Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQO:0355:0271
Extra
PDB:
ATOM 1 O3' U A 354 72.741 112.262 -9.417 1.00107.84 O
ATOM 2 P G A 355 72.936 111.150 -10.566 1.00108.99 P
ATOM 3 OP1 G A 355 74.387 111.130 -10.888 1.00108.84 O
ATOM 4 OP2 G A 355 71.947 111.382 -11.652 1.00108.41 O
ATOM 5 O5' G A 355 72.572 109.777 -9.843 1.00109.82 O
ATOM 6 C5' G A 355 73.045 109.496 -8.509 1.00111.22 C
ATOM 7 C4' G A 355 72.099 108.545 -7.814 1.00112.19 C
ATOM 8 O4' G A 355 70.764 109.121 -7.862 1.00112.43 O
ATOM 9 C3' G A 355 71.980 107.160 -8.445 1.00113.13 C
ATOM 10 O3' G A 355 71.683 106.193 -7.440 1.00113.96 O
ATOM 11 C2' G A 355 70.792 107.326 -9.385 1.00113.11 C
ATOM 12 O2' G A 355 70.134 106.108 -9.678 1.00113.41 O
ATOM 13 C1' G A 355 69.897 108.261 -8.574 1.00112.75 C
ATOM 14 N9 G A 355 69.012 109.080 -9.396 1.00112.44 N
ATOM 15 C8 G A 355 69.363 109.890 -10.453 1.00112.23 C
ATOM 16 N7 G A 355 68.339 110.477 -11.011 1.00112.15 N
ATOM 17 C5 G A 355 67.247 110.033 -10.276 1.00112.50 C
ATOM 18 C6 G A 355 65.864 110.324 -10.417 1.00112.92 C
ATOM 19 O6 G A 355 65.307 111.050 -11.253 1.00113.35 O
ATOM 20 N1 G A 355 65.104 109.666 -9.454 1.00112.97 N
ATOM 21 C2 G A 355 65.607 108.835 -8.482 1.00112.43 C
ATOM 22 N2 G A 355 64.714 108.302 -7.639 1.00112.08 N
ATOM 23 N3 G A 355 66.890 108.551 -8.345 1.00112.13 N
ATOM 24 C4 G A 355 67.648 109.179 -9.269 1.00112.34 C
ATOM 25 P C A 356 72.407 104.756 -7.471 1.00114.47 P
ATOM 26 OP1 C A 356 73.745 104.910 -6.842 1.00113.95 O
ATOM 27 OP2 C A 356 72.301 104.208 -8.848 1.00114.40 O
ATOM 28 O5' C A 356 71.513 103.852 -6.511 1.00114.30 O
TER
ATOM 1 O3' C B 270 64.382 100.926 -13.453 1.00141.08 O
ATOM 2 P U B 271 63.648 102.363 -13.510 1.00141.52 P
ATOM 3 OP1 U B 271 62.200 102.123 -13.737 1.00141.03 O
ATOM 4 OP2 U B 271 64.398 103.241 -14.446 1.00141.40 O
ATOM 5 O5' U B 271 63.830 102.954 -12.037 1.00141.58 O
ATOM 6 C5' U B 271 64.370 102.138 -10.971 1.00141.70 C
ATOM 7 C4' U B 271 65.409 102.910 -10.189 1.00141.57 C
ATOM 8 O4' U B 271 66.285 103.598 -11.122 1.00141.73 O
ATOM 9 C3' U B 271 64.866 104.012 -9.295 1.00141.44 C
ATOM 10 O3' U B 271 64.486 103.479 -8.028 1.00140.41 O
ATOM 11 C2' U B 271 66.059 104.956 -9.185 1.00141.60 C
ATOM 12 O2' U B 271 67.029 104.504 -8.260 1.00141.47 O
ATOM 13 C1' U B 271 66.645 104.865 -10.598 1.00141.75 C
ATOM 14 N1 U B 271 66.174 105.899 -11.535 1.00141.93 N
ATOM 15 C2 U B 271 67.131 106.637 -12.219 1.00142.00 C
ATOM 16 O2 U B 271 68.333 106.473 -12.074 1.00141.78 O
ATOM 17 N3 U B 271 66.626 107.578 -13.081 1.00142.29 N
ATOM 18 C4 U B 271 65.296 107.856 -13.327 1.00142.39 C
ATOM 19 O4 U B 271 65.002 108.738 -14.136 1.00142.73 O
ATOM 20 C5 U B 271 64.372 107.056 -12.585 1.00141.97 C
ATOM 21 C6 U B 271 64.827 106.130 -11.738 1.00141.74 C
