Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Y27:X61:X36
Extra
PDB:
ATOM 1 O3' C A 60 11.064 -19.067 15.145 1.00 48.22 O
ATOM 2 P U A 61 10.531 -19.255 13.647 1.00 46.50 P
ATOM 3 OP1 U A 61 10.323 -20.705 13.440 1.00 47.04 O
ATOM 4 OP2 U A 61 11.424 -18.513 12.736 1.00 46.29 O
ATOM 5 O5' U A 61 9.104 -18.518 13.649 1.00 48.14 O
ATOM 6 C5' U A 61 7.909 -19.126 14.163 1.00 47.63 C
ATOM 7 C4' U A 61 6.728 -18.173 14.050 1.00 47.80 C
ATOM 8 O4' U A 61 6.960 -16.977 14.853 1.00 47.43 O
ATOM 9 C3' U A 61 6.459 -17.601 12.662 1.00 47.80 C
ATOM 10 O3' U A 61 5.779 -18.532 11.831 1.00 48.97 O
ATOM 11 C2' U A 61 5.615 -16.380 13.021 1.00 47.32 C
ATOM 12 O2' U A 61 4.310 -16.718 13.458 1.00 47.66 O
ATOM 13 C1' U A 61 6.415 -15.833 14.199 1.00 46.14 C
ATOM 14 N1 U A 61 7.495 -14.824 13.809 1.00 45.42 N
ATOM 15 C2 U A 61 7.153 -13.486 13.590 1.00 45.07 C
ATOM 16 O2 U A 61 6.019 -13.030 13.690 1.00 44.75 O
ATOM 17 N3 U A 61 8.205 -12.667 13.245 1.00 44.35 N
ATOM 18 C4 U A 61 9.534 -13.027 13.096 1.00 45.16 C
ATOM 19 O4 U A 61 10.363 -12.181 12.780 1.00 44.41 O
ATOM 20 C5 U A 61 9.815 -14.425 13.336 1.00 44.74 C
ATOM 21 C6 U A 61 8.809 -15.246 13.674 1.00 44.68 C
ATOM 22 P A A 62 5.986 -18.521 10.238 1.00 48.11 P
ATOM 23 OP1 A A 62 5.437 -19.788 9.710 1.00 48.94 O
ATOM 24 OP2 A A 62 7.383 -18.144 9.954 1.00 49.98 O
ATOM 25 O5' A A 62 5.059 -17.327 9.746 1.00 48.92 O
TER
ATOM 1 O3' U B 35 -2.994 -11.547 12.094 1.00 46.70 O
ATOM 2 P C B 36 -3.700 -11.762 13.504 1.00 46.49 P
ATOM 3 OP1 C B 36 -5.019 -11.085 13.530 1.00 45.80 O
ATOM 4 OP2 C B 36 -2.675 -11.471 14.531 1.00 45.28 O
ATOM 5 O5' C B 36 -4.040 -13.311 13.469 1.00 46.83 O
ATOM 6 C5' C B 36 -3.028 -14.131 13.930 1.00 47.29 C
ATOM 7 C4' C B 36 -3.078 -15.507 13.321 1.00 47.17 C
ATOM 8 O4' C B 36 -2.402 -15.529 12.035 1.00 46.75 O
ATOM 9 C3' C B 36 -2.285 -16.414 14.231 1.00 46.86 C
ATOM 10 O3' C B 36 -3.203 -17.085 15.071 1.00 46.89 O
ATOM 11 C2' C B 36 -1.515 -17.295 13.254 1.00 46.82 C
ATOM 12 O2' C B 36 -2.289 -18.370 12.747 1.00 47.51 O
ATOM 13 C1' C B 36 -1.199 -16.272 12.157 1.00 45.95 C
ATOM 14 N1 C B 36 -0.029 -15.327 12.435 1.00 45.83 N
ATOM 15 C2 C B 36 1.232 -15.815 12.849 1.00 45.33 C
ATOM 16 O2 C B 36 1.409 -17.029 13.002 1.00 45.04 O
ATOM 17 N3 C B 36 2.240 -14.929 13.094 1.00 44.56 N
ATOM 18 C4 C B 36 2.046 -13.618 12.938 1.00 44.30 C
ATOM 19 N4 C B 36 3.071 -12.799 13.179 1.00 44.64 N
ATOM 20 C5 C B 36 0.791 -13.096 12.514 1.00 44.63 C
ATOM 21 C6 C B 36 -0.197 -13.971 12.275 1.00 45.44 C
