Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A61:A62
Extra
PDB:
ATOM 1 O3' C A 60 5.180 49.397 11.582 1.00 29.53 O
ATOM 2 P G A 61 5.324 50.927 12.077 1.00 27.31 P
ATOM 3 OP1 G A 61 6.678 51.284 11.587 1.00 27.95 O
ATOM 4 OP2 G A 61 5.008 50.975 13.519 1.00 27.79 O
ATOM 5 O5' G A 61 4.178 51.707 11.278 1.00 25.05 O
ATOM 6 C5' G A 61 4.154 51.757 9.859 1.00 25.74 C
ATOM 7 C4' G A 61 2.939 52.491 9.339 1.00 27.50 C
ATOM 8 O4' G A 61 1.723 51.773 9.677 1.00 25.87 O
ATOM 9 C3' G A 61 2.704 53.887 9.892 1.00 25.59 C
ATOM 10 O3' G A 61 3.516 54.858 9.252 1.00 27.59 O
ATOM 11 C2' G A 61 1.218 54.077 9.626 1.00 30.35 C
ATOM 12 O2' G A 61 1.027 54.346 8.244 1.00 32.71 O
ATOM 13 C1' G A 61 0.665 52.677 9.908 1.00 27.10 C
ATOM 14 N9 G A 61 0.201 52.508 11.301 1.00 28.16 N
ATOM 15 C8 G A 61 0.855 51.814 12.293 1.00 27.97 C
ATOM 16 N7 G A 61 0.214 51.827 13.429 1.00 31.38 N
ATOM 17 C5 G A 61 -0.927 52.580 13.180 1.00 29.96 C
ATOM 18 C6 G A 61 -2.000 52.941 14.044 1.00 31.49 C
ATOM 19 O6 G A 61 -2.139 52.657 15.242 1.00 34.70 O
ATOM 20 N1 G A 61 -2.958 53.711 13.392 1.00 29.73 N
ATOM 21 C2 G A 61 -2.884 54.089 12.074 1.00 34.36 C
ATOM 22 N2 G A 61 -3.898 54.834 11.595 1.00 32.89 N
ATOM 23 N3 G A 61 -1.887 53.753 11.267 1.00 32.40 N
ATOM 24 C4 G A 61 -0.951 53.000 11.875 1.00 28.75 C
ATOM 25 P C A 62 4.166 56.101 10.048 1.00 28.79 P
ATOM 26 OP1 C A 62 4.996 56.836 9.060 1.00 32.83 O
ATOM 27 OP2 C A 62 4.782 55.582 11.290 1.00 25.51 O
ATOM 28 O5' C A 62 2.903 56.977 10.454 1.00 31.56 O
TER
ATOM 1 O3' G B 61 3.516 54.858 9.252 1.00 27.59 O
ATOM 2 P C B 62 4.166 56.101 10.048 1.00 28.79 P
ATOM 3 OP1 C B 62 4.996 56.836 9.060 1.00 32.83 O
ATOM 4 OP2 C B 62 4.782 55.582 11.290 1.00 25.51 O
ATOM 5 O5' C B 62 2.903 56.977 10.454 1.00 31.56 O
ATOM 6 C5' C B 62 2.023 57.571 9.511 1.00 29.33 C
ATOM 7 C4' C B 62 0.772 58.039 10.207 1.00 30.83 C
ATOM 8 O4' C B 62 0.031 56.890 10.710 1.00 30.67 O
ATOM 9 C3' C B 62 0.990 58.890 11.452 1.00 28.78 C
ATOM 10 O3' C B 62 1.309 60.242 11.170 1.00 28.36 O
ATOM 11 C2' C B 62 -0.342 58.720 12.161 1.00 30.85 C
ATOM 12 O2' C B 62 -1.330 59.468 11.472 1.00 36.06 O
ATOM 13 C1' C B 62 -0.611 57.236 11.918 1.00 29.82 C
ATOM 14 N1 C B 62 -0.081 56.422 13.035 1.00 32.21 N
ATOM 15 C2 C B 62 -0.857 56.336 14.195 1.00 30.22 C
ATOM 16 O2 C B 62 -1.935 56.941 14.226 1.00 34.79 O
ATOM 17 N3 C B 62 -0.413 55.617 15.251 1.00 30.09 N
ATOM 18 C4 C B 62 0.746 54.979 15.190 1.00 30.10 C
ATOM 19 N4 C B 62 1.121 54.273 16.270 1.00 32.14 N
ATOM 20 C5 C B 62 1.563 55.045 14.021 1.00 29.04 C
ATOM 21 C6 C B 62 1.118 55.770 12.978 1.00 26.27 C
