 76.94 C
ATOM 16 O2 U B 59 88.729 16.076 38.517 1.00 71.85 O
ATOM 17 N3 U B 59 88.264 13.941 39.151 1.00 73.42 N
ATOM 18 C4 U B 59 87.808 12.654 38.938 1.00 72.59 C
ATOM 19 O4 U B 59 87.837 11.841 39.860 1.00 80.81 O
ATOM 20 C5 U B 59 87.334 12.399 37.617 1.00 70.24 C
ATOM 21 C6 U B 59 87.342 13.377 36.712 1.00 75.42 C
ATOM 22 P U B 60 90.944 17.663 32.973 1.00 97.80 P
ATOM 23 OP1 U B 60 90.901 18.647 31.868 1.00 89.14 O
ATOM 24 OP2 U B 60 91.613 16.352 32.763 1.00100.84 O
ATOM 25 O5' U B 60 91.594 18.397 34.229 1.00100.43 O
TER
Atoms:
OP1: (89.415,3.601,40.608)
OP2: (88.856,4.768,38.389)
C3': (89.774,8.380,41.762)
C1': (91.354,9.586,40.486)
C5': (90.891,6.137,41.337)
O6: (89.862,11.451,34.980)
O4': (91.830,8.260,40.649)
C8: (90.366,8.765,38.290)
C2: (91.229,13.030,37.859)
C6: (90.283,11.558,36.135)
C5: (90.391,10.554,37.137)
C4: (90.907,10.898,38.370)
P: (89.759,4.591,39.557)
C4': (91.066,7.591,41.687)
C2': (90.260,9.806,41.533)
O2': (90.838,10.379,42.685)
N1: (90.734,12.791,36.597)
N2: (91.608,14.290,38.123)
N3: (91.343,12.102,38.796)
N7: (90.053,9.207,37.101)
N9: (90.892,9.740,39.109)
O5': (89.986,6.004,40.249)
O3': (89.134,8.193,43.021)
OP2: (88.856,4.768,38.389)
C3': (89.774,8.380,41.762)
C1': (91.354,9.586,40.486)
C5': (90.891,6.137,41.337)
O6: (89.862,11.451,34.980)
O4': (91.830,8.260,40.649)
C8: (90.366,8.765,38.290)
C2: (91.229,13.030,37.859)
C6: (90.283,11.558,36.135)
C5: (90.391,10.554,37.137)
C4: (90.907,10.898,38.370)
P: (89.759,4.591,39.557)
C4': (91.066,7.591,41.687)
C2': (90.260,9.806,41.533)
O2': (90.838,10.379,42.685)
N1: (90.734,12.791,36.597)
N2: (91.608,14.290,38.123)
N3: (91.343,12.102,38.796)
N7: (90.053,9.207,37.101)
N9: (90.892,9.740,39.109)
O5': (89.986,6.004,40.249)
O3': (89.134,8.193,43.021)
C4: (87.808,12.654,38.938)
N3: (88.264,13.941,39.151)
OP1: (85.998,12.628,30.649)
OP2: (86.824,12.045,33.011)
C2: (88.289,14.969,38.240)
C1': (87.665,15.715,35.995)
C3': (89.092,16.198,34.132)
O5': (86.294,14.402,32.362)
O4': (87.087,15.179,34.830)
C5': (87.627,14.848,32.525)
P: (85.969,12.867,32.115)
C4': (87.697,15.799,33.684)
C2': (88.910,16.526,35.617)
O2': (88.637,17.895,35.827)
N1: (87.779,14.648,36.995)
O4: (87.837,11.841,39.860)
O2: (88.729,16.076,38.517)
C6: (87.342,13.377,36.712)
C5: (87.334,12.399,37.617)
O3': (89.429,17.382,33.413)
N3: (88.264,13.941,39.151)
OP1: (85.998,12.628,30.649)
OP2: (86.824,12.045,33.011)
C2: (88.289,14.969,38.240)
C1': (87.665,15.715,35.995)
C3': (89.092,16.198,34.132)
O5': (86.294,14.402,32.362)
O4': (87.087,15.179,34.830)
C5': (87.627,14.848,32.525)
P: (85.969,12.867,32.115)
C4': (87.697,15.799,33.684)
C2': (88.910,16.526,35.617)
O2': (88.637,17.895,35.827)
N1: (87.779,14.648,36.995)
O4: (87.837,11.841,39.860)
O2: (88.729,16.076,38.517)
C6: (87.342,13.377,36.712)
C5: (87.334,12.399,37.617)
O3': (89.429,17.382,33.413)
Image (generated by PyMOL):