Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GER:A60:A35
Extra
PDB:
ATOM 1 O3' C A 59 9.596 10.236 17.734 1.00 29.59 O
ATOM 2 P U A 60 8.045 9.996 17.387 1.00 29.84 P
ATOM 3 OP1 U A 60 7.252 10.623 18.478 1.00 30.61 O
ATOM 4 OP2 U A 60 7.848 8.561 17.071 1.00 29.35 O
ATOM 5 O5' U A 60 7.816 10.836 16.052 1.00 28.96 O
ATOM 6 C5' U A 60 7.945 12.251 16.058 1.00 27.85 C
ATOM 7 C4' U A 60 7.705 12.817 14.677 1.00 27.55 C
ATOM 8 O4' U A 60 8.813 12.445 13.809 1.00 26.73 O
ATOM 9 C3' U A 60 6.479 12.292 13.945 1.00 27.87 C
ATOM 10 O3' U A 60 5.294 12.980 14.329 1.00 29.47 O
ATOM 11 C2' U A 60 6.843 12.559 12.491 1.00 26.35 C
ATOM 12 O2' U A 60 6.674 13.914 12.127 1.00 27.00 O
ATOM 13 C1' U A 60 8.334 12.227 12.490 1.00 25.68 C
ATOM 14 N1 U A 60 8.577 10.826 12.118 1.00 23.52 N
ATOM 15 C2 U A 60 8.677 10.538 10.772 1.00 22.38 C
ATOM 16 O2 U A 60 8.585 11.392 9.908 1.00 23.40 O
ATOM 17 N3 U A 60 8.884 9.215 10.476 1.00 21.89 N
ATOM 18 C4 U A 60 8.997 8.175 11.369 1.00 21.23 C
ATOM 19 O4 U A 60 9.178 7.029 10.948 1.00 22.42 O
ATOM 20 C5 U A 60 8.888 8.555 12.743 1.00 21.59 C
ATOM 21 C6 U A 60 8.689 9.838 13.063 1.00 22.09 C
ATOM 22 P A A 61 3.878 12.221 14.259 1.00 30.19 P
ATOM 23 OP1 A A 61 2.885 13.072 14.963 1.00 29.89 O
ATOM 24 OP2 A A 61 4.066 10.812 14.682 1.00 29.67 O
ATOM 25 O5' A A 61 3.525 12.210 12.707 1.00 30.07 O
TER
ATOM 1 O3' U B 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 2 P C B 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 3 OP1 C B 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 4 OP2 C B 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 5 O5' C B 35 5.896 19.289 5.792 1.00 34.48 O
ATOM 6 C5' C B 35 4.717 19.993 6.175 1.00 33.87 C
ATOM 7 C4' C B 35 4.450 19.790 7.645 1.00 33.30 C
ATOM 8 O4' C B 35 3.902 18.460 7.849 1.00 32.75 O
ATOM 9 C3' C B 35 5.683 19.833 8.533 1.00 33.59 C
ATOM 10 O3' C B 35 5.983 21.174 8.909 1.00 34.41 O
ATOM 11 C2' C B 35 5.239 19.007 9.733 1.00 32.94 C
ATOM 12 O2' C B 35 4.432 19.738 10.631 1.00 33.35 O
ATOM 13 C1' C B 35 4.399 17.920 9.060 1.00 32.29 C
ATOM 14 N1 C B 35 5.156 16.697 8.749 1.00 30.92 N
ATOM 15 C2 C B 35 5.633 15.918 9.805 1.00 30.44 C
ATOM 16 O2 C B 35 5.411 16.285 10.965 1.00 30.29 O
ATOM 17 N3 C B 35 6.323 14.785 9.536 1.00 30.11 N
ATOM 18 C4 C B 35 6.540 14.422 8.270 1.00 29.90 C
ATOM 19 N4 C B 35 7.221 13.296 8.052 1.00 29.31 N
ATOM 20 C5 C B 35 6.066 15.199 7.171 1.00 30.22 C
