Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GAO:A60:A35
Extra
PDB:
ATOM 1 O3' C A 59 9.383 10.262 17.849 1.00 26.98 O
ATOM 2 P U A 60 7.845 9.959 17.507 1.00 27.89 P
ATOM 3 OP1 U A 60 7.022 10.508 18.616 1.00 27.16 O
ATOM 4 OP2 U A 60 7.731 8.526 17.147 1.00 26.83 O
ATOM 5 O5' U A 60 7.565 10.828 16.203 1.00 26.37 O
ATOM 6 C5' U A 60 7.609 12.246 16.262 1.00 26.37 C
ATOM 7 C4' U A 60 7.424 12.842 14.887 1.00 26.01 C
ATOM 8 O4' U A 60 8.555 12.479 14.047 1.00 26.89 O
ATOM 9 C3' U A 60 6.222 12.325 14.116 1.00 26.48 C
ATOM 10 O3' U A 60 5.015 12.973 14.497 1.00 27.84 O
ATOM 11 C2' U A 60 6.622 12.612 12.676 1.00 25.57 C
ATOM 12 O2' U A 60 6.458 13.971 12.331 1.00 25.83 O
ATOM 13 C1' U A 60 8.115 12.287 12.711 1.00 24.93 C
ATOM 14 N1 U A 60 8.375 10.895 12.319 1.00 22.91 N
ATOM 15 C2 U A 60 8.448 10.622 10.969 1.00 21.02 C
ATOM 16 O2 U A 60 8.323 11.482 10.114 1.00 23.49 O
ATOM 17 N3 U A 60 8.669 9.308 10.653 1.00 19.99 N
ATOM 18 C4 U A 60 8.823 8.264 11.530 1.00 18.44 C
ATOM 19 O4 U A 60 9.034 7.139 11.089 1.00 19.02 O
ATOM 20 C5 U A 60 8.740 8.625 12.911 1.00 20.48 C
ATOM 21 C6 U A 60 8.526 9.899 13.250 1.00 20.98 C
ATOM 22 P A A 61 3.619 12.190 14.353 1.00 27.97 P
ATOM 23 OP1 A A 61 2.580 13.005 15.031 1.00 30.70 O
ATOM 24 OP2 A A 61 3.829 10.781 14.759 1.00 27.58 O
ATOM 25 O5' A A 61 3.325 12.219 12.787 1.00 28.05 O
TER
ATOM 1 O3' U B 34 4.734 18.070 4.169 1.00 31.23 O
ATOM 2 P C B 35 6.044 18.965 4.429 1.00 33.97 P
ATOM 3 OP1 C B 35 5.981 20.164 3.557 1.00 32.77 O
ATOM 4 OP2 C B 35 7.256 18.107 4.405 1.00 32.39 O
ATOM 5 O5' C B 35 5.835 19.450 5.930 1.00 31.43 O
ATOM 6 C5' C B 35 4.695 20.224 6.293 1.00 30.36 C
ATOM 7 C4' C B 35 4.357 19.995 7.744 1.00 29.79 C
ATOM 8 O4' C B 35 3.828 18.655 7.920 1.00 29.52 O
ATOM 9 C3' C B 35 5.545 20.062 8.688 1.00 30.35 C
ATOM 10 O3' C B 35 5.813 21.407 9.058 1.00 31.33 O
ATOM 11 C2' C B 35 5.067 19.229 9.870 1.00 30.21 C
ATOM 12 O2' C B 35 4.220 19.948 10.743 1.00 31.36 O
ATOM 13 C1' C B 35 4.262 18.134 9.166 1.00 29.48 C
ATOM 14 N1 C B 35 5.025 16.905 8.907 1.00 29.00 N
ATOM 15 C2 C B 35 5.503 16.164 9.992 1.00 28.67 C
ATOM 16 O2 C B 35 5.290 16.577 11.142 1.00 28.77 O
ATOM 17 N3 C B 35 6.183 15.017 9.761 1.00 28.84 N
ATOM 18 C4 C B 35 6.390 14.605 8.508 1.00 28.40 C
ATOM 19 N4 C B 35 7.048 13.458 8.328 1.00 26.52 N
ATOM 20 C5 C B 35 5.926 15.349 7.384 1.00 29.23 C
ATOM 21 C6 C B 35 5.255 16.483 7.627 1.00 29.70 C
