Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XNZ:A59:A34
Extra
PDB:
ATOM 1 O3' U A 58 9.520 2.858 3.350 1.00 29.09 O
ATOM 2 P U A 59 8.026 3.260 3.766 1.00 29.25 P
ATOM 3 OP1 U A 59 7.179 2.834 2.623 1.00 30.60 O
ATOM 4 OP2 U A 59 7.978 4.671 4.210 1.00 28.68 O
ATOM 5 O5' U A 59 7.717 2.337 5.039 1.00 29.52 O
ATOM 6 C5' U A 59 7.765 0.911 4.966 1.00 28.63 C
ATOM 7 C4' U A 59 7.675 0.277 6.343 1.00 28.23 C
ATOM 8 O4' U A 59 8.826 0.624 7.165 1.00 28.92 O
ATOM 9 C3' U A 59 6.499 0.746 7.173 1.00 28.86 C
ATOM 10 O3' U A 59 5.312 0.087 6.736 1.00 30.44 O
ATOM 11 C2' U A 59 6.954 0.348 8.573 1.00 27.37 C
ATOM 12 O2' U A 59 6.857 -1.038 8.818 1.00 28.30 O
ATOM 13 C1' U A 59 8.423 0.765 8.519 1.00 27.46 C
ATOM 14 N1 U A 59 8.636 2.179 8.996 1.00 25.90 N
ATOM 15 C2 U A 59 8.688 2.420 10.359 1.00 24.63 C
ATOM 16 O2 U A 59 8.569 1.545 11.203 1.00 26.90 O
ATOM 17 N3 U A 59 8.882 3.734 10.704 1.00 25.68 N
ATOM 18 C4 U A 59 8.999 4.808 9.840 1.00 23.98 C
ATOM 19 O4 U A 59 9.158 5.927 10.297 1.00 25.10 O
ATOM 20 C5 U A 59 8.924 4.484 8.436 1.00 24.21 C
ATOM 21 C6 U A 59 8.753 3.211 8.076 1.00 24.05 C
ATOM 22 P A A 60 3.894 0.813 6.889 1.00 30.79 P
ATOM 23 OP1 A A 60 2.946 -0.024 6.117 1.00 31.52 O
ATOM 24 OP2 A A 60 4.015 2.258 6.609 1.00 29.22 O
ATOM 25 O5' A A 60 3.603 0.674 8.451 1.00 31.10 O
TER
ATOM 1 O3' U B 33 5.007 -5.035 16.716 1.00 38.50 O
ATOM 2 P C B 34 6.095 -6.145 16.405 1.00 40.31 P
ATOM 3 OP1 C B 34 5.823 -7.306 17.288 1.00 41.68 O
ATOM 4 OP2 C B 34 7.425 -5.486 16.399 1.00 41.18 O
ATOM 5 O5' C B 34 5.782 -6.524 14.893 1.00 40.31 O
ATOM 6 C5' C B 34 4.630 -7.270 14.538 1.00 39.00 C
ATOM 7 C4' C B 34 4.374 -7.040 13.067 1.00 38.03 C
ATOM 8 O4' C B 34 3.910 -5.673 12.916 1.00 37.70 O
ATOM 9 C3' C B 34 5.619 -7.119 12.196 1.00 37.42 C
ATOM 10 O3' C B 34 5.892 -8.457 11.776 1.00 37.91 O
ATOM 11 C2' C B 34 5.233 -6.215 11.033 1.00 36.72 C
ATOM 12 O2' C B 34 4.410 -6.866 10.089 1.00 36.77 O
ATOM 13 C1' C B 34 4.441 -5.111 11.732 1.00 36.73 C
ATOM 14 N1 C B 34 5.225 -3.865 12.056 1.00 35.11 N
ATOM 15 C2 C B 34 5.748 -3.082 11.013 1.00 34.54 C
ATOM 16 O2 C B 34 5.562 -3.437 9.844 1.00 35.60 O
ATOM 17 N3 C B 34 6.451 -1.955 11.313 1.00 33.48 N
ATOM 18 C4 C B 34 6.634 -1.583 12.583 1.00 33.29 C
ATOM 19 N4 C B 34 7.321 -0.458 12.826 1.00 31.81 N
ATOM 20 C5 C B 34 6.101 -2.356 13.662 1.00 34.29 C
ATOM 21 C6 C B 34 5.416 -3.472 13.352 1.00 35.07 C