ATOM 21 C6 C B 35 5.386 16.320 7.455 1.00 30.82 C
ATOM 22 P U B 36 7.499 21.704 8.829 1.00 36.25 P
ATOM 23 OP1 U B 36 7.539 23.083 9.376 1.00 36.18 O
ATOM 24 OP2 U B 36 8.005 21.445 7.457 1.00 35.49 O
ATOM 25 O5' U B 36 8.288 20.751 9.830 1.00 34.89 O
TER
ATOM 2 P U A 60 8.045 9.996 17.387 1.00 29.84 P
ATOM 3 OP1 U A 60 7.252 10.623 18.478 1.00 30.61 O
ATOM 4 OP2 U A 60 7.848 8.561 17.071 1.00 29.35 O
ATOM 5 O5' U A 60 7.816 10.836 16.052 1.00 28.96 O
ATOM 6 C5' U A 60 7.945 12.251 16.058 1.00 27.85 C
ATOM 7 C4' U A 60 7.705 12.817 14.677 1.00 27.55 C
ATOM 8 O4' U A 60 8.813 12.445 13.809 1.00 26.73 O
ATOM 9 C3' U A 60 6.479 12.292 13.945 1.00 27.87 C
ATOM 10 O3' U A 60 5.294 12.980 14.329 1.00 29.47 O
ATOM 11 C2' U A 60 6.843 12.559 12.491 1.00 26.35 C
ATOM 12 O2' U A 60 6.674 13.914 12.127 1.00 27.00 O
ATOM 13 C1' U A 60 8.334 12.227 12.490 1.00 25.68 C
ATOM 14 N1 U A 60 8.577 10.826 12.118 1.00 23.52 N
ATOM 15 C2 U A 60 8.677 10.538 10.772 1.00 22.38 C
ATOM 16 O2 U A 60 8.585 11.392 9.908 1.00 23.40 O
ATOM 17 N3 U A 60 8.884 9.215 10.476 1.00 21.89 N
ATOM 18 C4 U A 60 8.997 8.175 11.369 1.00 21.23 C
ATOM 19 O4 U A 60 9.178 7.029 10.948 1.00 22.42 O
ATOM 20 C5 U A 60 8.888 8.555 12.743 1.00 21.59 C
ATOM 21 C6 U A 60 8.689 9.838 13.063 1.00 22.09 C
ATOM 22 P A A 61 3.878 12.221 14.259 1.00 30.19 P
ATOM 23 OP1 A A 61 2.885 13.072 14.963 1.00 29.89 O
ATOM 24 OP2 A A 61 4.066 10.812 14.682 1.00 29.67 O
ATOM 25 O5' A A 61 3.525 12.210 12.707 1.00 30.07 O
TER
ATOM 1 O3' U B 34 4.963 17.727 4.053 1.00 33.64 O
ATOM 2 P C B 35 6.113 18.825 4.286 1.00 35.01 P
ATOM 3 OP1 C B 35 5.848 19.990 3.404 1.00 35.44 O
ATOM 4 OP2 C B 35 7.425 18.130 4.208 1.00 35.05 O
ATOM 5 O5' C B 35 5.896 19.289 5.792 1.00 34.48 O
ATOM 6 C5' C B 35 4.717 19.993 6.175 1.00 33.87 C
ATOM 7 C4' C B 35 4.450 19.790 7.645 1.00 33.30 C
ATOM 8 O4' C B 35 3.902 18.460 7.849 1.00 32.75 O
ATOM 9 C3' C B 35 5.683 19.833 8.533 1.00 33.59 C
ATOM 10 O3' C B 35 5.983 21.174 8.909 1.00 34.41 O
ATOM 11 C2' C B 35 5.239 19.007 9.733 1.00 32.94 C
ATOM 12 O2' C B 35 4.432 19.738 10.631 1.00 33.35 O
ATOM 13 C1' C B 35 4.399 17.920 9.060 1.00 32.29 C
ATOM 14 N1 C B 35 5.156 16.697 8.749 1.00 30.92 N
ATOM 15 C2 C B 35 5.633 15.918 9.805 1.00 30.44 C
ATOM 16 O2 C B 35 5.411 16.285 10.965 1.00 30.29 O
ATOM 17 N3 C B 35 6.323 14.785 9.536 1.00 30.11 N
ATOM 18 C4 C B 35 6.540 14.422 8.270 1.00 29.90 C
