Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:B39:B44
Extra
PDB:
ATOM 1 O3' A A 38 -160.324 -35.696 38.792 1.00 16.98 O
ATOM 2 P U A 39 -159.617 -34.352 38.233 1.00 12.31 P
ATOM 3 OP1 U A 39 -158.152 -34.626 38.199 1.00 12.31 O
ATOM 4 OP2 U A 39 -160.119 -33.191 39.056 1.00 12.31 O
ATOM 5 O5' U A 39 -160.183 -34.246 36.744 1.00 12.31 O
ATOM 6 C5' U A 39 -159.847 -35.226 35.767 1.00 12.31 C
ATOM 7 C4' U A 39 -160.165 -34.746 34.381 1.00 12.31 C
ATOM 8 O4' U A 39 -161.556 -34.358 34.342 1.00 12.31 O
ATOM 9 C3' U A 39 -159.368 -33.523 33.933 1.00 12.31 C
ATOM 10 O3' U A 39 -159.122 -33.594 32.538 1.00 12.31 O
ATOM 11 C2' U A 39 -160.298 -32.362 34.239 1.00 12.31 C
ATOM 12 O2' U A 39 -160.108 -31.230 33.423 1.00 12.31 O
ATOM 13 C1' U A 39 -161.670 -32.981 34.020 1.00 12.31 C
ATOM 14 N1 U A 39 -162.707 -32.398 34.874 1.00 12.39 N
ATOM 15 C2 U A 39 -163.845 -31.954 34.238 1.00 12.39 C
ATOM 16 O2 U A 39 -164.029 -32.027 33.037 1.00 12.39 O
ATOM 17 N3 U A 39 -164.765 -31.418 35.088 1.00 12.39 N
ATOM 18 C4 U A 39 -164.655 -31.281 36.456 1.00 12.39 C
ATOM 19 O4 U A 39 -165.598 -30.766 37.043 1.00 12.39 O
ATOM 20 C5 U A 39 -163.444 -31.776 37.042 1.00 12.39 C
ATOM 21 C6 U A 39 -162.521 -32.303 36.237 1.00 12.39 C
ATOM 22 P G A 40 -157.767 -34.251 32.021 1.00 40.38 P
ATOM 23 OP1 G A 40 -158.116 -35.308 31.056 1.00 40.38 O
ATOM 24 OP2 G A 40 -156.992 -34.615 33.211 1.00 40.38 O
ATOM 25 O5' G A 40 -157.081 -33.043 31.293 1.00 40.38 O
TER
ATOM 1 O3' G B 43 -170.152 -35.264 30.834 1.00 10.92 O
ATOM 2 P A B 44 -170.658 -35.270 29.319 1.00 11.76 P
ATOM 3 OP1 A B 44 -170.663 -33.841 28.841 1.00 11.79 O
ATOM 4 OP2 A B 44 -171.953 -36.038 29.302 1.00 11.76 O
ATOM 5 O5' A B 44 -169.500 -36.100 28.601 1.00 11.76 O
ATOM 6 C5' A B 44 -169.760 -36.882 27.472 1.00 11.76 C
ATOM 7 C4' A B 44 -168.491 -37.428 26.938 1.00 11.76 C
ATOM 8 O4' A B 44 -167.512 -36.377 26.916 1.00 11.76 O
ATOM 9 C3' A B 44 -167.875 -38.518 27.779 1.00 11.76 C
ATOM 10 O3' A B 44 -168.356 -39.776 27.414 1.00 11.76 O
ATOM 11 C2' A B 44 -166.378 -38.359 27.562 1.00 11.76 C
ATOM 12 O2' A B 44 -165.963 -39.064 26.409 1.00 11.79 O
ATOM 13 C1' A B 44 -166.251 -36.864 27.294 1.00 11.76 C
ATOM 14 N9 A B 44 -165.785 -36.105 28.472 1.00 11.61 N
ATOM 15 C8 A B 44 -166.367 -35.081 29.189 1.00 11.61 C
ATOM 16 N7 A B 44 -165.620 -34.620 30.168 1.00 11.61 N
ATOM 17 C5 A B 44 -164.462 -35.390 30.071 1.00 11.61 C
ATOM 18 C6 A B 44 -163.252 -35.433 30.795 1.00 11.61 C
ATOM 19 N6 A B 44 -162.947 -34.661 31.834 1.00 11.61 N
ATOM 20 N1 A B 44 -162.322 -36.330 30.415 1.00 11.61 N
ATOM 21 C2 A B 44 -162.569 -37.142 29.380 1.00 11.61 C
ATOM 22 N3 A B 44 -163.657 -37.225 28.614 1.00 11.61 N
ATOM 23 C4 A B 44 -164.558 -36.303 29.024 1.00 11.61 C
ATOM 24 P A B 45 -168.873 -40.776 28.532 1.00 0.11 P
