Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ8:0563:0564
Extra
PDB:
ATOM 1 O3' C A 562 -10.058 82.428 131.183 1.00 72.78 O
ATOM 2 P G A 563 -9.055 82.565 132.435 1.00 73.84 P
ATOM 3 OP1 G A 563 -9.559 81.694 133.525 1.00 74.39 O
ATOM 4 OP2 G A 563 -8.833 84.012 132.699 1.00 74.32 O
ATOM 5 O5' G A 563 -7.690 81.947 131.891 1.00 72.80 O
ATOM 6 C5' G A 563 -7.662 80.633 131.297 1.00 71.08 C
ATOM 7 C4' G A 563 -6.341 80.395 130.601 1.00 70.55 C
ATOM 8 O4' G A 563 -6.187 81.323 129.491 1.00 70.42 O
ATOM 9 C3' G A 563 -5.096 80.641 131.435 1.00 70.60 C
ATOM 10 O3' G A 563 -4.802 79.561 132.310 1.00 71.04 O
ATOM 11 C2' G A 563 -4.031 80.838 130.364 1.00 69.87 C
ATOM 12 O2' G A 563 -3.584 79.624 129.787 1.00 69.15 O
ATOM 13 C1' G A 563 -4.811 81.648 129.326 1.00 68.72 C
ATOM 14 N9 G A 563 -4.635 83.088 129.510 1.00 66.99 N
ATOM 15 C8 G A 563 -5.501 83.970 130.115 1.00 66.23 C
ATOM 16 N7 G A 563 -5.048 85.195 130.144 1.00 65.36 N
ATOM 17 C5 G A 563 -3.811 85.120 129.519 1.00 65.54 C
ATOM 18 C6 G A 563 -2.843 86.135 129.261 1.00 65.29 C
ATOM 19 O6 G A 563 -2.887 87.342 129.549 1.00 63.74 O
ATOM 20 N1 G A 563 -1.732 85.620 128.600 1.00 64.07 N
ATOM 21 C2 G A 563 -1.568 84.307 128.235 1.00 64.73 C
ATOM 22 N2 G A 563 -0.431 84.011 127.596 1.00 65.51 N
ATOM 23 N3 G A 563 -2.453 83.354 128.475 1.00 64.84 N
ATOM 24 C4 G A 563 -3.544 83.829 129.116 1.00 65.84 C
ATOM 25 P C A 564 -3.708 79.762 133.468 1.00 72.53 P
ATOM 26 OP1 C A 564 -3.780 78.572 134.361 1.00 72.60 O
ATOM 27 OP2 C A 564 -3.842 81.135 134.046 1.00 70.07 O
ATOM 28 O5' C A 564 -2.326 79.691 132.683 1.00 69.90 O
TER
ATOM 1 O3' G B 563 -4.802 79.561 132.310 1.00 71.04 O
ATOM 2 P C B 564 -3.708 79.762 133.468 1.00 72.53 P
ATOM 3 OP1 C B 564 -3.780 78.572 134.361 1.00 72.60 O
ATOM 4 OP2 C B 564 -3.842 81.135 134.046 1.00 70.07 O
ATOM 5 O5' C B 564 -2.326 79.691 132.683 1.00 69.90 O
ATOM 6 C5' C B 564 -1.121 80.127 133.306 1.00 65.82 C
ATOM 7 C4' C B 564 -0.015 80.229 132.290 1.00 63.08 C
ATOM 8 O4' C B 564 -0.417 81.108 131.203 1.00 62.14 O
ATOM 9 C3' C B 564 1.231 80.883 132.849 1.00 62.05 C
ATOM 10 O3' C B 564 2.012 79.963 133.591 1.00 61.35 O
ATOM 11 C2' C B 564 1.905 81.437 131.603 1.00 59.87 C
ATOM 12 O2' C B 564 2.610 80.454 130.869 1.00 59.56 O
ATOM 13 C1' C B 564 0.686 81.914 130.807 1.00 58.66 C
ATOM 14 N1 C B 564 0.345 83.322 131.074 1.00 55.62 N
ATOM 15 C2 C B 564 1.192 84.330 130.587 1.00 55.19 C
ATOM 16 O2 C B 564 2.212 84.008 129.945 1.00 55.06 O
ATOM 17 N3 C B 564 0.882 85.627 130.830 1.00 54.19 N
ATOM 18 C4 C B 564 -0.213 85.931 131.531 1.00 54.50 C
ATOM 19 N4 C B 564 -0.473 87.220 131.757 1.00 53.97 N
ATOM 20 C5 C B 564 -1.089 84.927 132.037 1.00 54.33 C
ATOM 21 C6 C B 564 -0.776 83.650 131.787 1.00 54.68 C
