Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBY:B29:B30
Extra
PDB:
ATOM 1 O3' G A 28 -18.392 61.157 17.818 1.00108.91 O
ATOM 2 P G A 29 -19.325 62.354 17.288 1.00107.23 P
ATOM 3 OP1 G A 29 -18.428 63.344 16.631 1.00106.76 O
ATOM 4 OP2 G A 29 -20.222 62.790 18.395 1.00105.99 O
ATOM 5 O5' G A 29 -20.220 61.670 16.161 1.00104.12 O
ATOM 6 C5' G A 29 -19.616 61.004 15.058 1.00 98.35 C
ATOM 7 C4' G A 29 -20.532 59.926 14.538 1.00 94.86 C
ATOM 8 O4' G A 29 -20.794 58.963 15.587 1.00 92.95 O
ATOM 9 C3' G A 29 -21.916 60.378 14.105 1.00 93.31 C
ATOM 10 O3' G A 29 -21.914 60.880 12.778 1.00 93.08 O
ATOM 11 C2' G A 29 -22.750 59.107 14.221 1.00 91.64 C
ATOM 12 O2' G A 29 -22.697 58.284 13.079 1.00 91.06 O
ATOM 13 C1' G A 29 -22.069 58.386 15.382 1.00 90.90 C
ATOM 14 N9 G A 29 -22.835 58.452 16.616 1.00 87.97 N
ATOM 15 C8 G A 29 -22.531 59.132 17.769 1.00 86.98 C
ATOM 16 N7 G A 29 -23.432 58.983 18.700 1.00 86.53 N
ATOM 17 C5 G A 29 -24.386 58.157 18.122 1.00 86.27 C
ATOM 18 C6 G A 29 -25.600 57.644 18.647 1.00 86.29 C
ATOM 19 O6 G A 29 -26.092 57.824 19.769 1.00 86.51 O
ATOM 20 N1 G A 29 -26.259 56.846 17.715 1.00 85.12 N
ATOM 21 C2 G A 29 -25.804 56.577 16.445 1.00 84.93 C
ATOM 22 N2 G A 29 -26.571 55.788 15.687 1.00 85.64 N
ATOM 23 N3 G A 29 -24.678 57.049 15.951 1.00 84.90 N
ATOM 24 C4 G A 29 -24.026 57.825 16.837 1.00 86.34 C
ATOM 25 P C A 30 -22.996 61.982 12.352 1.00 93.04 P
ATOM 26 OP1 C A 30 -22.610 62.494 11.009 1.00 92.64 O
ATOM 27 OP2 C A 30 -23.129 62.923 13.494 1.00 93.24 O
ATOM 28 O5' C A 30 -24.359 61.172 12.207 1.00 92.09 O
TER
ATOM 1 O3' G B 29 -21.914 60.880 12.778 1.00 93.08 O
ATOM 2 P C B 30 -22.996 61.982 12.352 1.00 93.04 P
ATOM 3 OP1 C B 30 -22.610 62.494 11.009 1.00 92.64 O
ATOM 4 OP2 C B 30 -23.129 62.923 13.494 1.00 93.24 O
ATOM 5 O5' C B 30 -24.359 61.172 12.207 1.00 92.09 O
ATOM 6 C5' C B 30 -24.565 60.309 11.100 1.00 91.92 C
ATOM 7 C4' C B 30 -25.870 59.571 11.244 1.00 91.39 C
ATOM 8 O4' C B 30 -25.848 58.757 12.442 1.00 91.02 O
ATOM 9 C3' C B 30 -27.106 60.430 11.411 1.00 92.26 C
ATOM 10 O3' C B 30 -27.590 60.920 10.175 1.00 96.59 O
ATOM 11 C2' C B 30 -28.082 59.479 12.090 1.00 89.95 C
ATOM 12 O2' C B 30 -28.699 58.586 11.186 1.00 88.66 O
ATOM 13 C1' C B 30 -27.149 58.694 13.002 1.00 88.38 C
ATOM 14 N1 C B 30 -27.106 59.240 14.368 1.00 85.73 N
ATOM 15 C2 C B 30 -28.145 58.916 15.240 1.00 84.84 C
ATOM 16 O2 C B 30 -29.074 58.211 14.824 1.00 84.08 O
ATOM 17 N3 C B 30 -28.115 59.377 16.509 1.00 84.28 N
ATOM 18 C4 C B 30 -27.097 60.137 16.917 1.00 84.07 C
ATOM 19 N4 C B 30 -27.099 60.547 18.191 1.00 85.11 N
ATOM 20 C5 C B 30 -26.031 60.502 16.043 1.00 82.97 C
ATOM 21 C6 C B 30 -26.076 60.038 14.788 1.00 84.09 C