ATOM 22 P U B 37 -3.392 -16.628 16.596 1.00 47.05 P
ATOM 23 OP1 U B 37 -4.411 -17.521 17.205 1.00 47.95 O
ATOM 24 OP2 U B 37 -3.600 -15.167 16.655 1.00 46.92 O
ATOM 25 O5' U B 37 -1.978 -16.979 17.247 1.00 47.24 O
TER
ATOM 2 P U A 61 10.531 -19.255 13.647 1.00 46.50 P
ATOM 3 OP1 U A 61 10.323 -20.705 13.440 1.00 47.04 O
ATOM 4 OP2 U A 61 11.424 -18.513 12.736 1.00 46.29 O
ATOM 5 O5' U A 61 9.104 -18.518 13.649 1.00 48.14 O
ATOM 6 C5' U A 61 7.909 -19.126 14.163 1.00 47.63 C
ATOM 7 C4' U A 61 6.728 -18.173 14.050 1.00 47.80 C
ATOM 8 O4' U A 61 6.960 -16.977 14.853 1.00 47.43 O
ATOM 9 C3' U A 61 6.459 -17.601 12.662 1.00 47.80 C
ATOM 10 O3' U A 61 5.779 -18.532 11.831 1.00 48.97 O
ATOM 11 C2' U A 61 5.615 -16.380 13.021 1.00 47.32 C
ATOM 12 O2' U A 61 4.310 -16.718 13.458 1.00 47.66 O
ATOM 13 C1' U A 61 6.415 -15.833 14.199 1.00 46.14 C
ATOM 14 N1 U A 61 7.495 -14.824 13.809 1.00 45.42 N
ATOM 15 C2 U A 61 7.153 -13.486 13.590 1.00 45.07 C
ATOM 16 O2 U A 61 6.019 -13.030 13.690 1.00 44.75 O
ATOM 17 N3 U A 61 8.205 -12.667 13.245 1.00 44.35 N
ATOM 18 C4 U A 61 9.534 -13.027 13.096 1.00 45.16 C
ATOM 19 O4 U A 61 10.363 -12.181 12.780 1.00 44.41 O
ATOM 20 C5 U A 61 9.815 -14.425 13.336 1.00 44.74 C
ATOM 21 C6 U A 61 8.809 -15.246 13.674 1.00 44.68 C
ATOM 22 P A A 62 5.986 -18.521 10.238 1.00 48.11 P
ATOM 23 OP1 A A 62 5.437 -19.788 9.710 1.00 48.94 O
ATOM 24 OP2 A A 62 7.383 -18.144 9.954 1.00 49.98 O
ATOM 25 O5' A A 62 5.059 -17.327 9.746 1.00 48.92 O
TER
ATOM 1 O3' U B 35 -2.994 -11.547 12.094 1.00 46.70 O
ATOM 2 P C B 36 -3.700 -11.762 13.504 1.00 46.49 P
ATOM 3 OP1 C B 36 -5.019 -11.085 13.530 1.00 45.80 O
ATOM 4 OP2 C B 36 -2.675 -11.471 14.531 1.00 45.28 O
ATOM 5 O5' C B 36 -4.040 -13.311 13.469 1.00 46.83 O
ATOM 6 C5' C B 36 -3.028 -14.131 13.930 1.00 47.29 C
ATOM 7 C4' C B 36 -3.078 -15.507 13.321 1.00 47.17 C
ATOM 8 O4' C B 36 -2.402 -15.529 12.035 1.00 46.75 O
ATOM 9 C3' C B 36 -2.285 -16.414 14.231 1.00 46.86 C
ATOM 10 O3' C B 36 -3.203 -17.085 15.071 1.00 46.89 O
ATOM 11 C2' C B 36 -1.515 -17.295 13.254 1.00 46.82 C
ATOM 12 O2' C B 36 -2.289 -18.370 12.747 1.00 47.51 O
ATOM 13 C1' C B 36 -1.199 -16.272 12.157 1.00 45.95 C
ATOM 14 N1 C B 36 -0.029 -15.327 12.435 1.00 45.83 N
ATOM 15 C2 C B 36 1.232 -15.815 12.849 1.00 45.33 C
ATOM 16 O2 C B 36 1.409 -17.029 13.002 1.00 45.04 O
ATOM 17 N3 C B 36 2.240 -14.929 13.094 1.00 44.56 N
ATOM 18 C4 C B 36 2.046 -13.618 12.938 1.00 44.30 C
ATOM 19 N4 C B 36 3.071 -12.799 13.179 1.00 44.64 N
ATOM 20 C5 C B 36 0.791 -13.096 12.514 1.00 44.63 C