ATOM 25 OP1 A B 45 -169.375 -41.974 27.808 1.00 0.11 O
ATOM 26 OP2 A B 45 -169.800 -40.028 29.432 1.00 0.11 O
ATOM 27 O5' A B 45 -167.538 -41.122 29.309 1.00 0.11 O
TER
ATOM 2 P U A 39 -159.617 -34.352 38.233 1.00 12.31 P
ATOM 3 OP1 U A 39 -158.152 -34.626 38.199 1.00 12.31 O
ATOM 4 OP2 U A 39 -160.119 -33.191 39.056 1.00 12.31 O
ATOM 5 O5' U A 39 -160.183 -34.246 36.744 1.00 12.31 O
ATOM 6 C5' U A 39 -159.847 -35.226 35.767 1.00 12.31 C
ATOM 7 C4' U A 39 -160.165 -34.746 34.381 1.00 12.31 C
ATOM 8 O4' U A 39 -161.556 -34.358 34.342 1.00 12.31 O
ATOM 9 C3' U A 39 -159.368 -33.523 33.933 1.00 12.31 C
ATOM 10 O3' U A 39 -159.122 -33.594 32.538 1.00 12.31 O
ATOM 11 C2' U A 39 -160.298 -32.362 34.239 1.00 12.31 C
ATOM 12 O2' U A 39 -160.108 -31.230 33.423 1.00 12.31 O
ATOM 13 C1' U A 39 -161.670 -32.981 34.020 1.00 12.31 C
ATOM 14 N1 U A 39 -162.707 -32.398 34.874 1.00 12.39 N
ATOM 15 C2 U A 39 -163.845 -31.954 34.238 1.00 12.39 C
ATOM 16 O2 U A 39 -164.029 -32.027 33.037 1.00 12.39 O
ATOM 17 N3 U A 39 -164.765 -31.418 35.088 1.00 12.39 N
ATOM 18 C4 U A 39 -164.655 -31.281 36.456 1.00 12.39 C
ATOM 19 O4 U A 39 -165.598 -30.766 37.043 1.00 12.39 O
ATOM 20 C5 U A 39 -163.444 -31.776 37.042 1.00 12.39 C
ATOM 21 C6 U A 39 -162.521 -32.303 36.237 1.00 12.39 C
ATOM 22 P G A 40 -157.767 -34.251 32.021 1.00 40.38 P
ATOM 23 OP1 G A 40 -158.116 -35.308 31.056 1.00 40.38 O
ATOM 24 OP2 G A 40 -156.992 -34.615 33.211 1.00 40.38 O
ATOM 25 O5' G A 40 -157.081 -33.043 31.293 1.00 40.38 O
TER
ATOM 1 O3' G B 43 -170.152 -35.264 30.834 1.00 10.92 O
ATOM 2 P A B 44 -170.658 -35.270 29.319 1.00 11.76 P
ATOM 3 OP1 A B 44 -170.663 -33.841 28.841 1.00 11.79 O
ATOM 4 OP2 A B 44 -171.953 -36.038 29.302 1.00 11.76 O
ATOM 5 O5' A B 44 -169.500 -36.100 28.601 1.00 11.76 O
ATOM 6 C5' A B 44 -169.760 -36.882 27.472 1.00 11.76 C
ATOM 7 C4' A B 44 -168.491 -37.428 26.938 1.00 11.76 C
ATOM 8 O4' A B 44 -167.512 -36.377 26.916 1.00 11.76 O
ATOM 9 C3' A B 44 -167.875 -38.518 27.779 1.00 11.76 C
ATOM 10 O3' A B 44 -168.356 -39.776 27.414 1.00 11.76 O
ATOM 11 C2' A B 44 -166.378 -38.359 27.562 1.00 11.76 C
ATOM 12 O2' A B 44 -165.963 -39.064 26.409 1.00 11.79 O
ATOM 13 C1' A B 44 -166.251 -36.864 27.294 1.00 11.76 C
ATOM 14 N9 A B 44 -165.785 -36.105 28.472 1.00 11.61 N
ATOM 15 C8 A B 44 -166.367 -35.081 29.189 1.00 11.61 C
ATOM 16 N7 A B 44 -165.620 -34.620 30.168 1.00 11.61 N
ATOM 17 C5 A B 44 -164.462 -35.390 30.071 1.00 11.61 C
ATOM 18 C6 A B 44 -163.252 -35.433 30.795 1.00 11.61 C
ATOM 19 N6 A B 44 -162.947 -34.661 31.834 1.00 11.61 N
ATOM 20 N1 A B 44 -162.322 -36.330 30.415 1.00 11.61 N
ATOM 21 C2 A B 44 -162.569 -37.142 29.380 1.00 11.61 C
ATOM 22 N3 A B 44 -163.657 -37.225 28.614 1.00 11.61 N
ATOM 23 C4 A B 44 -164.558 -36.303 29.024 1.00 11.61 C