ATOM 22 P C B 272 63.024 102.832 -7.831 1.00139.85 P
ATOM 23 OP1 C B 272 63.233 101.457 -7.307 1.00140.15 O
ATOM 24 OP2 C B 272 62.224 103.031 -9.068 1.00139.93 O
ATOM 25 O5' C B 272 62.359 103.704 -6.677 1.00138.47 O
TER
ATOM 2 P G A 355 72.936 111.150 -10.566 1.00108.99 P
ATOM 3 OP1 G A 355 74.387 111.130 -10.888 1.00108.84 O
ATOM 4 OP2 G A 355 71.947 111.382 -11.652 1.00108.41 O
ATOM 5 O5' G A 355 72.572 109.777 -9.843 1.00109.82 O
ATOM 6 C5' G A 355 73.045 109.496 -8.509 1.00111.22 C
ATOM 7 C4' G A 355 72.099 108.545 -7.814 1.00112.19 C
ATOM 8 O4' G A 355 70.764 109.121 -7.862 1.00112.43 O
ATOM 9 C3' G A 355 71.980 107.160 -8.445 1.00113.13 C
ATOM 10 O3' G A 355 71.683 106.193 -7.440 1.00113.96 O
ATOM 11 C2' G A 355 70.792 107.326 -9.385 1.00113.11 C
ATOM 12 O2' G A 355 70.134 106.108 -9.678 1.00113.41 O
ATOM 13 C1' G A 355 69.897 108.261 -8.574 1.00112.75 C
ATOM 14 N9 G A 355 69.012 109.080 -9.396 1.00112.44 N
ATOM 15 C8 G A 355 69.363 109.890 -10.453 1.00112.23 C
ATOM 16 N7 G A 355 68.339 110.477 -11.011 1.00112.15 N
ATOM 17 C5 G A 355 67.247 110.033 -10.276 1.00112.50 C
ATOM 18 C6 G A 355 65.864 110.324 -10.417 1.00112.92 C
ATOM 19 O6 G A 355 65.307 111.050 -11.253 1.00113.35 O
ATOM 20 N1 G A 355 65.104 109.666 -9.454 1.00112.97 N
ATOM 21 C2 G A 355 65.607 108.835 -8.482 1.00112.43 C
ATOM 22 N2 G A 355 64.714 108.302 -7.639 1.00112.08 N
ATOM 23 N3 G A 355 66.890 108.551 -8.345 1.00112.13 N
ATOM 24 C4 G A 355 67.648 109.179 -9.269 1.00112.34 C
ATOM 25 P C A 356 72.407 104.756 -7.471 1.00114.47 P
ATOM 26 OP1 C A 356 73.745 104.910 -6.842 1.00113.95 O
ATOM 27 OP2 C A 356 72.301 104.208 -8.848 1.00114.40 O
ATOM 28 O5' C A 356 71.513 103.852 -6.511 1.00114.30 O
TER
ATOM 1 O3' C B 270 64.382 100.926 -13.453 1.00141.08 O
ATOM 2 P U B 271 63.648 102.363 -13.510 1.00141.52 P
ATOM 3 OP1 U B 271 62.200 102.123 -13.737 1.00141.03 O
ATOM 4 OP2 U B 271 64.398 103.241 -14.446 1.00141.40 O
ATOM 5 O5' U B 271 63.830 102.954 -12.037 1.00141.58 O
ATOM 6 C5' U B 271 64.370 102.138 -10.971 1.00141.70 C
ATOM 7 C4' U B 271 65.409 102.910 -10.189 1.00141.57 C
ATOM 8 O4' U B 271 66.285 103.598 -11.122 1.00141.73 O
ATOM 9 C3' U B 271 64.866 104.012 -9.295 1.00141.44 C
ATOM 10 O3' U B 271 64.486 103.479 -8.028 1.00140.41 O
ATOM 11 C2' U B 271 66.059 104.956 -9.185 1.00141.60 C
ATOM 12 O2' U B 271 67.029 104.504 -8.260 1.00141.47 O
ATOM 13 C1' U B 271 66.645 104.865 -10.598 1.00141.75 C
ATOM 14 N1 U B 271 66.174 105.899 -11.535 1.00141.93 N
ATOM 15 C2 U B 271 67.131 106.637 -12.219 1.00142.00 C
ATOM 16 O2 U B 271 68.333 106.473 -12.074 1.00141.78 O
ATOM 17 N3 U B 271 66.626 107.578 -13.081 1.00142.29 N
ATOM 18 C4 U B 271 65.296 107.856 -13.327 1.00142.39 C
ATOM 19 O4 U B 271 65.002 108.738 -14.136 1.00142.73 O
ATOM 20 C5 U B 271 64.372 107.056 -12.585 1.00141.97 C
