ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:964:9111

Extra

PDB:
ATOM 1 O3' C A 63 53.548 30.230 125.357 1.00 71.87 O
ATOM 2 P A A 64 52.695 31.592 125.289 1.00 73.77 P
ATOM 3 OP1 A A 64 52.374 31.985 126.687 1.00 74.84 O
ATOM 4 OP2 A A 64 51.588 31.424 124.306 1.00 72.11 O
ATOM 5 O5' A A 64 53.730 32.667 124.729 1.00 75.47 O
ATOM 6 C5' A A 64 55.059 32.799 125.293 1.00 78.15 C
ATOM 7 C4' A A 64 55.670 34.120 124.881 1.00 79.75 C
ATOM 8 O4' A A 64 55.769 34.182 123.439 1.00 80.62 O
ATOM 9 C3' A A 64 54.865 35.332 125.316 1.00 79.67 C
ATOM 10 O3' A A 64 55.306 35.616 126.663 1.00 79.23 O
ATOM 11 C2' A A 64 55.084 36.351 124.189 1.00 80.06 C
ATOM 12 O2' A A 64 56.235 37.154 124.339 1.00 83.33 O
ATOM 13 C1' A A 64 55.328 35.441 122.978 1.00 80.11 C
ATOM 14 N9 A A 64 54.280 35.197 121.985 1.00 79.66 N
ATOM 15 C8 A A 64 53.046 34.614 122.138 1.00 79.33 C
ATOM 16 N7 A A 64 52.410 34.420 121.007 1.00 78.28 N
ATOM 17 C5 A A 64 53.270 34.941 120.048 1.00 79.00 C
ATOM 18 C6 A A 64 53.194 35.026 118.644 1.00 79.13 C
ATOM 19 N6 A A 64 52.177 34.550 117.923 1.00 80.79 N
ATOM 20 N1 A A 64 54.219 35.615 117.994 1.00 78.38 N
ATOM 21 C2 A A 64 55.248 36.072 118.706 1.00 77.12 C
ATOM 22 N3 A A 64 55.444 36.039 120.017 1.00 78.35 N
ATOM 23 C4 A A 64 54.408 35.452 120.640 1.00 79.25 C
ATOM 24 P G A 65 55.701 37.111 127.133 1.00 79.28 P
ATOM 25 OP1 G A 65 55.546 37.102 128.609 1.00 80.09 O
ATOM 26 OP2 G A 65 54.981 38.135 126.330 1.00 80.68 O
ATOM 27 O5' G A 65 57.264 37.230 126.855 1.00 76.14 O
TER

ATOM 1 O3' U B 110 45.349 35.784 117.815 1.00 68.92 O
ATOM 2 P U B 111 46.265 34.483 117.676 1.00 67.07 P
ATOM 3 OP1 U B 111 45.508 33.481 116.876 1.00 65.70 O
ATOM 4 OP2 U B 111 46.746 34.134 119.027 1.00 67.27 O
ATOM 5 O5' U B 111 47.502 34.993 116.816 1.00 66.28 O
ATOM 6 C5' U B 111 47.308 35.506 115.485 1.00 62.40 C
ATOM 7 C4' U B 111 48.582 36.116 114.969 1.00 59.69 C
ATOM 8 O4' U B 111 48.918 37.275 115.763 1.00 58.92 O
ATOM 9 C3' U B 111 49.818 35.256 115.126 1.00 59.04 C
ATOM 10 O3' U B 111 49.874 34.269 114.108 1.00 58.28 O
ATOM 11 C2' U B 111 50.939 36.281 114.993 1.00 59.00 C
ATOM 12 O2' U B 111 51.220 36.585 113.645 1.00 58.94 O
ATOM 13 C1' U B 111 50.307 37.518 115.643 1.00 59.75 C
ATOM 14 N1 U B 111 50.847 37.908 116.957 1.00 60.86 N
ATOM 15 C2 U B 111 51.652 39.032 117.014 1.00 61.35 C
ATOM 16 O2 U B 111 51.915 39.710 116.049 1.00 63.57 O
ATOM 17 N3 U B 111 52.138 39.336 118.253 1.00 62.06 N
ATOM 18 C4 U B 111 51.909 38.656 119.421 1.00 63.03 C
ATOM 19 O4 U B 111 52.465 39.031 120.459 1.00 64.83 O
ATOM 20 C5 U B 111 51.055 37.518 119.288 1.00 61.73 C
ATOM 21 C6 U B 111 50.568 37.190 118.090 1.00 60.41 C
ATOM 22 P C B 112 50.354 32.784 114.472 1.00 59.91 P
ATOM 23 OP1 C B 112 50.337 31.978 113.229 1.00 59.20 O
ATOM 24 OP2 C B 112 49.591 32.323 115.657 1.00 58.98 O
ATOM 25 O5' C B 112 51.878 32.968 114.881 1.00 58.91 O
TER

Atoms:
OP1: (52.374,31.985,126.687)
OP2: (51.588,31.424,124.306)
C3': (54.865,35.332,125.316)
C1': (55.328,35.441,122.978)
C5': (55.059,32.799,125.293)
O4': (55.769,34.182,123.439)
C8: (53.046,34.614,122.138)
O2': (56.235,37.154,124.339)
C6: (53.194,35.026,118.644)
C5: (53.270,34.941,120.048)
C4: (54.408,35.452,120.640)
P: (52.695,31.592,125.289)
C4': (55.670,34.120,124.881)
C2': (55.084,36.351,124.189)
C2: (55.248,36.072,118.706)
N1: (54.219,35.615,117.994)
N3: (55.444,36.039,120.017)
N6: (52.177,34.550,117.923)
N7: (52.410,34.420,121.007)
N9: (54.280,35.197,121.985)
O5': (53.730,32.667,124.729)
O3': (55.306,35.616,126.663)
C4: (51.909,38.656,119.421)
N3: (52.138,39.336,118.253)
OP1: (45.508,33.481,116.876)
OP2: (46.746,34.134,119.027)
C2: (51.652,39.032,117.014)
C1': (50.307,37.518,115.643)
C3': (49.818,35.256,115.126)
O5': (47.502,34.993,116.816)
O4': (48.918,37.275,115.763)
C5': (47.308,35.506,115.485)
P: (46.265,34.483,117.676)
C4': (48.582,36.116,114.969)
C2': (50.939,36.281,114.993)
O2': (51.220,36.585,113.645)
N1: (50.847,37.908,116.957)
O4: (52.465,39.031,120.459)
O2: (51.915,39.710,116.049)
C6: (50.568,37.190,118.090)
C5: (51.055,37.518,119.288)
O3': (49.874,34.269,114.108)
Image (generated by PyMOL):
PyMOL image
show in jmol