ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0953:0961

Extra

PDB:
ATOM 1 O3' A A 952 75.014 69.895 119.942 1.00 60.98 O
ATOM 2 P U A 953 76.013 69.799 121.189 1.00 58.96 P
ATOM 3 OP1 U A 953 76.683 71.116 121.339 1.00 58.43 O
ATOM 4 OP2 U A 953 76.836 68.582 120.989 1.00 58.33 O
ATOM 5 O5' U A 953 75.025 69.578 122.418 1.00 57.09 O
ATOM 6 C5' U A 953 74.057 70.581 122.758 1.00 56.65 C
ATOM 7 C4' U A 953 72.983 70.002 123.645 1.00 58.30 C
ATOM 8 O4' U A 953 72.262 68.966 122.936 1.00 58.50 O
ATOM 9 C3' U A 953 73.455 69.291 124.899 1.00 58.49 C
ATOM 10 O3' U A 953 73.790 70.197 125.939 1.00 59.23 O
ATOM 11 C2' U A 953 72.251 68.427 125.255 1.00 58.01 C
ATOM 12 O2' U A 953 71.212 69.121 125.907 1.00 57.09 O
ATOM 13 C1' U A 953 71.765 68.016 123.870 1.00 58.57 C
ATOM 14 N1 U A 953 72.227 66.674 123.490 1.00 59.83 N
ATOM 15 C2 U A 953 71.521 65.594 123.991 1.00 59.44 C
ATOM 16 O2 U A 953 70.566 65.718 124.738 1.00 57.93 O
ATOM 17 N3 U A 953 71.977 64.366 123.583 1.00 59.47 N
ATOM 18 C4 U A 953 73.046 64.111 122.746 1.00 59.17 C
ATOM 19 O4 U A 953 73.297 62.948 122.420 1.00 60.41 O
ATOM 20 C5 U A 953 73.734 65.277 122.286 1.00 59.45 C
ATOM 21 C6 U A 953 73.314 66.488 122.663 1.00 59.86 C
ATOM 22 P U A 954 74.714 69.695 127.145 1.00 58.31 P
ATOM 23 OP1 U A 954 74.628 70.706 128.225 1.00 58.33 O
ATOM 24 OP2 U A 954 76.038 69.322 126.588 1.00 56.44 O
ATOM 25 O5' U A 954 73.966 68.377 127.636 1.00 62.17 O
TER

ATOM 1 O3' U B 960 64.558 61.749 135.358 1.00 82.43 O
ATOM 2 P G B 961 63.688 62.441 134.192 1.00 79.61 P
ATOM 3 OP1 G B 961 62.544 63.159 134.819 1.00 78.23 O
ATOM 4 OP2 G B 961 63.433 61.437 133.120 1.00 79.03 O
ATOM 5 O5' G B 961 64.690 63.523 133.604 1.00 76.32 O
ATOM 6 C5' G B 961 65.114 64.631 134.410 1.00 71.60 C
ATOM 7 C4' G B 961 65.738 65.691 133.544 1.00 68.35 C
ATOM 8 O4' G B 961 67.037 65.245 133.076 1.00 66.88 O
ATOM 9 C3' G B 961 64.991 65.996 132.261 1.00 66.01 C
ATOM 10 O3' G B 961 63.851 66.819 132.455 1.00 62.87 O
ATOM 11 C2' G B 961 66.074 66.639 131.406 1.00 65.15 C
ATOM 12 O2' G B 961 66.313 67.996 131.716 1.00 65.38 O
ATOM 13 C1' G B 961 67.290 65.798 131.796 1.00 64.95 C
ATOM 14 N9 G B 961 67.550 64.717 130.851 1.00 63.19 N
ATOM 15 C8 G B 961 67.192 63.391 130.947 1.00 61.77 C
ATOM 16 N7 G B 961 67.570 62.685 129.915 1.00 60.92 N
ATOM 17 C5 G B 961 68.215 63.601 129.093 1.00 61.58 C
ATOM 18 C6 G B 961 68.831 63.429 127.833 1.00 60.95 C
ATOM 19 O6 G B 961 68.930 62.401 127.161 1.00 61.74 O
ATOM 20 N1 G B 961 69.366 64.623 127.358 1.00 61.08 N
ATOM 21 C2 G B 961 69.307 65.832 128.009 1.00 62.05 C
ATOM 22 N2 G B 961 69.877 66.877 127.393 1.00 62.77 N
ATOM 23 N3 G B 961 68.732 66.005 129.178 1.00 62.35 N
ATOM 24 C4 G B 961 68.211 64.855 129.659 1.00 62.65 C
ATOM 25 P U B 962 62.819 67.010 131.247 1.00 60.90 P
ATOM 26 OP1 U B 962 61.825 68.061 131.602 1.00 60.19 O
ATOM 27 OP2 U B 962 62.351 65.660 130.838 1.00 59.48 O
ATOM 28 O5' U B 962 63.770 67.567 130.108 1.00 59.31 O
TER

Atoms:
C4: (73.046,64.111,122.746)
N3: (71.977,64.366,123.583)
OP1: (76.683,71.116,121.339)
OP2: (76.836,68.582,120.989)
C2: (71.521,65.594,123.991)
C1': (71.765,68.016,123.870)
C3': (73.455,69.291,124.899)
O5': (75.025,69.578,122.418)
O4': (72.262,68.966,122.936)
C5': (74.057,70.581,122.758)
P: (76.013,69.799,121.189)
C4': (72.983,70.002,123.645)
C2': (72.251,68.427,125.255)
O2': (71.212,69.121,125.907)
N1: (72.227,66.674,123.490)
O4: (73.297,62.948,122.420)
O2: (70.566,65.718,124.738)
C6: (73.314,66.488,122.663)
C5: (73.734,65.277,122.286)
O3': (73.790,70.197,125.939)
OP1: (62.544,63.159,134.819)
OP2: (63.433,61.437,133.120)
C3': (64.991,65.996,132.261)
C1': (67.290,65.798,131.796)
C5': (65.114,64.631,134.410)
O6: (68.930,62.401,127.161)
O4': (67.037,65.245,133.076)
C8: (67.192,63.391,130.947)
C2: (69.307,65.832,128.009)
C6: (68.831,63.429,127.833)
C5: (68.215,63.601,129.093)
C4: (68.211,64.855,129.659)
P: (63.688,62.441,134.192)
C4': (65.738,65.691,133.544)
C2': (66.074,66.639,131.406)
O2': (66.313,67.996,131.716)
N1: (69.366,64.623,127.358)
N2: (69.877,66.877,127.393)
N3: (68.732,66.005,129.178)
N7: (67.570,62.685,129.915)
N9: (67.550,64.717,130.851)
O5': (64.690,63.523,133.604)
O3': (63.851,66.819,132.455)
Image (generated by PyMOL):
PyMOL image
show in jmol