ATOM 19 N4 C B 35 7.221 13.296 8.052 1.00 29.31 N
ATOM 20 C5 C B 35 6.066 15.199 7.171 1.00 30.22 C
ATOM 21 C6 C B 35 5.386 16.320 7.455 1.00 30.82 C
ATOM 22 P U B 36 7.499 21.704 8.829 1.00 36.25 P
ATOM 23 OP1 U B 36 7.539 23.083 9.376 1.00 36.18 O
ATOM 24 OP2 U B 36 8.005 21.445 7.457 1.00 35.49 O
ATOM 25 O5' U B 36 8.288 20.751 9.830 1.00 34.89 O
TER
Atoms:
C4: (8.997,8.175,11.369)
N3: (8.884,9.215,10.476)
OP1: (7.252,10.623,18.478)
OP2: (7.848,8.561,17.071)
C2: (8.677,10.538,10.772)
C1': (8.334,12.227,12.490)
C3': (6.479,12.292,13.945)
O5': (7.816,10.836,16.052)
O4': (8.813,12.445,13.809)
C5': (7.945,12.251,16.058)
P: (8.045,9.996,17.387)
C4': (7.705,12.817,14.677)
C2': (6.843,12.559,12.491)
O2': (6.674,13.914,12.127)
N1: (8.577,10.826,12.118)
O4: (9.178,7.029,10.948)
O2: (8.585,11.392,9.908)
C6: (8.689,9.838,13.063)
C5: (8.888,8.555,12.743)
O3': (5.294,12.980,14.329)
N3: (8.884,9.215,10.476)
OP1: (7.252,10.623,18.478)
OP2: (7.848,8.561,17.071)
C2: (8.677,10.538,10.772)
C1': (8.334,12.227,12.490)
C3': (6.479,12.292,13.945)
O5': (7.816,10.836,16.052)
O4': (8.813,12.445,13.809)
C5': (7.945,12.251,16.058)
P: (8.045,9.996,17.387)
C4': (7.705,12.817,14.677)
C2': (6.843,12.559,12.491)
O2': (6.674,13.914,12.127)
N1: (8.577,10.826,12.118)
O4: (9.178,7.029,10.948)
O2: (8.585,11.392,9.908)
C6: (8.689,9.838,13.063)
C5: (8.888,8.555,12.743)
O3': (5.294,12.980,14.329)
C2: (5.633,15.918,9.805)
OP1: (5.848,19.990,3.404)
OP2: (7.425,18.130,4.208)
C4: (6.540,14.422,8.270)
O5': (5.896,19.289,5.792)
C3': (5.683,19.833,8.533)
C1': (4.399,17.920,9.060)
O4': (3.902,18.460,7.849)
C5': (4.717,19.993,6.175)
P: (6.113,18.825,4.286)
O2: (5.411,16.285,10.965)
C4': (4.450,19.790,7.645)
C2': (5.239,19.007,9.733)
O2': (4.432,19.738,10.631)
N1: (5.156,16.697,8.749)
N3: (6.323,14.785,9.536)
N4: (7.221,13.296,8.052)
C6: (5.386,16.320,7.455)
C5: (6.066,15.199,7.171)
O3': (5.983,21.174,8.909)
OP1: (5.848,19.990,3.404)
OP2: (7.425,18.130,4.208)
C4: (6.540,14.422,8.270)
O5': (5.896,19.289,5.792)
C3': (5.683,19.833,8.533)
C1': (4.399,17.920,9.060)
O4': (3.902,18.460,7.849)
C5': (4.717,19.993,6.175)
P: (6.113,18.825,4.286)
O2: (5.411,16.285,10.965)
C4': (4.450,19.790,7.645)
C2': (5.239,19.007,9.733)
O2': (4.432,19.738,10.631)
N1: (5.156,16.697,8.749)
N3: (6.323,14.785,9.536)
N4: (7.221,13.296,8.052)
C6: (5.386,16.320,7.455)
C5: (6.066,15.199,7.171)
O3': (5.983,21.174,8.909)
Image (generated by PyMOL):