Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GOT:A60:A35
Extra
PDB:
ATOM 1 O3' U A 59 -9.656 -9.406 17.704 1.00 40.83 O
ATOM 2 P U A 60 -8.129 -8.997 17.377 1.00 41.41 P
ATOM 3 OP1 U A 60 -7.377 -9.442 18.597 1.00 42.85 O
ATOM 4 OP2 U A 60 -8.063 -7.571 16.955 1.00 41.26 O
ATOM 5 O5' U A 60 -7.707 -9.904 16.131 1.00 40.02 O
ATOM 6 C5' U A 60 -8.094 -11.269 16.057 1.00 40.48 C
ATOM 7 C4' U A 60 -7.837 -11.832 14.669 1.00 39.97 C
ATOM 8 O4' U A 60 -8.953 -11.506 13.806 1.00 40.94 O
ATOM 9 C3' U A 60 -6.622 -11.312 13.913 1.00 40.96 C
ATOM 10 O3' U A 60 -5.424 -11.971 14.314 1.00 42.65 O
ATOM 11 C2' U A 60 -6.986 -11.635 12.469 1.00 39.22 C
ATOM 12 O2' U A 60 -6.790 -12.980 12.105 1.00 41.34 O
ATOM 13 C1' U A 60 -8.489 -11.348 12.471 1.00 39.08 C
ATOM 14 N1 U A 60 -8.734 -9.964 12.063 1.00 37.82 N
ATOM 15 C2 U A 60 -8.782 -9.707 10.701 1.00 35.53 C
ATOM 16 O2 U A 60 -8.622 -10.575 9.865 1.00 37.88 O
ATOM 17 N3 U A 60 -8.994 -8.407 10.372 1.00 33.75 N
ATOM 18 C4 U A 60 -9.120 -7.349 11.238 1.00 34.00 C
ATOM 19 O4 U A 60 -9.107 -6.232 10.791 1.00 32.25 O
ATOM 20 C5 U A 60 -9.080 -7.693 12.634 1.00 33.87 C
ATOM 21 C6 U A 60 -8.892 -8.958 12.989 1.00 34.80 C
ATOM 22 P A A 61 -4.010 -11.217 14.175 1.00 43.75 P
ATOM 23 OP1 A A 61 -3.044 -12.063 14.906 1.00 43.76 O
ATOM 24 OP2 A A 61 -4.163 -9.779 14.533 1.00 42.76 O
ATOM 25 O5' A A 61 -3.686 -11.270 12.608 1.00 43.24 O
TER
ATOM 1 O3' U B 34 -5.140 -16.870 4.162 1.00 46.59 O
ATOM 2 P C B 35 -6.330 -17.919 4.431 1.00 49.27 P
ATOM 3 OP1 C B 35 -6.163 -19.100 3.534 1.00 48.38 O
ATOM 4 OP2 C B 35 -7.620 -17.173 4.426 1.00 47.38 O
ATOM 5 O5' C B 35 -6.059 -18.396 5.918 1.00 47.63 O
ATOM 6 C5' C B 35 -4.834 -19.015 6.273 1.00 47.64 C
ATOM 7 C4' C B 35 -4.564 -18.797 7.739 1.00 47.04 C
ATOM 8 O4' C B 35 -4.082 -17.445 7.933 1.00 47.19 O
ATOM 9 C3' C B 35 -5.779 -18.884 8.645 1.00 46.67 C
ATOM 10 O3' C B 35 -5.975 -20.227 9.024 1.00 47.30 O
ATOM 11 C2' C B 35 -5.344 -18.054 9.846 1.00 46.58 C
ATOM 12 O2' C B 35 -4.467 -18.753 10.694 1.00 46.40 O
ATOM 13 C1' C B 35 -4.534 -16.951 9.178 1.00 46.00 C
ATOM 14 N1 C B 35 -5.272 -15.723 8.922 1.00 44.97 N
ATOM 15 C2 C B 35 -5.705 -14.961 9.995 1.00 44.15 C
ATOM 16 O2 C B 35 -5.467 -15.364 11.141 1.00 43.87 O
ATOM 17 N3 C B 35 -6.361 -13.792 9.751 1.00 44.10 N
ATOM 18 C4 C B 35 -6.569 -13.394 8.482 1.00 44.02 C
ATOM 19 N4 C B 35 -7.189 -12.242 8.272 1.00 42.60 N
ATOM 20 C5 C B 35 -6.139 -14.167 7.375 1.00 43.72 C
ATOM 21 C6 C B 35 -5.508 -15.314 7.635 1.00 45.18 C