ATOM 22 P G B 565 2.623 80.418 135.000 1.00 62.78 P
ATOM 23 OP1 G B 565 3.302 79.224 135.583 1.00 62.88 O
ATOM 24 OP2 G B 565 1.559 81.118 135.775 1.00 61.15 O
ATOM 25 O5' G B 565 3.720 81.505 134.592 1.00 62.79 O
TER
ATOM 2 P G A 563 -9.055 82.565 132.435 1.00 73.84 P
ATOM 3 OP1 G A 563 -9.559 81.694 133.525 1.00 74.39 O
ATOM 4 OP2 G A 563 -8.833 84.012 132.699 1.00 74.32 O
ATOM 5 O5' G A 563 -7.690 81.947 131.891 1.00 72.80 O
ATOM 6 C5' G A 563 -7.662 80.633 131.297 1.00 71.08 C
ATOM 7 C4' G A 563 -6.341 80.395 130.601 1.00 70.55 C
ATOM 8 O4' G A 563 -6.187 81.323 129.491 1.00 70.42 O
ATOM 9 C3' G A 563 -5.096 80.641 131.435 1.00 70.60 C
ATOM 10 O3' G A 563 -4.802 79.561 132.310 1.00 71.04 O
ATOM 11 C2' G A 563 -4.031 80.838 130.364 1.00 69.87 C
ATOM 12 O2' G A 563 -3.584 79.624 129.787 1.00 69.15 O
ATOM 13 C1' G A 563 -4.811 81.648 129.326 1.00 68.72 C
ATOM 14 N9 G A 563 -4.635 83.088 129.510 1.00 66.99 N
ATOM 15 C8 G A 563 -5.501 83.970 130.115 1.00 66.23 C
ATOM 16 N7 G A 563 -5.048 85.195 130.144 1.00 65.36 N
ATOM 17 C5 G A 563 -3.811 85.120 129.519 1.00 65.54 C
ATOM 18 C6 G A 563 -2.843 86.135 129.261 1.00 65.29 C
ATOM 19 O6 G A 563 -2.887 87.342 129.549 1.00 63.74 O
ATOM 20 N1 G A 563 -1.732 85.620 128.600 1.00 64.07 N
ATOM 21 C2 G A 563 -1.568 84.307 128.235 1.00 64.73 C
ATOM 22 N2 G A 563 -0.431 84.011 127.596 1.00 65.51 N
ATOM 23 N3 G A 563 -2.453 83.354 128.475 1.00 64.84 N
ATOM 24 C4 G A 563 -3.544 83.829 129.116 1.00 65.84 C
ATOM 25 P C A 564 -3.708 79.762 133.468 1.00 72.53 P
ATOM 26 OP1 C A 564 -3.780 78.572 134.361 1.00 72.60 O
ATOM 27 OP2 C A 564 -3.842 81.135 134.046 1.00 70.07 O
ATOM 28 O5' C A 564 -2.326 79.691 132.683 1.00 69.90 O
TER
ATOM 1 O3' G B 563 -4.802 79.561 132.310 1.00 71.04 O
ATOM 2 P C B 564 -3.708 79.762 133.468 1.00 72.53 P
ATOM 3 OP1 C B 564 -3.780 78.572 134.361 1.00 72.60 O
ATOM 4 OP2 C B 564 -3.842 81.135 134.046 1.00 70.07 O
ATOM 5 O5' C B 564 -2.326 79.691 132.683 1.00 69.90 O
ATOM 6 C5' C B 564 -1.121 80.127 133.306 1.00 65.82 C
ATOM 7 C4' C B 564 -0.015 80.229 132.290 1.00 63.08 C
ATOM 8 O4' C B 564 -0.417 81.108 131.203 1.00 62.14 O
ATOM 9 C3' C B 564 1.231 80.883 132.849 1.00 62.05 C
ATOM 10 O3' C B 564 2.012 79.963 133.591 1.00 61.35 O
ATOM 11 C2' C B 564 1.905 81.437 131.603 1.00 59.87 C
ATOM 12 O2' C B 564 2.610 80.454 130.869 1.00 59.56 O
ATOM 13 C1' C B 564 0.686 81.914 130.807 1.00 58.66 C
ATOM 14 N1 C B 564 0.345 83.322 131.074 1.00 55.62 N
ATOM 15 C2 C B 564 1.192 84.330 130.587 1.00 55.19 C
ATOM 16 O2 C B 564 2.212 84.008 129.945 1.00 55.06 O
ATOM 17 N3 C B 564 0.882 85.627 130.830 1.00 54.19 N
ATOM 18 C4 C B 564 -0.213 85.931 131.531 1.00 54.50 C
ATOM 19 N4 C B 564 -0.473 87.220 131.757 1.00 53.97 N
