Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D60:D35
Extra
PDB:
ATOM 1 O3' C A 59 25.869 7.132 -83.011 1.00 52.97 O
ATOM 2 P U A 60 27.244 7.055 -83.843 1.00 59.52 P
ATOM 3 OP1 U A 60 27.742 8.443 -83.994 1.00 54.78 O
ATOM 4 OP2 U A 60 26.972 6.262 -85.065 1.00 55.76 O
ATOM 5 O5' U A 60 28.205 6.238 -82.871 1.00 49.12 O
ATOM 6 C5' U A 60 29.020 6.900 -81.915 1.00 48.83 C
ATOM 7 C4' U A 60 29.982 5.942 -81.261 1.00 52.47 C
ATOM 8 O4' U A 60 29.243 4.815 -80.713 1.00 48.12 O
ATOM 9 C3' U A 60 31.008 5.299 -82.184 1.00 58.61 C
ATOM 10 O3' U A 60 32.138 6.122 -82.426 1.00 62.23 O
ATOM 11 C2' U A 60 31.339 4.000 -81.464 1.00 52.89 C
ATOM 12 O2' U A 60 32.219 4.241 -80.375 1.00 49.54 O
ATOM 13 C1' U A 60 29.971 3.620 -80.903 1.00 46.89 C
ATOM 14 N1 U A 60 29.212 2.758 -81.836 1.00 41.66 N
ATOM 15 C2 U A 60 29.563 1.426 -81.936 1.00 45.45 C
ATOM 16 O2 U A 60 30.470 0.930 -81.291 1.00 44.42 O
ATOM 17 N3 U A 60 28.813 0.693 -82.825 1.00 41.40 N
ATOM 18 C4 U A 60 27.768 1.146 -83.607 1.00 44.08 C
ATOM 19 O4 U A 60 27.188 0.361 -84.361 1.00 47.56 O
ATOM 20 C5 U A 60 27.466 2.536 -83.446 1.00 43.68 C
ATOM 21 C6 U A 60 28.181 3.272 -82.587 1.00 44.05 C
ATOM 22 P A A 61 33.051 5.879 -83.729 1.00 62.35 P
ATOM 23 OP1 A A 61 34.024 6.992 -83.795 1.00 58.26 O
ATOM 24 OP2 A A 61 32.131 5.669 -84.874 1.00 44.92 O
ATOM 25 O5' A A 61 33.806 4.520 -83.386 1.00 57.34 O
TER
ATOM 1 O3' U B 34 38.190 -1.562 -77.146 1.00 54.09 O
ATOM 2 P C B 35 37.768 -1.257 -75.624 1.00 63.19 P
ATOM 3 OP1 C B 35 38.935 -1.589 -74.769 1.00 65.55 O
ATOM 4 OP2 C B 35 36.483 -1.956 -75.378 1.00 57.83 O
ATOM 5 O5' C B 35 37.532 0.319 -75.632 1.00 53.20 O
ATOM 6 C5' C B 35 38.619 1.225 -75.497 1.00 56.78 C
ATOM 7 C4' C B 35 38.322 2.545 -76.166 1.00 52.13 C
ATOM 8 O4' C B 35 38.128 2.334 -77.589 1.00 50.14 O
ATOM 9 C3' C B 35 37.051 3.254 -75.709 1.00 54.60 C
ATOM 10 O3' C B 35 37.244 4.031 -74.538 1.00 50.97 O
ATOM 11 C2' C B 35 36.666 4.084 -76.927 1.00 51.63 C
ATOM 12 O2' C B 35 37.433 5.277 -76.983 1.00 59.25 O
ATOM 13 C1' C B 35 37.105 3.175 -78.074 1.00 48.60 C
ATOM 14 N1 C B 35 36.001 2.325 -78.572 1.00 47.84 N
ATOM 15 C2 C B 35 34.838 2.908 -79.083 1.00 50.65 C
ATOM 16 O2 C B 35 34.735 4.144 -79.099 1.00 55.48 O
ATOM 17 N3 C B 35 33.845 2.108 -79.539 1.00 50.35 N
ATOM 18 C4 C B 35 33.984 0.782 -79.508 1.00 47.71 C
ATOM 19 N4 C B 35 32.979 0.036 -79.970 1.00 45.03 N
ATOM 20 C5 C B 35 35.161 0.162 -79.001 1.00 50.57 C
ATOM 21 C6 C B 35 36.133 0.964 -78.552 1.00 49.14 C