ATOM 22 P C B 63 2.492 60.993 11.981 1.00 32.71 P
ATOM 23 OP1 C B 63 2.708 62.242 11.220 1.00 32.76 O
ATOM 24 OP2 C B 63 3.647 60.080 12.154 1.00 33.99 O
ATOM 25 O5' C B 63 1.842 61.243 13.421 1.00 29.34 O
TER
ATOM 2 P G A 61 5.324 50.927 12.077 1.00 27.31 P
ATOM 3 OP1 G A 61 6.678 51.284 11.587 1.00 27.95 O
ATOM 4 OP2 G A 61 5.008 50.975 13.519 1.00 27.79 O
ATOM 5 O5' G A 61 4.178 51.707 11.278 1.00 25.05 O
ATOM 6 C5' G A 61 4.154 51.757 9.859 1.00 25.74 C
ATOM 7 C4' G A 61 2.939 52.491 9.339 1.00 27.50 C
ATOM 8 O4' G A 61 1.723 51.773 9.677 1.00 25.87 O
ATOM 9 C3' G A 61 2.704 53.887 9.892 1.00 25.59 C
ATOM 10 O3' G A 61 3.516 54.858 9.252 1.00 27.59 O
ATOM 11 C2' G A 61 1.218 54.077 9.626 1.00 30.35 C
ATOM 12 O2' G A 61 1.027 54.346 8.244 1.00 32.71 O
ATOM 13 C1' G A 61 0.665 52.677 9.908 1.00 27.10 C
ATOM 14 N9 G A 61 0.201 52.508 11.301 1.00 28.16 N
ATOM 15 C8 G A 61 0.855 51.814 12.293 1.00 27.97 C
ATOM 16 N7 G A 61 0.214 51.827 13.429 1.00 31.38 N
ATOM 17 C5 G A 61 -0.927 52.580 13.180 1.00 29.96 C
ATOM 18 C6 G A 61 -2.000 52.941 14.044 1.00 31.49 C
ATOM 19 O6 G A 61 -2.139 52.657 15.242 1.00 34.70 O
ATOM 20 N1 G A 61 -2.958 53.711 13.392 1.00 29.73 N
ATOM 21 C2 G A 61 -2.884 54.089 12.074 1.00 34.36 C
ATOM 22 N2 G A 61 -3.898 54.834 11.595 1.00 32.89 N
ATOM 23 N3 G A 61 -1.887 53.753 11.267 1.00 32.40 N
ATOM 24 C4 G A 61 -0.951 53.000 11.875 1.00 28.75 C
ATOM 25 P C A 62 4.166 56.101 10.048 1.00 28.79 P
ATOM 26 OP1 C A 62 4.996 56.836 9.060 1.00 32.83 O
ATOM 27 OP2 C A 62 4.782 55.582 11.290 1.00 25.51 O
ATOM 28 O5' C A 62 2.903 56.977 10.454 1.00 31.56 O
TER
ATOM 1 O3' G B 61 3.516 54.858 9.252 1.00 27.59 O
ATOM 2 P C B 62 4.166 56.101 10.048 1.00 28.79 P
ATOM 3 OP1 C B 62 4.996 56.836 9.060 1.00 32.83 O
ATOM 4 OP2 C B 62 4.782 55.582 11.290 1.00 25.51 O
ATOM 5 O5' C B 62 2.903 56.977 10.454 1.00 31.56 O
ATOM 6 C5' C B 62 2.023 57.571 9.511 1.00 29.33 C
ATOM 7 C4' C B 62 0.772 58.039 10.207 1.00 30.83 C
ATOM 8 O4' C B 62 0.031 56.890 10.710 1.00 30.67 O
ATOM 9 C3' C B 62 0.990 58.890 11.452 1.00 28.78 C
ATOM 10 O3' C B 62 1.309 60.242 11.170 1.00 28.36 O
ATOM 11 C2' C B 62 -0.342 58.720 12.161 1.00 30.85 C
ATOM 12 O2' C B 62 -1.330 59.468 11.472 1.00 36.06 O
ATOM 13 C1' C B 62 -0.611 57.236 11.918 1.00 29.82 C
ATOM 14 N1 C B 62 -0.081 56.422 13.035 1.00 32.21 N
ATOM 15 C2 C B 62 -0.857 56.336 14.195 1.00 30.22 C
ATOM 16 O2 C B 62 -1.935 56.941 14.226 1.00 34.79 O
ATOM 17 N3 C B 62 -0.413 55.617 15.251 1.00 30.09 N
ATOM 18 C4 C B 62 0.746 54.979 15.190 1.00 30.10 C
ATOM 19 N4 C B 62 1.121 54.273 16.270 1.00 32.14 N
