Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0476:0491
Extra
PDB:
ATOM 1 O3' G A 475 25.857 163.761 55.623 1.00 45.32 O
ATOM 2 P U A 476 26.468 165.172 56.102 1.00 46.44 P
ATOM 3 OP1 U A 476 26.879 165.957 54.911 1.00 44.39 O
ATOM 4 OP2 U A 476 27.462 164.909 57.174 1.00 47.75 O
ATOM 5 O5' U A 476 25.232 165.879 56.814 1.00 47.06 O
ATOM 6 C5' U A 476 24.079 166.311 56.073 1.00 48.62 C
ATOM 7 C4' U A 476 22.907 166.481 57.008 1.00 51.20 C
ATOM 8 O4' U A 476 22.551 165.187 57.541 1.00 52.65 O
ATOM 9 C3' U A 476 23.171 167.315 58.253 1.00 53.07 C
ATOM 10 O3' U A 476 22.996 168.698 57.962 1.00 57.32 O
ATOM 11 C2' U A 476 22.090 166.826 59.212 1.00 53.62 C
ATOM 12 O2' U A 476 20.841 167.448 59.011 1.00 55.19 O
ATOM 13 C1' U A 476 21.955 165.355 58.813 1.00 52.73 C
ATOM 14 N1 U A 476 22.514 164.363 59.748 1.00 52.41 N
ATOM 15 C2 U A 476 21.818 164.120 60.925 1.00 51.73 C
ATOM 16 O2 U A 476 20.794 164.711 61.228 1.00 52.09 O
ATOM 17 N3 U A 476 22.369 163.159 61.735 1.00 50.73 N
ATOM 18 C4 U A 476 23.517 162.439 61.503 1.00 49.80 C
ATOM 19 O4 U A 476 23.866 161.587 62.313 1.00 50.56 O
ATOM 20 C5 U A 476 24.188 162.757 60.282 1.00 51.28 C
ATOM 21 C6 U A 476 23.680 163.685 59.467 1.00 51.54 C
ATOM 22 P A A 477 24.096 169.772 58.434 1.00 59.51 P
ATOM 23 OP1 A A 477 25.340 169.543 57.660 1.00 60.05 O
ATOM 24 OP2 A A 477 24.144 169.779 59.917 1.00 59.98 O
ATOM 25 O5' A A 477 23.480 171.160 57.952 1.00 60.69 O
TER
ATOM 1 O3' A B 490 12.930 168.006 69.500 1.00 54.79 O
ATOM 2 P G B 491 12.502 166.830 68.481 1.00 57.56 P
ATOM 3 OP1 G B 491 11.018 166.735 68.534 1.00 57.30 O
ATOM 4 OP2 G B 491 13.326 165.622 68.765 1.00 56.86 O
ATOM 5 O5' G B 491 12.920 167.367 67.038 1.00 56.00 O
ATOM 6 C5' G B 491 12.335 168.562 66.497 1.00 55.76 C
ATOM 7 C4' G B 491 13.068 168.994 65.250 1.00 56.07 C
ATOM 8 O4' G B 491 14.468 169.233 65.563 1.00 57.73 O
ATOM 9 C3' G B 491 13.123 167.997 64.105 1.00 55.91 C
ATOM 10 O3' G B 491 11.923 167.999 63.343 1.00 55.63 O
ATOM 11 C2' G B 491 14.313 168.519 63.310 1.00 56.88 C
ATOM 12 O2' G B 491 14.017 169.680 62.559 1.00 56.42 O
ATOM 13 C1' G B 491 15.274 168.895 64.441 1.00 57.04 C
ATOM 14 N9 G B 491 16.126 167.764 64.805 1.00 57.07 N
ATOM 15 C8 G B 491 16.029 166.981 65.929 1.00 57.23 C
ATOM 16 N7 G B 491 16.896 166.006 65.952 1.00 57.38 N
ATOM 17 C5 G B 491 17.620 166.159 64.779 1.00 56.31 C
ATOM 18 C6 G B 491 18.681 165.388 64.254 1.00 56.66 C
ATOM 19 O6 G B 491 19.206 164.375 64.730 1.00 58.29 O
ATOM 20 N1 G B 491 19.130 165.896 63.040 1.00 56.69 N
ATOM 21 C2 G B 491 18.618 166.999 62.406 1.00 56.28 C
ATOM 22 N2 G B 491 19.187 167.326 61.236 1.00 56.18 N
ATOM 23 N3 G B 491 17.621 167.724 62.883 1.00 56.28 N
ATOM 24 C4 G B 491 17.172 167.249 64.065 1.00 56.86 C