ATOM 22 P U B 36 36.333 3.786 -73.236 1.00 55.85 P
ATOM 23 OP1 U B 36 36.759 4.776 -72.215 1.00 54.59 O
ATOM 24 OP2 U B 36 36.422 2.341 -72.908 1.00 58.83 O
ATOM 25 O5' U B 36 34.866 4.136 -73.753 1.00 53.35 O
TER
ATOM 2 P U A 60 27.244 7.055 -83.843 1.00 59.52 P
ATOM 3 OP1 U A 60 27.742 8.443 -83.994 1.00 54.78 O
ATOM 4 OP2 U A 60 26.972 6.262 -85.065 1.00 55.76 O
ATOM 5 O5' U A 60 28.205 6.238 -82.871 1.00 49.12 O
ATOM 6 C5' U A 60 29.020 6.900 -81.915 1.00 48.83 C
ATOM 7 C4' U A 60 29.982 5.942 -81.261 1.00 52.47 C
ATOM 8 O4' U A 60 29.243 4.815 -80.713 1.00 48.12 O
ATOM 9 C3' U A 60 31.008 5.299 -82.184 1.00 58.61 C
ATOM 10 O3' U A 60 32.138 6.122 -82.426 1.00 62.23 O
ATOM 11 C2' U A 60 31.339 4.000 -81.464 1.00 52.89 C
ATOM 12 O2' U A 60 32.219 4.241 -80.375 1.00 49.54 O
ATOM 13 C1' U A 60 29.971 3.620 -80.903 1.00 46.89 C
ATOM 14 N1 U A 60 29.212 2.758 -81.836 1.00 41.66 N
ATOM 15 C2 U A 60 29.563 1.426 -81.936 1.00 45.45 C
ATOM 16 O2 U A 60 30.470 0.930 -81.291 1.00 44.42 O
ATOM 17 N3 U A 60 28.813 0.693 -82.825 1.00 41.40 N
ATOM 18 C4 U A 60 27.768 1.146 -83.607 1.00 44.08 C
ATOM 19 O4 U A 60 27.188 0.361 -84.361 1.00 47.56 O
ATOM 20 C5 U A 60 27.466 2.536 -83.446 1.00 43.68 C
ATOM 21 C6 U A 60 28.181 3.272 -82.587 1.00 44.05 C
ATOM 22 P A A 61 33.051 5.879 -83.729 1.00 62.35 P
ATOM 23 OP1 A A 61 34.024 6.992 -83.795 1.00 58.26 O
ATOM 24 OP2 A A 61 32.131 5.669 -84.874 1.00 44.92 O
ATOM 25 O5' A A 61 33.806 4.520 -83.386 1.00 57.34 O
TER
ATOM 1 O3' U B 34 38.190 -1.562 -77.146 1.00 54.09 O
ATOM 2 P C B 35 37.768 -1.257 -75.624 1.00 63.19 P
ATOM 3 OP1 C B 35 38.935 -1.589 -74.769 1.00 65.55 O
ATOM 4 OP2 C B 35 36.483 -1.956 -75.378 1.00 57.83 O
ATOM 5 O5' C B 35 37.532 0.319 -75.632 1.00 53.20 O
ATOM 6 C5' C B 35 38.619 1.225 -75.497 1.00 56.78 C
ATOM 7 C4' C B 35 38.322 2.545 -76.166 1.00 52.13 C
ATOM 8 O4' C B 35 38.128 2.334 -77.589 1.00 50.14 O
ATOM 9 C3' C B 35 37.051 3.254 -75.709 1.00 54.60 C
ATOM 10 O3' C B 35 37.244 4.031 -74.538 1.00 50.97 O
ATOM 11 C2' C B 35 36.666 4.084 -76.927 1.00 51.63 C
ATOM 12 O2' C B 35 37.433 5.277 -76.983 1.00 59.25 O
ATOM 13 C1' C B 35 37.105 3.175 -78.074 1.00 48.60 C
ATOM 14 N1 C B 35 36.001 2.325 -78.572 1.00 47.84 N
ATOM 15 C2 C B 35 34.838 2.908 -79.083 1.00 50.65 C
ATOM 16 O2 C B 35 34.735 4.144 -79.099 1.00 55.48 O
ATOM 17 N3 C B 35 33.845 2.108 -79.539 1.00 50.35 N
ATOM 18 C4 C B 35 33.984 0.782 -79.508 1.00 47.71 C
ATOM 19 N4 C B 35 32.979 0.036 -79.970 1.00 45.03 N