ATOM 20 C5 C B 564 -1.089 84.927 132.037 1.00 54.33 C
ATOM 21 C6 C B 564 -0.776 83.650 131.787 1.00 54.68 C
ATOM 22 P G B 565 2.623 80.418 135.000 1.00 62.78 P
ATOM 23 OP1 G B 565 3.302 79.224 135.583 1.00 62.88 O
ATOM 24 OP2 G B 565 1.559 81.118 135.775 1.00 61.15 O
ATOM 25 O5' G B 565 3.720 81.505 134.592 1.00 62.79 O
TER
Atoms:
OP1: (-9.559,81.694,133.525)
OP2: (-8.833,84.012,132.699)
C3': (-5.096,80.641,131.435)
C1': (-4.811,81.648,129.326)
C5': (-7.662,80.633,131.297)
O6: (-2.887,87.342,129.549)
O4': (-6.187,81.323,129.491)
C8: (-5.501,83.970,130.115)
C2: (-1.568,84.307,128.235)
C6: (-2.843,86.135,129.261)
C5: (-3.811,85.120,129.519)
C4: (-3.544,83.829,129.116)
P: (-9.055,82.565,132.435)
C4': (-6.341,80.395,130.601)
C2': (-4.031,80.838,130.364)
O2': (-3.584,79.624,129.787)
N1: (-1.732,85.620,128.600)
N2: (-0.431,84.011,127.596)
N3: (-2.453,83.354,128.475)
N7: (-5.048,85.195,130.144)
N9: (-4.635,83.088,129.510)
O5': (-7.690,81.947,131.891)
O3': (-4.802,79.561,132.310)
OP2: (-8.833,84.012,132.699)
C3': (-5.096,80.641,131.435)
C1': (-4.811,81.648,129.326)
C5': (-7.662,80.633,131.297)
O6: (-2.887,87.342,129.549)
O4': (-6.187,81.323,129.491)
C8: (-5.501,83.970,130.115)
C2: (-1.568,84.307,128.235)
C6: (-2.843,86.135,129.261)
C5: (-3.811,85.120,129.519)
C4: (-3.544,83.829,129.116)
P: (-9.055,82.565,132.435)
C4': (-6.341,80.395,130.601)
C2': (-4.031,80.838,130.364)
O2': (-3.584,79.624,129.787)
N1: (-1.732,85.620,128.600)
N2: (-0.431,84.011,127.596)
N3: (-2.453,83.354,128.475)
N7: (-5.048,85.195,130.144)
N9: (-4.635,83.088,129.510)
O5': (-7.690,81.947,131.891)
O3': (-4.802,79.561,132.310)
C2: (1.192,84.330,130.587)
OP1: (-3.780,78.572,134.361)
OP2: (-3.842,81.135,134.046)
C4: (-0.213,85.931,131.531)
O5': (-2.326,79.691,132.683)
C3': (1.231,80.883,132.849)
C1': (0.686,81.914,130.807)
O4': (-0.417,81.108,131.203)
C5': (-1.121,80.127,133.306)
P: (-3.708,79.762,133.468)
O2: (2.212,84.008,129.945)
C4': (-0.015,80.229,132.290)
C2': (1.905,81.437,131.603)
O2': (2.610,80.454,130.869)
N1: (0.345,83.322,131.074)
N3: (0.882,85.627,130.830)
N4: (-0.473,87.220,131.757)
C6: (-0.776,83.650,131.787)
C5: (-1.089,84.927,132.037)
O3': (2.012,79.963,133.591)
OP1: (-3.780,78.572,134.361)
OP2: (-3.842,81.135,134.046)
C4: (-0.213,85.931,131.531)
O5': (-2.326,79.691,132.683)
C3': (1.231,80.883,132.849)
C1': (0.686,81.914,130.807)
O4': (-0.417,81.108,131.203)
C5': (-1.121,80.127,133.306)
P: (-3.708,79.762,133.468)
O2: (2.212,84.008,129.945)
C4': (-0.015,80.229,132.290)
C2': (1.905,81.437,131.603)
O2': (2.610,80.454,130.869)
N1: (0.345,83.322,131.074)
N3: (0.882,85.627,130.830)
N4: (-0.473,87.220,131.757)
C6: (-0.776,83.650,131.787)
C5: (-1.089,84.927,132.037)
O3': (2.012,79.963,133.591)
Image (generated by PyMOL):