ATOM 22 P U B 36 7.308 21.981 8.937 1.00 32.34 P
ATOM 23 OP1 U B 36 7.322 23.371 9.456 1.00 33.02 O
ATOM 24 OP2 U B 36 7.785 21.710 7.556 1.00 33.41 O
ATOM 25 O5' U B 36 8.150 21.063 9.931 1.00 31.61 O
TER
ATOM 2 P U A 60 7.845 9.959 17.507 1.00 27.89 P
ATOM 3 OP1 U A 60 7.022 10.508 18.616 1.00 27.16 O
ATOM 4 OP2 U A 60 7.731 8.526 17.147 1.00 26.83 O
ATOM 5 O5' U A 60 7.565 10.828 16.203 1.00 26.37 O
ATOM 6 C5' U A 60 7.609 12.246 16.262 1.00 26.37 C
ATOM 7 C4' U A 60 7.424 12.842 14.887 1.00 26.01 C
ATOM 8 O4' U A 60 8.555 12.479 14.047 1.00 26.89 O
ATOM 9 C3' U A 60 6.222 12.325 14.116 1.00 26.48 C
ATOM 10 O3' U A 60 5.015 12.973 14.497 1.00 27.84 O
ATOM 11 C2' U A 60 6.622 12.612 12.676 1.00 25.57 C
ATOM 12 O2' U A 60 6.458 13.971 12.331 1.00 25.83 O
ATOM 13 C1' U A 60 8.115 12.287 12.711 1.00 24.93 C
ATOM 14 N1 U A 60 8.375 10.895 12.319 1.00 22.91 N
ATOM 15 C2 U A 60 8.448 10.622 10.969 1.00 21.02 C
ATOM 16 O2 U A 60 8.323 11.482 10.114 1.00 23.49 O
ATOM 17 N3 U A 60 8.669 9.308 10.653 1.00 19.99 N
ATOM 18 C4 U A 60 8.823 8.264 11.530 1.00 18.44 C
ATOM 19 O4 U A 60 9.034 7.139 11.089 1.00 19.02 O
ATOM 20 C5 U A 60 8.740 8.625 12.911 1.00 20.48 C
ATOM 21 C6 U A 60 8.526 9.899 13.250 1.00 20.98 C
ATOM 22 P A A 61 3.619 12.190 14.353 1.00 27.97 P
ATOM 23 OP1 A A 61 2.580 13.005 15.031 1.00 30.70 O
ATOM 24 OP2 A A 61 3.829 10.781 14.759 1.00 27.58 O
ATOM 25 O5' A A 61 3.325 12.219 12.787 1.00 28.05 O
TER
ATOM 1 O3' U B 34 4.734 18.070 4.169 1.00 31.23 O
ATOM 2 P C B 35 6.044 18.965 4.429 1.00 33.97 P
ATOM 3 OP1 C B 35 5.981 20.164 3.557 1.00 32.77 O
ATOM 4 OP2 C B 35 7.256 18.107 4.405 1.00 32.39 O
ATOM 5 O5' C B 35 5.835 19.450 5.930 1.00 31.43 O
ATOM 6 C5' C B 35 4.695 20.224 6.293 1.00 30.36 C
ATOM 7 C4' C B 35 4.357 19.995 7.744 1.00 29.79 C
ATOM 8 O4' C B 35 3.828 18.655 7.920 1.00 29.52 O
ATOM 9 C3' C B 35 5.545 20.062 8.688 1.00 30.35 C
ATOM 10 O3' C B 35 5.813 21.407 9.058 1.00 31.33 O
ATOM 11 C2' C B 35 5.067 19.229 9.870 1.00 30.21 C
ATOM 12 O2' C B 35 4.220 19.948 10.743 1.00 31.36 O
ATOM 13 C1' C B 35 4.262 18.134 9.166 1.00 29.48 C
ATOM 14 N1 C B 35 5.025 16.905 8.907 1.00 29.00 N
ATOM 15 C2 C B 35 5.503 16.164 9.992 1.00 28.67 C
ATOM 16 O2 C B 35 5.290 16.577 11.142 1.00 28.77 O
ATOM 17 N3 C B 35 6.183 15.017 9.761 1.00 28.84 N
ATOM 18 C4 C B 35 6.390 14.605 8.508 1.00 28.40 C
ATOM 19 N4 C B 35 7.048 13.458 8.328 1.00 26.52 N