ATOM 22 P U B 35 7.362 -9.086 11.936 1.00 39.27 P
ATOM 23 OP1 U B 35 7.373 -10.477 11.432 1.00 38.45 O
ATOM 24 OP2 U B 35 7.816 -8.783 13.312 1.00 38.17 O
ATOM 25 O5' U B 35 8.234 -8.203 10.928 1.00 37.21 O
TER
ATOM 2 P U A 59 8.026 3.260 3.766 1.00 29.25 P
ATOM 3 OP1 U A 59 7.179 2.834 2.623 1.00 30.60 O
ATOM 4 OP2 U A 59 7.978 4.671 4.210 1.00 28.68 O
ATOM 5 O5' U A 59 7.717 2.337 5.039 1.00 29.52 O
ATOM 6 C5' U A 59 7.765 0.911 4.966 1.00 28.63 C
ATOM 7 C4' U A 59 7.675 0.277 6.343 1.00 28.23 C
ATOM 8 O4' U A 59 8.826 0.624 7.165 1.00 28.92 O
ATOM 9 C3' U A 59 6.499 0.746 7.173 1.00 28.86 C
ATOM 10 O3' U A 59 5.312 0.087 6.736 1.00 30.44 O
ATOM 11 C2' U A 59 6.954 0.348 8.573 1.00 27.37 C
ATOM 12 O2' U A 59 6.857 -1.038 8.818 1.00 28.30 O
ATOM 13 C1' U A 59 8.423 0.765 8.519 1.00 27.46 C
ATOM 14 N1 U A 59 8.636 2.179 8.996 1.00 25.90 N
ATOM 15 C2 U A 59 8.688 2.420 10.359 1.00 24.63 C
ATOM 16 O2 U A 59 8.569 1.545 11.203 1.00 26.90 O
ATOM 17 N3 U A 59 8.882 3.734 10.704 1.00 25.68 N
ATOM 18 C4 U A 59 8.999 4.808 9.840 1.00 23.98 C
ATOM 19 O4 U A 59 9.158 5.927 10.297 1.00 25.10 O
ATOM 20 C5 U A 59 8.924 4.484 8.436 1.00 24.21 C
ATOM 21 C6 U A 59 8.753 3.211 8.076 1.00 24.05 C
ATOM 22 P A A 60 3.894 0.813 6.889 1.00 30.79 P
ATOM 23 OP1 A A 60 2.946 -0.024 6.117 1.00 31.52 O
ATOM 24 OP2 A A 60 4.015 2.258 6.609 1.00 29.22 O
ATOM 25 O5' A A 60 3.603 0.674 8.451 1.00 31.10 O
TER
ATOM 1 O3' U B 33 5.007 -5.035 16.716 1.00 38.50 O
ATOM 2 P C B 34 6.095 -6.145 16.405 1.00 40.31 P
ATOM 3 OP1 C B 34 5.823 -7.306 17.288 1.00 41.68 O
ATOM 4 OP2 C B 34 7.425 -5.486 16.399 1.00 41.18 O
ATOM 5 O5' C B 34 5.782 -6.524 14.893 1.00 40.31 O
ATOM 6 C5' C B 34 4.630 -7.270 14.538 1.00 39.00 C
ATOM 7 C4' C B 34 4.374 -7.040 13.067 1.00 38.03 C
ATOM 8 O4' C B 34 3.910 -5.673 12.916 1.00 37.70 O
ATOM 9 C3' C B 34 5.619 -7.119 12.196 1.00 37.42 C
ATOM 10 O3' C B 34 5.892 -8.457 11.776 1.00 37.91 O
ATOM 11 C2' C B 34 5.233 -6.215 11.033 1.00 36.72 C
ATOM 12 O2' C B 34 4.410 -6.866 10.089 1.00 36.77 O
ATOM 13 C1' C B 34 4.441 -5.111 11.732 1.00 36.73 C
ATOM 14 N1 C B 34 5.225 -3.865 12.056 1.00 35.11 N
ATOM 15 C2 C B 34 5.748 -3.082 11.013 1.00 34.54 C
ATOM 16 O2 C B 34 5.562 -3.437 9.844 1.00 35.60 O
ATOM 17 N3 C B 34 6.451 -1.955 11.313 1.00 33.48 N
ATOM 18 C4 C B 34 6.634 -1.583 12.583 1.00 33.29 C
ATOM 19 N4 C B 34 7.321 -0.458 12.826 1.00 31.81 N