ATOM 22 P U B 36 -7.431 -20.882 8.894 1.00 48.10 P
ATOM 23 OP1 U B 36 -7.375 -22.251 9.466 1.00 48.07 O
ATOM 24 OP2 U B 36 -7.962 -20.682 7.510 1.00 47.83 O
ATOM 25 O5' U B 36 -8.327 -19.993 9.857 1.00 47.48 O
TER
ATOM 2 P U A 60 -8.129 -8.997 17.377 1.00 41.41 P
ATOM 3 OP1 U A 60 -7.377 -9.442 18.597 1.00 42.85 O
ATOM 4 OP2 U A 60 -8.063 -7.571 16.955 1.00 41.26 O
ATOM 5 O5' U A 60 -7.707 -9.904 16.131 1.00 40.02 O
ATOM 6 C5' U A 60 -8.094 -11.269 16.057 1.00 40.48 C
ATOM 7 C4' U A 60 -7.837 -11.832 14.669 1.00 39.97 C
ATOM 8 O4' U A 60 -8.953 -11.506 13.806 1.00 40.94 O
ATOM 9 C3' U A 60 -6.622 -11.312 13.913 1.00 40.96 C
ATOM 10 O3' U A 60 -5.424 -11.971 14.314 1.00 42.65 O
ATOM 11 C2' U A 60 -6.986 -11.635 12.469 1.00 39.22 C
ATOM 12 O2' U A 60 -6.790 -12.980 12.105 1.00 41.34 O
ATOM 13 C1' U A 60 -8.489 -11.348 12.471 1.00 39.08 C
ATOM 14 N1 U A 60 -8.734 -9.964 12.063 1.00 37.82 N
ATOM 15 C2 U A 60 -8.782 -9.707 10.701 1.00 35.53 C
ATOM 16 O2 U A 60 -8.622 -10.575 9.865 1.00 37.88 O
ATOM 17 N3 U A 60 -8.994 -8.407 10.372 1.00 33.75 N
ATOM 18 C4 U A 60 -9.120 -7.349 11.238 1.00 34.00 C
ATOM 19 O4 U A 60 -9.107 -6.232 10.791 1.00 32.25 O
ATOM 20 C5 U A 60 -9.080 -7.693 12.634 1.00 33.87 C
ATOM 21 C6 U A 60 -8.892 -8.958 12.989 1.00 34.80 C
ATOM 22 P A A 61 -4.010 -11.217 14.175 1.00 43.75 P
ATOM 23 OP1 A A 61 -3.044 -12.063 14.906 1.00 43.76 O
ATOM 24 OP2 A A 61 -4.163 -9.779 14.533 1.00 42.76 O
ATOM 25 O5' A A 61 -3.686 -11.270 12.608 1.00 43.24 O
TER
ATOM 1 O3' U B 34 -5.140 -16.870 4.162 1.00 46.59 O
ATOM 2 P C B 35 -6.330 -17.919 4.431 1.00 49.27 P
ATOM 3 OP1 C B 35 -6.163 -19.100 3.534 1.00 48.38 O
ATOM 4 OP2 C B 35 -7.620 -17.173 4.426 1.00 47.38 O
ATOM 5 O5' C B 35 -6.059 -18.396 5.918 1.00 47.63 O
ATOM 6 C5' C B 35 -4.834 -19.015 6.273 1.00 47.64 C
ATOM 7 C4' C B 35 -4.564 -18.797 7.739 1.00 47.04 C
ATOM 8 O4' C B 35 -4.082 -17.445 7.933 1.00 47.19 O
ATOM 9 C3' C B 35 -5.779 -18.884 8.645 1.00 46.67 C
ATOM 10 O3' C B 35 -5.975 -20.227 9.024 1.00 47.30 O
ATOM 11 C2' C B 35 -5.344 -18.054 9.846 1.00 46.58 C
ATOM 12 O2' C B 35 -4.467 -18.753 10.694 1.00 46.40 O
ATOM 13 C1' C B 35 -4.534 -16.951 9.178 1.00 46.00 C
ATOM 14 N1 C B 35 -5.272 -15.723 8.922 1.00 44.97 N
ATOM 15 C2 C B 35 -5.705 -14.961 9.995 1.00 44.15 C
ATOM 16 O2 C B 35 -5.467 -15.364 11.141 1.00 43.87 O
ATOM 17 N3 C B 35 -6.361 -13.792 9.751 1.00 44.10 N
ATOM 18 C4 C B 35 -6.569 -13.394 8.482 1.00 44.02 C
ATOM 19 N4 C B 35 -7.189 -12.242 8.272 1.00 42.60 N