ATOM 20 C5 C B 62 1.563 55.045 14.021 1.00 29.04 C
ATOM 21 C6 C B 62 1.118 55.770 12.978 1.00 26.27 C
ATOM 22 P C B 63 2.492 60.993 11.981 1.00 32.71 P
ATOM 23 OP1 C B 63 2.708 62.242 11.220 1.00 32.76 O
ATOM 24 OP2 C B 63 3.647 60.080 12.154 1.00 33.99 O
ATOM 25 O5' C B 63 1.842 61.243 13.421 1.00 29.34 O
TER
Atoms:
OP1: (6.678,51.284,11.587)
OP2: (5.008,50.975,13.519)
C3': (2.704,53.887,9.892)
C1': (0.665,52.677,9.908)
C5': (4.154,51.757,9.859)
O6: (-2.139,52.657,15.242)
O4': (1.723,51.773,9.677)
C8: (0.855,51.814,12.293)
C2: (-2.884,54.089,12.074)
C6: (-2.000,52.941,14.044)
C5: (-0.927,52.580,13.180)
C4: (-0.951,53.000,11.875)
P: (5.324,50.927,12.077)
C4': (2.939,52.491,9.339)
C2': (1.218,54.077,9.626)
O2': (1.027,54.346,8.244)
N1: (-2.958,53.711,13.392)
N2: (-3.898,54.834,11.595)
N3: (-1.887,53.753,11.267)
N7: (0.214,51.827,13.429)
N9: (0.201,52.508,11.301)
O5': (4.178,51.707,11.278)
O3': (3.516,54.858,9.252)
OP2: (5.008,50.975,13.519)
C3': (2.704,53.887,9.892)
C1': (0.665,52.677,9.908)
C5': (4.154,51.757,9.859)
O6: (-2.139,52.657,15.242)
O4': (1.723,51.773,9.677)
C8: (0.855,51.814,12.293)
C2: (-2.884,54.089,12.074)
C6: (-2.000,52.941,14.044)
C5: (-0.927,52.580,13.180)
C4: (-0.951,53.000,11.875)
P: (5.324,50.927,12.077)
C4': (2.939,52.491,9.339)
C2': (1.218,54.077,9.626)
O2': (1.027,54.346,8.244)
N1: (-2.958,53.711,13.392)
N2: (-3.898,54.834,11.595)
N3: (-1.887,53.753,11.267)
N7: (0.214,51.827,13.429)
N9: (0.201,52.508,11.301)
O5': (4.178,51.707,11.278)
O3': (3.516,54.858,9.252)
C2: (-0.857,56.336,14.195)
OP1: (4.996,56.836,9.060)
OP2: (4.782,55.582,11.290)
C4: (0.746,54.979,15.190)
O5': (2.903,56.977,10.454)
C3': (0.990,58.890,11.452)
C1': (-0.611,57.236,11.918)
O4': (0.031,56.890,10.710)
C5': (2.023,57.571,9.511)
P: (4.166,56.101,10.048)
O2: (-1.935,56.941,14.226)
C4': (0.772,58.039,10.207)
C2': (-0.342,58.720,12.161)
O2': (-1.330,59.468,11.472)
N1: (-0.081,56.422,13.035)
N3: (-0.413,55.617,15.251)
N4: (1.121,54.273,16.270)
C6: (1.118,55.770,12.978)
C5: (1.563,55.045,14.021)
O3': (1.309,60.242,11.170)
OP1: (4.996,56.836,9.060)
OP2: (4.782,55.582,11.290)
C4: (0.746,54.979,15.190)
O5': (2.903,56.977,10.454)
C3': (0.990,58.890,11.452)
C1': (-0.611,57.236,11.918)
O4': (0.031,56.890,10.710)
C5': (2.023,57.571,9.511)
P: (4.166,56.101,10.048)
O2: (-1.935,56.941,14.226)
C4': (0.772,58.039,10.207)
C2': (-0.342,58.720,12.161)
O2': (-1.330,59.468,11.472)
N1: (-0.081,56.422,13.035)
N3: (-0.413,55.617,15.251)
N4: (1.121,54.273,16.270)
C6: (1.118,55.770,12.978)
C5: (1.563,55.045,14.021)
O3': (1.309,60.242,11.170)
Image (generated by PyMOL):