ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QRS:B11:B6

Extra

PDB:
ATOM 1 O3' C A 10 29.315 23.139 24.598 1.00 12.67 O
ATOM 2 P A A 11 28.754 24.626 24.754 1.00 10.53 P
ATOM 3 OP1 A A 11 29.619 25.584 24.047 1.00 11.54 O
ATOM 4 OP2 A A 11 28.484 24.822 26.194 1.00 12.26 O
ATOM 5 O5' A A 11 27.343 24.577 24.024 1.00 14.92 O
ATOM 6 C5' A A 11 27.199 23.986 22.739 1.00 18.61 C
ATOM 7 C4' A A 11 25.735 23.839 22.405 1.00 22.29 C
ATOM 8 O4' A A 11 25.142 22.814 23.243 1.00 24.57 O
ATOM 9 C3' A A 11 24.877 25.071 22.650 1.00 23.07 C
ATOM 10 O3' A A 11 24.966 25.924 21.516 1.00 22.52 O
ATOM 11 C2' A A 11 23.487 24.456 22.803 1.00 24.57 C
ATOM 12 O2' A A 11 22.936 24.085 21.558 1.00 25.38 O
ATOM 13 C1' A A 11 23.801 23.161 23.552 1.00 24.86 C
ATOM 14 N9 A A 11 23.662 23.231 25.009 1.00 26.68 N
ATOM 15 C8 A A 11 24.660 23.363 25.937 1.00 27.08 C
ATOM 16 N7 A A 11 24.232 23.396 27.173 1.00 27.77 N
ATOM 17 C5 A A 11 22.857 23.283 27.053 1.00 28.89 C
ATOM 18 C6 A A 11 21.822 23.266 28.004 1.00 29.74 C
ATOM 19 N6 A A 11 22.014 23.401 29.319 1.00 30.59 N
ATOM 20 N1 A A 11 20.560 23.116 27.553 1.00 31.03 N
ATOM 21 C2 A A 11 20.360 23.009 26.240 1.00 30.06 C
ATOM 22 N3 A A 11 21.244 23.029 25.250 1.00 30.60 N
ATOM 23 C4 A A 11 22.492 23.171 25.727 1.00 28.49 C
ATOM 24 P A A 12 24.375 27.414 21.570 1.00 23.18 P
ATOM 25 OP1 A A 12 24.766 28.101 20.323 1.00 24.80 O
ATOM 26 OP2 A A 12 24.739 28.008 22.870 1.00 27.21 O
ATOM 27 O5' A A 12 22.789 27.231 21.535 1.00 25.43 O
TER

ATOM 1 O3' A B 5 26.168 28.876 33.357 1.00 23.11 O
ATOM 2 P U B 6 26.061 27.571 32.432 1.00 23.88 P
ATOM 3 OP1 U B 6 26.671 26.453 33.181 1.00 25.00 O
ATOM 4 OP2 U B 6 26.552 27.897 31.079 1.00 27.82 O
ATOM 5 O5' U B 6 24.497 27.291 32.343 1.00 26.52 O
ATOM 6 C5' U B 6 23.671 27.368 33.501 1.00 24.73 C
ATOM 7 C4' U B 6 22.288 26.900 33.166 1.00 24.12 C
ATOM 8 O4' U B 6 21.785 27.727 32.088 1.00 23.64 O
ATOM 9 C3' U B 6 22.214 25.504 32.581 1.00 26.98 C
ATOM 10 O3' U B 6 22.203 24.506 33.587 1.00 32.28 O
ATOM 11 C2' U B 6 20.883 25.566 31.867 1.00 26.25 C
ATOM 12 O2' U B 6 19.827 25.576 32.794 1.00 29.23 O
ATOM 13 C1' U B 6 20.968 26.948 31.234 1.00 24.89 C
ATOM 14 N1 U B 6 21.577 26.871 29.896 1.00 24.59 N
ATOM 15 C2 U B 6 20.747 26.481 28.872 1.00 25.72 C
ATOM 16 O2 U B 6 19.555 26.238 29.043 1.00 25.86 O
ATOM 17 N3 U B 6 21.345 26.389 27.634 1.00 26.51 N
ATOM 18 C4 U B 6 22.656 26.669 27.305 1.00 25.09 C
ATOM 19 O4 U B 6 23.008 26.641 26.102 1.00 19.63 O
ATOM 20 C5 U B 6 23.462 27.073 28.431 1.00 23.92 C
ATOM 21 C6 U B 6 22.907 27.156 29.657 1.00 23.20 C
ATOM 22 P C B 7 23.272 23.304 33.526 1.00 37.15 P
ATOM 23 OP1 C B 7 24.212 23.487 34.668 1.00 37.66 O
ATOM 24 OP2 C B 7 23.789 23.279 32.137 1.00 36.16 O
ATOM 25 O5' C B 7 22.400 21.993 33.802 1.00 38.85 O
TER

Atoms:
OP1: (29.619,25.584,24.047)
OP2: (28.484,24.822,26.194)
C3': (24.877,25.071,22.650)
C1': (23.801,23.161,23.552)
C5': (27.199,23.986,22.739)
O4': (25.142,22.814,23.243)
C8: (24.660,23.363,25.937)
O2': (22.936,24.085,21.558)
C6: (21.822,23.266,28.004)
C5: (22.857,23.283,27.053)
C4: (22.492,23.171,25.727)
P: (28.754,24.626,24.754)
C4': (25.735,23.839,22.405)
C2': (23.487,24.456,22.803)
C2: (20.360,23.009,26.240)
N1: (20.560,23.116,27.553)
N3: (21.244,23.029,25.250)
N6: (22.014,23.401,29.319)
N7: (24.232,23.396,27.173)
N9: (23.662,23.231,25.009)
O5': (27.343,24.577,24.024)
O3': (24.966,25.924,21.516)
C4: (22.656,26.669,27.305)
N3: (21.345,26.389,27.634)
OP1: (26.671,26.453,33.181)
OP2: (26.552,27.897,31.079)
C2: (20.747,26.481,28.872)
C1': (20.968,26.948,31.234)
C3': (22.214,25.504,32.581)
O5': (24.497,27.291,32.343)
O4': (21.785,27.727,32.088)
C5': (23.671,27.368,33.501)
P: (26.061,27.571,32.432)
C4': (22.288,26.900,33.166)
C2': (20.883,25.566,31.867)
O2': (19.827,25.576,32.794)
N1: (21.577,26.871,29.896)
O4: (23.008,26.641,26.102)
O2: (19.555,26.238,29.043)
C6: (22.907,27.156,29.657)
C5: (23.462,27.073,28.431)
O3': (22.203,24.506,33.587)
Image (generated by PyMOL):
PyMOL image
show in jmol