ATOM 22 P G B 31 -28.286 62.368 10.127 1.00 99.69 P
ATOM 23 OP1 G B 31 -27.748 63.171 11.262 1.00 99.09 O
ATOM 24 OP2 G B 31 -29.756 62.175 9.986 1.00 98.25 O
ATOM 25 O5' G B 31 -27.735 62.991 8.774 1.00100.49 O
TER
ATOM 2 P G A 29 -19.325 62.354 17.288 1.00107.23 P
ATOM 3 OP1 G A 29 -18.428 63.344 16.631 1.00106.76 O
ATOM 4 OP2 G A 29 -20.222 62.790 18.395 1.00105.99 O
ATOM 5 O5' G A 29 -20.220 61.670 16.161 1.00104.12 O
ATOM 6 C5' G A 29 -19.616 61.004 15.058 1.00 98.35 C
ATOM 7 C4' G A 29 -20.532 59.926 14.538 1.00 94.86 C
ATOM 8 O4' G A 29 -20.794 58.963 15.587 1.00 92.95 O
ATOM 9 C3' G A 29 -21.916 60.378 14.105 1.00 93.31 C
ATOM 10 O3' G A 29 -21.914 60.880 12.778 1.00 93.08 O
ATOM 11 C2' G A 29 -22.750 59.107 14.221 1.00 91.64 C
ATOM 12 O2' G A 29 -22.697 58.284 13.079 1.00 91.06 O
ATOM 13 C1' G A 29 -22.069 58.386 15.382 1.00 90.90 C
ATOM 14 N9 G A 29 -22.835 58.452 16.616 1.00 87.97 N
ATOM 15 C8 G A 29 -22.531 59.132 17.769 1.00 86.98 C
ATOM 16 N7 G A 29 -23.432 58.983 18.700 1.00 86.53 N
ATOM 17 C5 G A 29 -24.386 58.157 18.122 1.00 86.27 C
ATOM 18 C6 G A 29 -25.600 57.644 18.647 1.00 86.29 C
ATOM 19 O6 G A 29 -26.092 57.824 19.769 1.00 86.51 O
ATOM 20 N1 G A 29 -26.259 56.846 17.715 1.00 85.12 N
ATOM 21 C2 G A 29 -25.804 56.577 16.445 1.00 84.93 C
ATOM 22 N2 G A 29 -26.571 55.788 15.687 1.00 85.64 N
ATOM 23 N3 G A 29 -24.678 57.049 15.951 1.00 84.90 N
ATOM 24 C4 G A 29 -24.026 57.825 16.837 1.00 86.34 C
ATOM 25 P C A 30 -22.996 61.982 12.352 1.00 93.04 P
ATOM 26 OP1 C A 30 -22.610 62.494 11.009 1.00 92.64 O
ATOM 27 OP2 C A 30 -23.129 62.923 13.494 1.00 93.24 O
ATOM 28 O5' C A 30 -24.359 61.172 12.207 1.00 92.09 O
TER
ATOM 1 O3' G B 29 -21.914 60.880 12.778 1.00 93.08 O
ATOM 2 P C B 30 -22.996 61.982 12.352 1.00 93.04 P
ATOM 3 OP1 C B 30 -22.610 62.494 11.009 1.00 92.64 O
ATOM 4 OP2 C B 30 -23.129 62.923 13.494 1.00 93.24 O
ATOM 5 O5' C B 30 -24.359 61.172 12.207 1.00 92.09 O
ATOM 6 C5' C B 30 -24.565 60.309 11.100 1.00 91.92 C
ATOM 7 C4' C B 30 -25.870 59.571 11.244 1.00 91.39 C
ATOM 8 O4' C B 30 -25.848 58.757 12.442 1.00 91.02 O
ATOM 9 C3' C B 30 -27.106 60.430 11.411 1.00 92.26 C
ATOM 10 O3' C B 30 -27.590 60.920 10.175 1.00 96.59 O
ATOM 11 C2' C B 30 -28.082 59.479 12.090 1.00 89.95 C
ATOM 12 O2' C B 30 -28.699 58.586 11.186 1.00 88.66 O
ATOM 13 C1' C B 30 -27.149 58.694 13.002 1.00 88.38 C
ATOM 14 N1 C B 30 -27.106 59.240 14.368 1.00 85.73 N
ATOM 15 C2 C B 30 -28.145 58.916 15.240 1.00 84.84 C
ATOM 16 O2 C B 30 -29.074 58.211 14.824 1.00 84.08 O
ATOM 17 N3 C B 30 -28.115 59.377 16.509 1.00 84.28 N
ATOM 18 C4 C B 30 -27.097 60.137 16.917 1.00 84.07 C
ATOM 19 N4 C B 30 -27.099 60.547 18.191 1.00 85.11 N
ATOM 20 C5 C B 30 -26.031 60.502 16.043 1.00 82.97 C