ATOM 20 C5 C B 35 -6.139 -14.167 7.375 1.00 43.72 C
ATOM 21 C6 C B 35 -5.508 -15.314 7.635 1.00 45.18 C
ATOM 22 P U B 36 -7.431 -20.882 8.894 1.00 48.10 P
ATOM 23 OP1 U B 36 -7.375 -22.251 9.466 1.00 48.07 O
ATOM 24 OP2 U B 36 -7.962 -20.682 7.510 1.00 47.83 O
ATOM 25 O5' U B 36 -8.327 -19.993 9.857 1.00 47.48 O
TER
Atoms:
C4: (-9.120,-7.349,11.238)
N3: (-8.994,-8.407,10.372)
OP1: (-7.377,-9.442,18.597)
OP2: (-8.063,-7.571,16.955)
C2: (-8.782,-9.707,10.701)
C1': (-8.489,-11.348,12.471)
C3': (-6.622,-11.312,13.913)
O5': (-7.707,-9.904,16.131)
O4': (-8.953,-11.506,13.806)
C5': (-8.094,-11.269,16.057)
P: (-8.129,-8.997,17.377)
C4': (-7.837,-11.832,14.669)
C2': (-6.986,-11.635,12.469)
O2': (-6.790,-12.980,12.105)
N1: (-8.734,-9.964,12.063)
O4: (-9.107,-6.232,10.791)
O2: (-8.622,-10.575,9.865)
C6: (-8.892,-8.958,12.989)
C5: (-9.080,-7.693,12.634)
O3': (-5.424,-11.971,14.314)
N3: (-8.994,-8.407,10.372)
OP1: (-7.377,-9.442,18.597)
OP2: (-8.063,-7.571,16.955)
C2: (-8.782,-9.707,10.701)
C1': (-8.489,-11.348,12.471)
C3': (-6.622,-11.312,13.913)
O5': (-7.707,-9.904,16.131)
O4': (-8.953,-11.506,13.806)
C5': (-8.094,-11.269,16.057)
P: (-8.129,-8.997,17.377)
C4': (-7.837,-11.832,14.669)
C2': (-6.986,-11.635,12.469)
O2': (-6.790,-12.980,12.105)
N1: (-8.734,-9.964,12.063)
O4: (-9.107,-6.232,10.791)
O2: (-8.622,-10.575,9.865)
C6: (-8.892,-8.958,12.989)
C5: (-9.080,-7.693,12.634)
O3': (-5.424,-11.971,14.314)
C2: (-5.705,-14.961,9.995)
OP1: (-6.163,-19.100,3.534)
OP2: (-7.620,-17.173,4.426)
C4: (-6.569,-13.394,8.482)
O5': (-6.059,-18.396,5.918)
C3': (-5.779,-18.884,8.645)
C1': (-4.534,-16.951,9.178)
O4': (-4.082,-17.445,7.933)
C5': (-4.834,-19.015,6.273)
P: (-6.330,-17.919,4.431)
O2: (-5.467,-15.364,11.141)
C4': (-4.564,-18.797,7.739)
C2': (-5.344,-18.054,9.846)
O2': (-4.467,-18.753,10.694)
N1: (-5.272,-15.723,8.922)
N3: (-6.361,-13.792,9.751)
N4: (-7.189,-12.242,8.272)
C6: (-5.508,-15.314,7.635)
C5: (-6.139,-14.167,7.375)
O3': (-5.975,-20.227,9.024)
OP1: (-6.163,-19.100,3.534)
OP2: (-7.620,-17.173,4.426)
C4: (-6.569,-13.394,8.482)
O5': (-6.059,-18.396,5.918)
C3': (-5.779,-18.884,8.645)
C1': (-4.534,-16.951,9.178)
O4': (-4.082,-17.445,7.933)
C5': (-4.834,-19.015,6.273)
P: (-6.330,-17.919,4.431)
O2: (-5.467,-15.364,11.141)
C4': (-4.564,-18.797,7.739)
C2': (-5.344,-18.054,9.846)
O2': (-4.467,-18.753,10.694)
N1: (-5.272,-15.723,8.922)
N3: (-6.361,-13.792,9.751)
N4: (-7.189,-12.242,8.272)
C6: (-5.508,-15.314,7.635)
C5: (-6.139,-14.167,7.375)
O3': (-5.975,-20.227,9.024)
Image (generated by PyMOL):