ATOM 20 C5 C B 35 35.161 0.162 -79.001 1.00 50.57 C
ATOM 21 C6 C B 35 36.133 0.964 -78.552 1.00 49.14 C
ATOM 22 P U B 36 36.333 3.786 -73.236 1.00 55.85 P
ATOM 23 OP1 U B 36 36.759 4.776 -72.215 1.00 54.59 O
ATOM 24 OP2 U B 36 36.422 2.341 -72.908 1.00 58.83 O
ATOM 25 O5' U B 36 34.866 4.136 -73.753 1.00 53.35 O
TER
Atoms:
C4: (27.768,1.146,-83.607)
N3: (28.813,0.693,-82.825)
OP1: (27.742,8.443,-83.994)
OP2: (26.972,6.262,-85.065)
C2: (29.563,1.426,-81.936)
C1': (29.971,3.620,-80.903)
C3': (31.008,5.299,-82.184)
O5': (28.205,6.238,-82.871)
O4': (29.243,4.815,-80.713)
C5': (29.020,6.900,-81.915)
P: (27.244,7.055,-83.843)
C4': (29.982,5.942,-81.261)
C2': (31.339,4.000,-81.464)
O2': (32.219,4.241,-80.375)
N1: (29.212,2.758,-81.836)
O4: (27.188,0.361,-84.361)
O2: (30.470,0.930,-81.291)
C6: (28.181,3.272,-82.587)
C5: (27.466,2.536,-83.446)
O3': (32.138,6.122,-82.426)
N3: (28.813,0.693,-82.825)
OP1: (27.742,8.443,-83.994)
OP2: (26.972,6.262,-85.065)
C2: (29.563,1.426,-81.936)
C1': (29.971,3.620,-80.903)
C3': (31.008,5.299,-82.184)
O5': (28.205,6.238,-82.871)
O4': (29.243,4.815,-80.713)
C5': (29.020,6.900,-81.915)
P: (27.244,7.055,-83.843)
C4': (29.982,5.942,-81.261)
C2': (31.339,4.000,-81.464)
O2': (32.219,4.241,-80.375)
N1: (29.212,2.758,-81.836)
O4: (27.188,0.361,-84.361)
O2: (30.470,0.930,-81.291)
C6: (28.181,3.272,-82.587)
C5: (27.466,2.536,-83.446)
O3': (32.138,6.122,-82.426)
C2: (34.838,2.908,-79.083)
OP1: (38.935,-1.589,-74.769)
OP2: (36.483,-1.956,-75.378)
C4: (33.984,0.782,-79.508)
O5': (37.532,0.319,-75.632)
C3': (37.051,3.254,-75.709)
C1': (37.105,3.175,-78.074)
O4': (38.128,2.334,-77.589)
C5': (38.619,1.225,-75.497)
P: (37.768,-1.257,-75.624)
O2: (34.735,4.144,-79.099)
C4': (38.322,2.545,-76.166)
C2': (36.666,4.084,-76.927)
O2': (37.433,5.277,-76.983)
N1: (36.001,2.325,-78.572)
N3: (33.845,2.108,-79.539)
N4: (32.979,0.036,-79.970)
C6: (36.133,0.964,-78.552)
C5: (35.161,0.162,-79.001)
O3': (37.244,4.031,-74.538)
OP1: (38.935,-1.589,-74.769)
OP2: (36.483,-1.956,-75.378)
C4: (33.984,0.782,-79.508)
O5': (37.532,0.319,-75.632)
C3': (37.051,3.254,-75.709)
C1': (37.105,3.175,-78.074)
O4': (38.128,2.334,-77.589)
C5': (38.619,1.225,-75.497)
P: (37.768,-1.257,-75.624)
O2: (34.735,4.144,-79.099)
C4': (38.322,2.545,-76.166)
C2': (36.666,4.084,-76.927)
O2': (37.433,5.277,-76.983)
N1: (36.001,2.325,-78.572)
N3: (33.845,2.108,-79.539)
N4: (32.979,0.036,-79.970)
C6: (36.133,0.964,-78.552)
C5: (35.161,0.162,-79.001)
O3': (37.244,4.031,-74.538)
Image (generated by PyMOL):