ATOM 21 C6 C B 30 -26.076 60.038 14.788 1.00 84.09 C
ATOM 22 P G B 31 -28.286 62.368 10.127 1.00 99.69 P
ATOM 23 OP1 G B 31 -27.748 63.171 11.262 1.00 99.09 O
ATOM 24 OP2 G B 31 -29.756 62.175 9.986 1.00 98.25 O
ATOM 25 O5' G B 31 -27.735 62.991 8.774 1.00100.49 O
TER
Atoms:
OP1: (-18.428,63.344,16.631)
OP2: (-20.222,62.790,18.395)
C3': (-21.916,60.378,14.105)
C1': (-22.069,58.386,15.382)
C5': (-19.616,61.004,15.058)
O6: (-26.092,57.824,19.769)
O4': (-20.794,58.963,15.587)
C8: (-22.531,59.132,17.769)
C2: (-25.804,56.577,16.445)
C6: (-25.600,57.644,18.647)
C5: (-24.386,58.157,18.122)
C4: (-24.026,57.825,16.837)
P: (-19.325,62.354,17.288)
C4': (-20.532,59.926,14.538)
C2': (-22.750,59.107,14.221)
O2': (-22.697,58.284,13.079)
N1: (-26.259,56.846,17.715)
N2: (-26.571,55.788,15.687)
N3: (-24.678,57.049,15.951)
N7: (-23.432,58.983,18.700)
N9: (-22.835,58.452,16.616)
O5': (-20.220,61.670,16.161)
O3': (-21.914,60.880,12.778)
OP2: (-20.222,62.790,18.395)
C3': (-21.916,60.378,14.105)
C1': (-22.069,58.386,15.382)
C5': (-19.616,61.004,15.058)
O6: (-26.092,57.824,19.769)
O4': (-20.794,58.963,15.587)
C8: (-22.531,59.132,17.769)
C2: (-25.804,56.577,16.445)
C6: (-25.600,57.644,18.647)
C5: (-24.386,58.157,18.122)
C4: (-24.026,57.825,16.837)
P: (-19.325,62.354,17.288)
C4': (-20.532,59.926,14.538)
C2': (-22.750,59.107,14.221)
O2': (-22.697,58.284,13.079)
N1: (-26.259,56.846,17.715)
N2: (-26.571,55.788,15.687)
N3: (-24.678,57.049,15.951)
N7: (-23.432,58.983,18.700)
N9: (-22.835,58.452,16.616)
O5': (-20.220,61.670,16.161)
O3': (-21.914,60.880,12.778)
C2: (-28.145,58.916,15.240)
OP1: (-22.610,62.494,11.009)
OP2: (-23.129,62.923,13.494)
C4: (-27.097,60.137,16.917)
O5': (-24.359,61.172,12.207)
C3': (-27.106,60.430,11.411)
C1': (-27.149,58.694,13.002)
O4': (-25.848,58.757,12.442)
C5': (-24.565,60.309,11.100)
P: (-22.996,61.982,12.352)
O2: (-29.074,58.211,14.824)
C4': (-25.870,59.571,11.244)
C2': (-28.082,59.479,12.090)
O2': (-28.699,58.586,11.186)
N1: (-27.106,59.240,14.368)
N3: (-28.115,59.377,16.509)
N4: (-27.099,60.547,18.191)
C6: (-26.076,60.038,14.788)
C5: (-26.031,60.502,16.043)
O3': (-27.590,60.920,10.175)
OP1: (-22.610,62.494,11.009)
OP2: (-23.129,62.923,13.494)
C4: (-27.097,60.137,16.917)
O5': (-24.359,61.172,12.207)
C3': (-27.106,60.430,11.411)
C1': (-27.149,58.694,13.002)
O4': (-25.848,58.757,12.442)
C5': (-24.565,60.309,11.100)
P: (-22.996,61.982,12.352)
O2: (-29.074,58.211,14.824)
C4': (-25.870,59.571,11.244)
C2': (-28.082,59.479,12.090)
O2': (-28.699,58.586,11.186)
N1: (-27.106,59.240,14.368)
N3: (-28.115,59.377,16.509)
N4: (-27.099,60.547,18.191)
C6: (-26.076,60.038,14.788)
C5: (-26.031,60.502,16.043)
O3': (-27.590,60.920,10.175)
Image (generated by PyMOL):