ClaRNA

Doublet info:

Details

Nucleotide types: UC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2EEU:A60:A35

Extra

PDB:
ATOM 1 O3' C A 59 9.989 10.939 17.608 1.00 32.25 O
ATOM 2 P U A 60 8.413 10.721 17.385 1.00 31.71 P
ATOM 3 OP1 U A 60 7.712 11.349 18.537 1.00 33.74 O
ATOM 4 OP2 U A 60 8.200 9.281 17.095 1.00 30.57 O
ATOM 5 O5' U A 60 8.087 11.559 16.068 1.00 31.40 O
ATOM 6 C5' U A 60 8.242 12.977 16.046 1.00 31.62 C
ATOM 7 C4' U A 60 7.966 13.523 14.660 1.00 31.30 C
ATOM 8 O4' U A 60 9.055 13.166 13.761 1.00 32.45 O
ATOM 9 C3' U A 60 6.728 13.002 13.946 1.00 31.86 C
ATOM 10 O3' U A 60 5.545 13.660 14.397 1.00 33.76 O
ATOM 11 C2' U A 60 7.062 13.348 12.500 1.00 30.32 C
ATOM 12 O2' U A 60 6.941 14.727 12.220 1.00 30.17 O
ATOM 13 C1' U A 60 8.543 12.968 12.449 1.00 30.21 C
ATOM 14 N1 U A 60 8.747 11.560 12.082 1.00 28.63 N
ATOM 15 C2 U A 60 8.776 11.242 10.739 1.00 27.41 C
ATOM 16 O2 U A 60 8.661 12.074 9.857 1.00 30.18 O
ATOM 17 N3 U A 60 8.949 9.913 10.465 1.00 26.17 N
ATOM 18 C4 U A 60 9.097 8.894 11.371 1.00 24.83 C
ATOM 19 O4 U A 60 9.183 7.741 10.966 1.00 24.98 O
ATOM 20 C5 U A 60 9.072 9.302 12.741 1.00 26.90 C
ATOM 21 C6 U A 60 8.900 10.588 13.042 1.00 27.32 C
ATOM 22 P A A 61 4.135 12.882 14.365 1.00 34.59 P
ATOM 23 OP1 A A 61 3.136 13.723 15.068 1.00 35.84 O
ATOM 24 OP2 A A 61 4.346 11.481 14.807 1.00 34.53 O
ATOM 25 O5' A A 61 3.745 12.860 12.819 1.00 33.35 O
TER

ATOM 1 O3' U B 34 4.782 18.482 4.168 1.00 37.88 O
ATOM 2 P C B 35 5.776 19.738 4.287 1.00 41.10 P
ATOM 3 OP1 C B 35 5.196 20.873 3.523 1.00 40.05 O
ATOM 4 OP2 C B 35 7.149 19.271 3.971 1.00 39.99 O
ATOM 5 O5' C B 35 5.717 20.109 5.833 1.00 40.35 O
ATOM 6 C5' C B 35 4.575 20.761 6.378 1.00 38.23 C
ATOM 7 C4' C B 35 4.428 20.409 7.835 1.00 38.08 C
ATOM 8 O4' C B 35 4.045 19.015 7.956 1.00 37.20 O
ATOM 9 C3' C B 35 5.704 20.492 8.651 1.00 37.29 C
ATOM 10 O3' C B 35 5.954 21.833 9.045 1.00 39.14 O
ATOM 11 C2' C B 35 5.366 19.605 9.841 1.00 36.94 C
ATOM 12 O2' C B 35 4.535 20.258 10.783 1.00 35.75 O
ATOM 13 C1' C B 35 4.572 18.487 9.161 1.00 36.43 C
ATOM 14 N1 C B 35 5.366 17.296 8.832 1.00 35.42 N
ATOM 15 C2 C B 35 5.788 16.462 9.868 1.00 34.80 C
ATOM 16 O2 C B 35 5.501 16.766 11.036 1.00 35.25 O
ATOM 17 N3 C B 35 6.495 15.346 9.574 1.00 33.48 N
ATOM 18 C4 C B 35 6.785 15.056 8.305 1.00 33.30 C
ATOM 19 N4 C B 35 7.469 13.936 8.060 1.00 31.80 N
ATOM 20 C5 C B 35 6.380 15.899 7.227 1.00 33.34 C
ATOM 21 C6 C B 35 5.679 16.999 7.534 1.00 34.67 C
ATOM 22 P U B 36 7.454 22.395 9.015 1.00 40.68 P
ATOM 23 OP1 U B 36 7.474 23.722 9.686 1.00 41.59 O
ATOM 24 OP2 U B 36 7.964 22.265 7.624 1.00 39.44 O
ATOM 25 O5' U B 36 8.248 21.363 9.928 1.00 40.28 O
TER

Atoms:
C4: (9.097,8.894,11.371)
N3: (8.949,9.913,10.465)
OP1: (7.712,11.349,18.537)
OP2: (8.200,9.281,17.095)
C2: (8.776,11.242,10.739)
C1': (8.543,12.968,12.449)
C3': (6.728,13.002,13.946)
O5': (8.087,11.559,16.068)
O4': (9.055,13.166,13.761)
C5': (8.242,12.977,16.046)
P: (8.413,10.721,17.385)
C4': (7.966,13.523,14.660)
C2': (7.062,13.348,12.500)
O2': (6.941,14.727,12.220)
N1: (8.747,11.560,12.082)
O4: (9.183,7.741,10.966)
O2: (8.661,12.074,9.857)
C6: (8.900,10.588,13.042)
C5: (9.072,9.302,12.741)
O3': (5.545,13.660,14.397)
C2: (5.788,16.462,9.868)
OP1: (5.196,20.873,3.523)
OP2: (7.149,19.271,3.971)
C4: (6.785,15.056,8.305)
O5': (5.717,20.109,5.833)
C3': (5.704,20.492,8.651)
C1': (4.572,18.487,9.161)
O4': (4.045,19.015,7.956)
C5': (4.575,20.761,6.378)
P: (5.776,19.738,4.287)
O2: (5.501,16.766,11.036)
C4': (4.428,20.409,7.835)
C2': (5.366,19.605,9.841)
O2': (4.535,20.258,10.783)
N1: (5.366,17.296,8.832)
N3: (6.495,15.346,9.574)
N4: (7.469,13.936,8.060)
C6: (5.679,16.999,7.534)
C5: (6.380,15.899,7.227)
O3': (5.954,21.833,9.045)
Image (generated by PyMOL):
PyMOL image
show in jmol