ATOM 24 P A B 45 -168.873 -40.776 28.532 1.00 0.11 P
ATOM 25 OP1 A B 45 -169.375 -41.974 27.808 1.00 0.11 O
ATOM 26 OP2 A B 45 -169.800 -40.028 29.432 1.00 0.11 O
ATOM 27 O5' A B 45 -167.538 -41.122 29.309 1.00 0.11 O
TER
Atoms:
C4: (-164.655,-31.281,36.456)
N3: (-164.765,-31.418,35.088)
OP1: (-158.152,-34.626,38.199)
OP2: (-160.119,-33.191,39.056)
C2: (-163.845,-31.954,34.238)
C1': (-161.670,-32.981,34.020)
C3': (-159.368,-33.523,33.933)
O5': (-160.183,-34.246,36.744)
O4': (-161.556,-34.358,34.342)
C5': (-159.847,-35.226,35.767)
P: (-159.617,-34.352,38.233)
C4': (-160.165,-34.746,34.381)
C2': (-160.298,-32.362,34.239)
O2': (-160.108,-31.230,33.423)
N1: (-162.707,-32.398,34.874)
O4: (-165.598,-30.766,37.043)
O2: (-164.029,-32.027,33.037)
C6: (-162.521,-32.303,36.237)
C5: (-163.444,-31.776,37.042)
O3': (-159.122,-33.594,32.538)
N3: (-164.765,-31.418,35.088)
OP1: (-158.152,-34.626,38.199)
OP2: (-160.119,-33.191,39.056)
C2: (-163.845,-31.954,34.238)
C1': (-161.670,-32.981,34.020)
C3': (-159.368,-33.523,33.933)
O5': (-160.183,-34.246,36.744)
O4': (-161.556,-34.358,34.342)
C5': (-159.847,-35.226,35.767)
P: (-159.617,-34.352,38.233)
C4': (-160.165,-34.746,34.381)
C2': (-160.298,-32.362,34.239)
O2': (-160.108,-31.230,33.423)
N1: (-162.707,-32.398,34.874)
O4: (-165.598,-30.766,37.043)
O2: (-164.029,-32.027,33.037)
C6: (-162.521,-32.303,36.237)
C5: (-163.444,-31.776,37.042)
O3': (-159.122,-33.594,32.538)
OP1: (-170.663,-33.841,28.841)
OP2: (-171.953,-36.038,29.302)
C3': (-167.875,-38.518,27.779)
C1': (-166.251,-36.864,27.294)
C5': (-169.760,-36.882,27.472)
O4': (-167.512,-36.377,26.916)
C8: (-166.367,-35.081,29.189)
O2': (-165.963,-39.064,26.409)
C6: (-163.252,-35.433,30.795)
C5: (-164.462,-35.390,30.071)
C4: (-164.558,-36.303,29.024)
P: (-170.658,-35.270,29.319)
C4': (-168.491,-37.428,26.938)
C2': (-166.378,-38.359,27.562)
C2: (-162.569,-37.142,29.380)
N1: (-162.322,-36.330,30.415)
N3: (-163.657,-37.225,28.614)
N6: (-162.947,-34.661,31.834)
N7: (-165.620,-34.620,30.168)
N9: (-165.785,-36.105,28.472)
O5': (-169.500,-36.100,28.601)
O3': (-168.356,-39.776,27.414)
OP2: (-171.953,-36.038,29.302)
C3': (-167.875,-38.518,27.779)
C1': (-166.251,-36.864,27.294)
C5': (-169.760,-36.882,27.472)
O4': (-167.512,-36.377,26.916)
C8: (-166.367,-35.081,29.189)
O2': (-165.963,-39.064,26.409)
C6: (-163.252,-35.433,30.795)
C5: (-164.462,-35.390,30.071)
C4: (-164.558,-36.303,29.024)
P: (-170.658,-35.270,29.319)
C4': (-168.491,-37.428,26.938)
C2': (-166.378,-38.359,27.562)
C2: (-162.569,-37.142,29.380)
N1: (-162.322,-36.330,30.415)
N3: (-163.657,-37.225,28.614)
N6: (-162.947,-34.661,31.834)
N7: (-165.620,-34.620,30.168)
N9: (-165.785,-36.105,28.472)
O5': (-169.500,-36.100,28.601)
O3': (-168.356,-39.776,27.414)
Image (generated by PyMOL):