ATOM 20 C5 C B 34 6.101 -2.356 13.662 1.00 34.29 C
ATOM 21 C6 C B 34 5.416 -3.472 13.352 1.00 35.07 C
ATOM 22 P U B 35 7.362 -9.086 11.936 1.00 39.27 P
ATOM 23 OP1 U B 35 7.373 -10.477 11.432 1.00 38.45 O
ATOM 24 OP2 U B 35 7.816 -8.783 13.312 1.00 38.17 O
ATOM 25 O5' U B 35 8.234 -8.203 10.928 1.00 37.21 O
TER
Atoms:
C4: (8.999,4.808,9.840)
N3: (8.882,3.734,10.704)
OP1: (7.179,2.834,2.623)
OP2: (7.978,4.671,4.210)
C2: (8.688,2.420,10.359)
C1': (8.423,0.765,8.519)
C3': (6.499,0.746,7.173)
O5': (7.717,2.337,5.039)
O4': (8.826,0.624,7.165)
C5': (7.765,0.911,4.966)
P: (8.026,3.260,3.766)
C4': (7.675,0.277,6.343)
C2': (6.954,0.348,8.573)
O2': (6.857,-1.038,8.818)
N1: (8.636,2.179,8.996)
O4: (9.158,5.927,10.297)
O2: (8.569,1.545,11.203)
C6: (8.753,3.211,8.076)
C5: (8.924,4.484,8.436)
O3': (5.312,0.087,6.736)
N3: (8.882,3.734,10.704)
OP1: (7.179,2.834,2.623)
OP2: (7.978,4.671,4.210)
C2: (8.688,2.420,10.359)
C1': (8.423,0.765,8.519)
C3': (6.499,0.746,7.173)
O5': (7.717,2.337,5.039)
O4': (8.826,0.624,7.165)
C5': (7.765,0.911,4.966)
P: (8.026,3.260,3.766)
C4': (7.675,0.277,6.343)
C2': (6.954,0.348,8.573)
O2': (6.857,-1.038,8.818)
N1: (8.636,2.179,8.996)
O4: (9.158,5.927,10.297)
O2: (8.569,1.545,11.203)
C6: (8.753,3.211,8.076)
C5: (8.924,4.484,8.436)
O3': (5.312,0.087,6.736)
C2: (5.748,-3.082,11.013)
OP1: (5.823,-7.306,17.288)
OP2: (7.425,-5.486,16.399)
C4: (6.634,-1.583,12.583)
O5': (5.782,-6.524,14.893)
C3': (5.619,-7.119,12.196)
C1': (4.441,-5.111,11.732)
O4': (3.910,-5.673,12.916)
C5': (4.630,-7.270,14.538)
P: (6.095,-6.145,16.405)
O2: (5.562,-3.437,9.844)
C4': (4.374,-7.040,13.067)
C2': (5.233,-6.215,11.033)
O2': (4.410,-6.866,10.089)
N1: (5.225,-3.865,12.056)
N3: (6.451,-1.955,11.313)
N4: (7.321,-0.458,12.826)
C6: (5.416,-3.472,13.352)
C5: (6.101,-2.356,13.662)
O3': (5.892,-8.457,11.776)
OP1: (5.823,-7.306,17.288)
OP2: (7.425,-5.486,16.399)
C4: (6.634,-1.583,12.583)
O5': (5.782,-6.524,14.893)
C3': (5.619,-7.119,12.196)
C1': (4.441,-5.111,11.732)
O4': (3.910,-5.673,12.916)
C5': (4.630,-7.270,14.538)
P: (6.095,-6.145,16.405)
O2: (5.562,-3.437,9.844)
C4': (4.374,-7.040,13.067)
C2': (5.233,-6.215,11.033)
O2': (4.410,-6.866,10.089)
N1: (5.225,-3.865,12.056)
N3: (6.451,-1.955,11.313)
N4: (7.321,-0.458,12.826)
C6: (5.416,-3.472,13.352)
C5: (6.101,-2.356,13.662)
O3': (5.892,-8.457,11.776)
Image (generated by PyMOL):