ATOM 21 C6 C B 36 -0.197 -13.971 12.275 1.00 45.44 C
ATOM 22 P U B 37 -3.392 -16.628 16.596 1.00 47.05 P
ATOM 23 OP1 U B 37 -4.411 -17.521 17.205 1.00 47.95 O
ATOM 24 OP2 U B 37 -3.600 -15.167 16.655 1.00 46.92 O
ATOM 25 O5' U B 37 -1.978 -16.979 17.247 1.00 47.24 O
TER
Atoms:
C4: (9.534,-13.027,13.096)
N3: (8.205,-12.667,13.245)
OP1: (10.323,-20.705,13.440)
OP2: (11.424,-18.513,12.736)
C2: (7.153,-13.486,13.590)
C1': (6.415,-15.833,14.199)
C3': (6.459,-17.601,12.662)
O5': (9.104,-18.518,13.649)
O4': (6.960,-16.977,14.853)
C5': (7.909,-19.126,14.163)
P: (10.531,-19.255,13.647)
C4': (6.728,-18.173,14.050)
C2': (5.615,-16.380,13.021)
O2': (4.310,-16.718,13.458)
N1: (7.495,-14.824,13.809)
O4: (10.363,-12.181,12.780)
O2: (6.019,-13.030,13.690)
C6: (8.809,-15.246,13.674)
C5: (9.815,-14.425,13.336)
O3': (5.779,-18.532,11.831)
N3: (8.205,-12.667,13.245)
OP1: (10.323,-20.705,13.440)
OP2: (11.424,-18.513,12.736)
C2: (7.153,-13.486,13.590)
C1': (6.415,-15.833,14.199)
C3': (6.459,-17.601,12.662)
O5': (9.104,-18.518,13.649)
O4': (6.960,-16.977,14.853)
C5': (7.909,-19.126,14.163)
P: (10.531,-19.255,13.647)
C4': (6.728,-18.173,14.050)
C2': (5.615,-16.380,13.021)
O2': (4.310,-16.718,13.458)
N1: (7.495,-14.824,13.809)
O4: (10.363,-12.181,12.780)
O2: (6.019,-13.030,13.690)
C6: (8.809,-15.246,13.674)
C5: (9.815,-14.425,13.336)
O3': (5.779,-18.532,11.831)
C2: (1.232,-15.815,12.849)
OP1: (-5.019,-11.085,13.530)
OP2: (-2.675,-11.471,14.531)
C4: (2.046,-13.618,12.938)
O5': (-4.040,-13.311,13.469)
C3': (-2.285,-16.414,14.231)
C1': (-1.199,-16.272,12.157)
O4': (-2.402,-15.529,12.035)
C5': (-3.028,-14.131,13.930)
P: (-3.700,-11.762,13.504)
O2: (1.409,-17.029,13.002)
C4': (-3.078,-15.507,13.321)
C2': (-1.515,-17.295,13.254)
O2': (-2.289,-18.370,12.747)
N1: (-0.029,-15.327,12.435)
N3: (2.240,-14.929,13.094)
N4: (3.071,-12.799,13.179)
C6: (-0.197,-13.971,12.275)
C5: (0.791,-13.096,12.514)
O3': (-3.203,-17.085,15.071)
OP1: (-5.019,-11.085,13.530)
OP2: (-2.675,-11.471,14.531)
C4: (2.046,-13.618,12.938)
O5': (-4.040,-13.311,13.469)
C3': (-2.285,-16.414,14.231)
C1': (-1.199,-16.272,12.157)
O4': (-2.402,-15.529,12.035)
C5': (-3.028,-14.131,13.930)
P: (-3.700,-11.762,13.504)
O2: (1.409,-17.029,13.002)
C4': (-3.078,-15.507,13.321)
C2': (-1.515,-17.295,13.254)
O2': (-2.289,-18.370,12.747)
N1: (-0.029,-15.327,12.435)
N3: (2.240,-14.929,13.094)
N4: (3.071,-12.799,13.179)
C6: (-0.197,-13.971,12.275)
C5: (0.791,-13.096,12.514)
O3': (-3.203,-17.085,15.071)
Image (generated by PyMOL):