ATOM 21 C6 U B 271 64.827 106.130 -11.738 1.00141.74 C
ATOM 22 P C B 272 63.024 102.832 -7.831 1.00139.85 P
ATOM 23 OP1 C B 272 63.233 101.457 -7.307 1.00140.15 O
ATOM 24 OP2 C B 272 62.224 103.031 -9.068 1.00139.93 O
ATOM 25 O5' C B 272 62.359 103.704 -6.677 1.00138.47 O
TER
Atoms:
OP1: (74.387,111.130,-10.888)
OP2: (71.947,111.382,-11.652)
C3': (71.980,107.160,-8.445)
C1': (69.897,108.261,-8.574)
C5': (73.045,109.496,-8.509)
O6: (65.307,111.050,-11.253)
O4': (70.764,109.121,-7.862)
C8: (69.363,109.890,-10.453)
C2: (65.607,108.835,-8.482)
C6: (65.864,110.324,-10.417)
C5: (67.247,110.033,-10.276)
C4: (67.648,109.179,-9.269)
P: (72.936,111.150,-10.566)
C4': (72.099,108.545,-7.814)
C2': (70.792,107.326,-9.385)
O2': (70.134,106.108,-9.678)
N1: (65.104,109.666,-9.454)
N2: (64.714,108.302,-7.639)
N3: (66.890,108.551,-8.345)
N7: (68.339,110.477,-11.011)
N9: (69.012,109.080,-9.396)
O5': (72.572,109.777,-9.843)
O3': (71.683,106.193,-7.440)
OP2: (71.947,111.382,-11.652)
C3': (71.980,107.160,-8.445)
C1': (69.897,108.261,-8.574)
C5': (73.045,109.496,-8.509)
O6: (65.307,111.050,-11.253)
O4': (70.764,109.121,-7.862)
C8: (69.363,109.890,-10.453)
C2: (65.607,108.835,-8.482)
C6: (65.864,110.324,-10.417)
C5: (67.247,110.033,-10.276)
C4: (67.648,109.179,-9.269)
P: (72.936,111.150,-10.566)
C4': (72.099,108.545,-7.814)
C2': (70.792,107.326,-9.385)
O2': (70.134,106.108,-9.678)
N1: (65.104,109.666,-9.454)
N2: (64.714,108.302,-7.639)
N3: (66.890,108.551,-8.345)
N7: (68.339,110.477,-11.011)
N9: (69.012,109.080,-9.396)
O5': (72.572,109.777,-9.843)
O3': (71.683,106.193,-7.440)
C4: (65.296,107.856,-13.327)
N3: (66.626,107.578,-13.081)
OP1: (62.200,102.123,-13.737)
OP2: (64.398,103.241,-14.446)
C2: (67.131,106.637,-12.219)
C1': (66.645,104.865,-10.598)
C3': (64.866,104.012,-9.295)
O5': (63.830,102.954,-12.037)
O4': (66.285,103.598,-11.122)
C5': (64.370,102.138,-10.971)
P: (63.648,102.363,-13.510)
C4': (65.409,102.910,-10.189)
C2': (66.059,104.956,-9.185)
O2': (67.029,104.504,-8.260)
N1: (66.174,105.899,-11.535)
O4: (65.002,108.738,-14.136)
O2: (68.333,106.473,-12.074)
C6: (64.827,106.130,-11.738)
C5: (64.372,107.056,-12.585)
O3': (64.486,103.479,-8.028)
N3: (66.626,107.578,-13.081)
OP1: (62.200,102.123,-13.737)
OP2: (64.398,103.241,-14.446)
C2: (67.131,106.637,-12.219)
C1': (66.645,104.865,-10.598)
C3': (64.866,104.012,-9.295)
O5': (63.830,102.954,-12.037)
O4': (66.285,103.598,-11.122)
C5': (64.370,102.138,-10.971)
P: (63.648,102.363,-13.510)
C4': (65.409,102.910,-10.189)
C2': (66.059,104.956,-9.185)
O2': (67.029,104.504,-8.260)
N1: (66.174,105.899,-11.535)
O4: (65.002,108.738,-14.136)
O2: (68.333,106.473,-12.074)
C6: (64.827,106.130,-11.738)
C5: (64.372,107.056,-12.585)
O3': (64.486,103.479,-8.028)
Image (generated by PyMOL):