ATOM 25 P G B 492 11.534 166.718 62.450 1.00 55.53 P
ATOM 26 OP1 G B 492 10.175 166.993 61.914 1.00 57.32 O
ATOM 27 OP2 G B 492 11.779 165.472 63.218 1.00 53.58 O
ATOM 28 O5' G B 492 12.556 166.758 61.233 1.00 51.73 O
TER
ATOM 2 P U A 476 26.468 165.172 56.102 1.00 46.44 P
ATOM 3 OP1 U A 476 26.879 165.957 54.911 1.00 44.39 O
ATOM 4 OP2 U A 476 27.462 164.909 57.174 1.00 47.75 O
ATOM 5 O5' U A 476 25.232 165.879 56.814 1.00 47.06 O
ATOM 6 C5' U A 476 24.079 166.311 56.073 1.00 48.62 C
ATOM 7 C4' U A 476 22.907 166.481 57.008 1.00 51.20 C
ATOM 8 O4' U A 476 22.551 165.187 57.541 1.00 52.65 O
ATOM 9 C3' U A 476 23.171 167.315 58.253 1.00 53.07 C
ATOM 10 O3' U A 476 22.996 168.698 57.962 1.00 57.32 O
ATOM 11 C2' U A 476 22.090 166.826 59.212 1.00 53.62 C
ATOM 12 O2' U A 476 20.841 167.448 59.011 1.00 55.19 O
ATOM 13 C1' U A 476 21.955 165.355 58.813 1.00 52.73 C
ATOM 14 N1 U A 476 22.514 164.363 59.748 1.00 52.41 N
ATOM 15 C2 U A 476 21.818 164.120 60.925 1.00 51.73 C
ATOM 16 O2 U A 476 20.794 164.711 61.228 1.00 52.09 O
ATOM 17 N3 U A 476 22.369 163.159 61.735 1.00 50.73 N
ATOM 18 C4 U A 476 23.517 162.439 61.503 1.00 49.80 C
ATOM 19 O4 U A 476 23.866 161.587 62.313 1.00 50.56 O
ATOM 20 C5 U A 476 24.188 162.757 60.282 1.00 51.28 C
ATOM 21 C6 U A 476 23.680 163.685 59.467 1.00 51.54 C
ATOM 22 P A A 477 24.096 169.772 58.434 1.00 59.51 P
ATOM 23 OP1 A A 477 25.340 169.543 57.660 1.00 60.05 O
ATOM 24 OP2 A A 477 24.144 169.779 59.917 1.00 59.98 O
ATOM 25 O5' A A 477 23.480 171.160 57.952 1.00 60.69 O
TER
ATOM 1 O3' A B 490 12.930 168.006 69.500 1.00 54.79 O
ATOM 2 P G B 491 12.502 166.830 68.481 1.00 57.56 P
ATOM 3 OP1 G B 491 11.018 166.735 68.534 1.00 57.30 O
ATOM 4 OP2 G B 491 13.326 165.622 68.765 1.00 56.86 O
ATOM 5 O5' G B 491 12.920 167.367 67.038 1.00 56.00 O
ATOM 6 C5' G B 491 12.335 168.562 66.497 1.00 55.76 C
ATOM 7 C4' G B 491 13.068 168.994 65.250 1.00 56.07 C
ATOM 8 O4' G B 491 14.468 169.233 65.563 1.00 57.73 O
ATOM 9 C3' G B 491 13.123 167.997 64.105 1.00 55.91 C
ATOM 10 O3' G B 491 11.923 167.999 63.343 1.00 55.63 O
ATOM 11 C2' G B 491 14.313 168.519 63.310 1.00 56.88 C
ATOM 12 O2' G B 491 14.017 169.680 62.559 1.00 56.42 O
ATOM 13 C1' G B 491 15.274 168.895 64.441 1.00 57.04 C
ATOM 14 N9 G B 491 16.126 167.764 64.805 1.00 57.07 N
ATOM 15 C8 G B 491 16.029 166.981 65.929 1.00 57.23 C
ATOM 16 N7 G B 491 16.896 166.006 65.952 1.00 57.38 N
ATOM 17 C5 G B 491 17.620 166.159 64.779 1.00 56.31 C
ATOM 18 C6 G B 491 18.681 165.388 64.254 1.00 56.66 C
ATOM 19 O6 G B 491 19.206 164.375 64.730 1.00 58.29 O
ATOM 20 N1 G B 491 19.130 165.896 63.040 1.00 56.69 N
ATOM 21 C2 G B 491 18.618 166.999 62.406 1.00 56.28 C
ATOM 22 N2 G B 491 19.187 167.326 61.236 1.00 56.18 N
