ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0476:0491

Extra

PDB:
ATOM 1 O3' G A 475 26.196 163.966 55.835 1.00 60.99 O
ATOM 2 P U A 476 26.841 165.341 56.354 1.00 61.27 P
ATOM 3 OP1 U A 476 27.249 166.145 55.171 1.00 59.36 O
ATOM 4 OP2 U A 476 27.850 165.012 57.399 1.00 61.58 O
ATOM 5 O5' U A 476 25.611 166.038 57.084 1.00 60.78 O
ATOM 6 C5' U A 476 24.429 166.388 56.353 1.00 62.86 C
ATOM 7 C4' U A 476 23.245 166.478 57.281 1.00 65.40 C
ATOM 8 O4' U A 476 22.991 165.170 57.835 1.00 67.03 O
ATOM 9 C3' U A 476 23.411 167.344 58.520 1.00 66.68 C
ATOM 10 O3' U A 476 23.187 168.719 58.215 1.00 69.94 O
ATOM 11 C2' U A 476 22.311 166.805 59.432 1.00 66.93 C
ATOM 12 O2' U A 476 21.040 167.335 59.134 1.00 67.11 O
ATOM 13 C1' U A 476 22.292 165.321 59.057 1.00 68.37 C
ATOM 14 N1 U A 476 22.852 164.390 60.051 1.00 71.02 N
ATOM 15 C2 U A 476 22.053 164.044 61.135 1.00 70.93 C
ATOM 16 O2 U A 476 20.948 164.521 61.325 1.00 70.67 O
ATOM 17 N3 U A 476 22.608 163.126 61.992 1.00 71.59 N
ATOM 18 C4 U A 476 23.859 162.543 61.894 1.00 72.14 C
ATOM 19 O4 U A 476 24.215 161.727 62.746 1.00 73.13 O
ATOM 20 C5 U A 476 24.634 162.972 60.770 1.00 72.12 C
ATOM 21 C6 U A 476 24.120 163.857 59.909 1.00 72.04 C
ATOM 22 P A A 477 24.289 169.833 58.607 1.00 72.94 P
ATOM 23 OP1 A A 477 25.483 169.656 57.738 1.00 73.93 O
ATOM 24 OP2 A A 477 24.456 169.857 60.084 1.00 73.09 O
ATOM 25 O5' A A 477 23.598 171.206 58.181 1.00 74.36 O
TER

ATOM 1 O3' A B 490 12.969 168.312 69.787 1.00 70.92 O
ATOM 2 P G B 491 12.504 167.105 68.819 1.00 74.03 P
ATOM 3 OP1 G B 491 11.013 167.123 68.798 1.00 73.40 O
ATOM 4 OP2 G B 491 13.216 165.862 69.218 1.00 73.09 O
ATOM 5 O5' G B 491 13.026 167.520 67.370 1.00 72.36 O
ATOM 6 C5' G B 491 12.547 168.718 66.747 1.00 72.07 C
ATOM 7 C4' G B 491 13.370 169.063 65.527 1.00 71.88 C
ATOM 8 O4' G B 491 14.776 169.180 65.881 1.00 71.98 O
ATOM 9 C3' G B 491 13.388 168.076 64.373 1.00 71.63 C
ATOM 10 O3' G B 491 12.201 168.138 63.589 1.00 71.33 O
ATOM 11 C2' G B 491 14.604 168.572 63.598 1.00 72.68 C
ATOM 12 O2' G B 491 14.362 169.767 62.875 1.00 72.54 O
ATOM 13 C1' G B 491 15.572 168.880 64.742 1.00 72.09 C
ATOM 14 N9 G B 491 16.407 167.717 65.039 1.00 71.78 N
ATOM 15 C8 G B 491 16.300 166.867 66.111 1.00 72.05 C
ATOM 16 N7 G B 491 17.166 165.891 66.078 1.00 72.05 N
ATOM 17 C5 G B 491 17.896 166.115 64.920 1.00 71.55 C
ATOM 18 C6 G B 491 18.971 165.383 64.357 1.00 71.88 C
ATOM 19 O6 G B 491 19.510 164.352 64.783 1.00 73.35 O
ATOM 20 N1 G B 491 19.417 165.959 63.174 1.00 71.52 N
ATOM 21 C2 G B 491 18.897 167.092 62.602 1.00 70.90 C
ATOM 22 N2 G B 491 19.463 167.484 61.448 1.00 70.16 N
ATOM 23 N3 G B 491 17.897 167.785 63.118 1.00 70.45 N
ATOM 24 C4 G B 491 17.447 167.243 64.270 1.00 71.10 C
ATOM 25 P G B 492 11.736 166.857 62.731 1.00 70.98 P
ATOM 26 OP1 G B 492 10.354 167.150 62.271 1.00 73.29 O
ATOM 27 OP2 G B 492 11.995 165.622 63.504 1.00 71.66 O
ATOM 28 O5' G B 492 12.701 166.855 61.463 1.00 67.55 O
TER

Atoms:
C4: (23.859,162.543,61.894)
N3: (22.608,163.126,61.992)
OP1: (27.249,166.145,55.171)
OP2: (27.850,165.012,57.399)
C2: (22.053,164.044,61.135)
C1': (22.292,165.321,59.057)
C3': (23.411,167.344,58.520)
O5': (25.611,166.038,57.084)
O4': (22.991,165.170,57.835)
C5': (24.429,166.388,56.353)
P: (26.841,165.341,56.354)
C4': (23.245,166.478,57.281)
C2': (22.311,166.805,59.432)
O2': (21.040,167.335,59.134)
N1: (22.852,164.390,60.051)
O4: (24.215,161.727,62.746)
O2: (20.948,164.521,61.325)
C6: (24.120,163.857,59.909)
C5: (24.634,162.972,60.770)
O3': (23.187,168.719,58.215)
OP1: (11.013,167.123,68.798)
OP2: (13.216,165.862,69.218)
C3': (13.388,168.076,64.373)
C1': (15.572,168.880,64.742)
C5': (12.547,168.718,66.747)
O6: (19.510,164.352,64.783)
O4': (14.776,169.180,65.881)
C8: (16.300,166.867,66.111)
C2: (18.897,167.092,62.602)
C6: (18.971,165.383,64.357)
C5: (17.896,166.115,64.920)
C4: (17.447,167.243,64.270)
P: (12.504,167.105,68.819)
C4': (13.370,169.063,65.527)
C2': (14.604,168.572,63.598)
O2': (14.362,169.767,62.875)
N1: (19.417,165.959,63.174)
N2: (19.463,167.484,61.448)
N3: (17.897,167.785,63.118)
N7: (17.166,165.891,66.078)
N9: (16.407,167.717,65.039)
O5': (13.026,167.520,67.370)
O3': (12.201,168.138,63.589)
Image (generated by PyMOL):
PyMOL image
show in jmol