ATOM 20 C5 C B 35 5.926 15.349 7.384 1.00 29.23 C
ATOM 21 C6 C B 35 5.255 16.483 7.627 1.00 29.70 C
ATOM 22 P U B 36 7.308 21.981 8.937 1.00 32.34 P
ATOM 23 OP1 U B 36 7.322 23.371 9.456 1.00 33.02 O
ATOM 24 OP2 U B 36 7.785 21.710 7.556 1.00 33.41 O
ATOM 25 O5' U B 36 8.150 21.063 9.931 1.00 31.61 O
TER
Atoms:
C4: (8.823,8.264,11.530)
N3: (8.669,9.308,10.653)
OP1: (7.022,10.508,18.616)
OP2: (7.731,8.526,17.147)
C2: (8.448,10.622,10.969)
C1': (8.115,12.287,12.711)
C3': (6.222,12.325,14.116)
O5': (7.565,10.828,16.203)
O4': (8.555,12.479,14.047)
C5': (7.609,12.246,16.262)
P: (7.845,9.959,17.507)
C4': (7.424,12.842,14.887)
C2': (6.622,12.612,12.676)
O2': (6.458,13.971,12.331)
N1: (8.375,10.895,12.319)
O4: (9.034,7.139,11.089)
O2: (8.323,11.482,10.114)
C6: (8.526,9.899,13.250)
C5: (8.740,8.625,12.911)
O3': (5.015,12.973,14.497)
N3: (8.669,9.308,10.653)
OP1: (7.022,10.508,18.616)
OP2: (7.731,8.526,17.147)
C2: (8.448,10.622,10.969)
C1': (8.115,12.287,12.711)
C3': (6.222,12.325,14.116)
O5': (7.565,10.828,16.203)
O4': (8.555,12.479,14.047)
C5': (7.609,12.246,16.262)
P: (7.845,9.959,17.507)
C4': (7.424,12.842,14.887)
C2': (6.622,12.612,12.676)
O2': (6.458,13.971,12.331)
N1: (8.375,10.895,12.319)
O4: (9.034,7.139,11.089)
O2: (8.323,11.482,10.114)
C6: (8.526,9.899,13.250)
C5: (8.740,8.625,12.911)
O3': (5.015,12.973,14.497)
C2: (5.503,16.164,9.992)
OP1: (5.981,20.164,3.557)
OP2: (7.256,18.107,4.405)
C4: (6.390,14.605,8.508)
O5': (5.835,19.450,5.930)
C3': (5.545,20.062,8.688)
C1': (4.262,18.134,9.166)
O4': (3.828,18.655,7.920)
C5': (4.695,20.224,6.293)
P: (6.044,18.965,4.429)
O2: (5.290,16.577,11.142)
C4': (4.357,19.995,7.744)
C2': (5.067,19.229,9.870)
O2': (4.220,19.948,10.743)
N1: (5.025,16.905,8.907)
N3: (6.183,15.017,9.761)
N4: (7.048,13.458,8.328)
C6: (5.255,16.483,7.627)
C5: (5.926,15.349,7.384)
O3': (5.813,21.407,9.058)
OP1: (5.981,20.164,3.557)
OP2: (7.256,18.107,4.405)
C4: (6.390,14.605,8.508)
O5': (5.835,19.450,5.930)
C3': (5.545,20.062,8.688)
C1': (4.262,18.134,9.166)
O4': (3.828,18.655,7.920)
C5': (4.695,20.224,6.293)
P: (6.044,18.965,4.429)
O2: (5.290,16.577,11.142)
C4': (4.357,19.995,7.744)
C2': (5.067,19.229,9.870)
O2': (4.220,19.948,10.743)
N1: (5.025,16.905,8.907)
N3: (6.183,15.017,9.761)
N4: (7.048,13.458,8.328)
C6: (5.255,16.483,7.627)
C5: (5.926,15.349,7.384)
O3': (5.813,21.407,9.058)
Image (generated by PyMOL):