ATOM 23 N3 G B 491 17.621 167.724 62.883 1.00 56.28 N
ATOM 24 C4 G B 491 17.172 167.249 64.065 1.00 56.86 C
ATOM 25 P G B 492 11.534 166.718 62.450 1.00 55.53 P
ATOM 26 OP1 G B 492 10.175 166.993 61.914 1.00 57.32 O
ATOM 27 OP2 G B 492 11.779 165.472 63.218 1.00 53.58 O
ATOM 28 O5' G B 492 12.556 166.758 61.233 1.00 51.73 O
TER
Atoms:
C4: (23.517,162.439,61.503)
N3: (22.369,163.159,61.735)
OP1: (26.879,165.957,54.911)
OP2: (27.462,164.909,57.174)
C2: (21.818,164.120,60.925)
C1': (21.955,165.355,58.813)
C3': (23.171,167.315,58.253)
O5': (25.232,165.879,56.814)
O4': (22.551,165.187,57.541)
C5': (24.079,166.311,56.073)
P: (26.468,165.172,56.102)
C4': (22.907,166.481,57.008)
C2': (22.090,166.826,59.212)
O2': (20.841,167.448,59.011)
N1: (22.514,164.363,59.748)
O4: (23.866,161.587,62.313)
O2: (20.794,164.711,61.228)
C6: (23.680,163.685,59.467)
C5: (24.188,162.757,60.282)
O3': (22.996,168.698,57.962)
N3: (22.369,163.159,61.735)
OP1: (26.879,165.957,54.911)
OP2: (27.462,164.909,57.174)
C2: (21.818,164.120,60.925)
C1': (21.955,165.355,58.813)
C3': (23.171,167.315,58.253)
O5': (25.232,165.879,56.814)
O4': (22.551,165.187,57.541)
C5': (24.079,166.311,56.073)
P: (26.468,165.172,56.102)
C4': (22.907,166.481,57.008)
C2': (22.090,166.826,59.212)
O2': (20.841,167.448,59.011)
N1: (22.514,164.363,59.748)
O4: (23.866,161.587,62.313)
O2: (20.794,164.711,61.228)
C6: (23.680,163.685,59.467)
C5: (24.188,162.757,60.282)
O3': (22.996,168.698,57.962)
OP1: (11.018,166.735,68.534)
OP2: (13.326,165.622,68.765)
C3': (13.123,167.997,64.105)
C1': (15.274,168.895,64.441)
C5': (12.335,168.562,66.497)
O6: (19.206,164.375,64.730)
O4': (14.468,169.233,65.563)
C8: (16.029,166.981,65.929)
C2: (18.618,166.999,62.406)
C6: (18.681,165.388,64.254)
C5: (17.620,166.159,64.779)
C4: (17.172,167.249,64.065)
P: (12.502,166.830,68.481)
C4': (13.068,168.994,65.250)
C2': (14.313,168.519,63.310)
O2': (14.017,169.680,62.559)
N1: (19.130,165.896,63.040)
N2: (19.187,167.326,61.236)
N3: (17.621,167.724,62.883)
N7: (16.896,166.006,65.952)
N9: (16.126,167.764,64.805)
O5': (12.920,167.367,67.038)
O3': (11.923,167.999,63.343)
OP2: (13.326,165.622,68.765)
C3': (13.123,167.997,64.105)
C1': (15.274,168.895,64.441)
C5': (12.335,168.562,66.497)
O6: (19.206,164.375,64.730)
O4': (14.468,169.233,65.563)
C8: (16.029,166.981,65.929)
C2: (18.618,166.999,62.406)
C6: (18.681,165.388,64.254)
C5: (17.620,166.159,64.779)
C4: (17.172,167.249,64.065)
P: (12.502,166.830,68.481)
C4': (13.068,168.994,65.250)
C2': (14.313,168.519,63.310)
O2': (14.017,169.680,62.559)
N1: (19.130,165.896,63.040)
N2: (19.187,167.326,61.236)
N3: (17.621,167.724,62.883)
N7: (16.896,166.006,65.952)
N9: (16.126,167.764,64.805)
O5': (12.920,167.367,67.038)
O3': (11.923,167.999,63.343)
Image (generated by PyMOL):