Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:2562:2565
Extra
PDB:
ATOM 1 O3' G A 561 -65.927 -2.100 31.068 1.00 84.76 O
ATOM 2 P U A 562 -65.356 -3.484 31.663 1.00 93.39 P
ATOM 3 OP1 U A 562 -64.371 -4.012 30.684 1.00 93.72 O
ATOM 4 OP2 U A 562 -66.523 -4.316 32.022 1.00 94.13 O
ATOM 5 O5' U A 562 -64.607 -3.016 32.983 1.00 91.89 O
ATOM 6 C5' U A 562 -63.615 -2.009 32.932 1.00 90.99 C
ATOM 7 C4' U A 562 -63.235 -1.560 34.305 1.00 89.71 C
ATOM 8 O4' U A 562 -64.370 -0.946 34.947 1.00 89.69 O
ATOM 9 C3' U A 562 -62.800 -2.657 35.259 1.00 89.28 C
ATOM 10 O3' U A 562 -61.433 -2.975 35.096 1.00 88.80 O
ATOM 11 C2' U A 562 -63.122 -2.079 36.639 1.00 88.36 C
ATOM 12 O2' U A 562 -62.036 -1.299 37.123 1.00 87.20 O
ATOM 13 C1' U A 562 -64.302 -1.146 36.341 1.00 88.84 C
ATOM 14 N1 U A 562 -65.592 -1.701 36.789 1.00 89.47 N
ATOM 15 C2 U A 562 -65.993 -1.593 38.121 1.00 88.84 C
ATOM 16 O2 U A 562 -65.324 -1.074 39.013 1.00 87.74 O
ATOM 17 N3 U A 562 -67.235 -2.149 38.370 1.00 89.61 N
ATOM 18 C4 U A 562 -68.073 -2.758 37.465 1.00 90.88 C
ATOM 19 O4 U A 562 -69.157 -3.198 37.830 1.00 91.47 O
ATOM 20 C5 U A 562 -67.578 -2.809 36.133 1.00 91.44 C
ATOM 21 C6 U A 562 -66.393 -2.290 35.841 1.00 90.75 C
ATOM 22 P G A 563 -60.926 -4.496 35.115 1.00 82.49 P
ATOM 23 OP1 G A 563 -59.453 -4.467 34.812 1.00 81.94 O
ATOM 24 OP2 G A 563 -61.823 -5.278 34.225 1.00 83.84 O
ATOM 25 O5' G A 563 -61.166 -4.918 36.626 1.00 81.84 O
TER
ATOM 1 O3' C B 564 -57.163 -3.993 45.949 1.00 80.28 O
ATOM 2 P C B 565 -55.713 -3.911 45.258 1.00 66.88 P
ATOM 3 OP1 C B 565 -55.220 -5.289 45.109 1.00 67.33 O
ATOM 4 OP2 C B 565 -54.909 -2.955 46.033 1.00 65.79 O
ATOM 5 O5' C B 565 -56.054 -3.288 43.846 1.00 67.48 O
ATOM 6 C5' C B 565 -55.887 -1.908 43.589 1.00 66.99 C
ATOM 7 C4' C B 565 -56.000 -1.656 42.124 1.00 67.71 C
ATOM 8 O4' C B 565 -57.189 -2.301 41.626 1.00 68.75 O
ATOM 9 C3' C B 565 -56.134 -0.214 41.678 1.00 67.47 C
ATOM 10 O3' C B 565 -54.878 0.436 41.604 1.00 66.74 O
ATOM 11 C2' C B 565 -56.819 -0.350 40.313 1.00 68.57 C
ATOM 12 O2' C B 565 -55.859 -0.586 39.294 1.00 68.81 O
ATOM 13 C1' C B 565 -57.650 -1.631 40.482 1.00 69.33 C
ATOM 14 N1 C B 565 -59.096 -1.371 40.631 1.00 69.82 N
ATOM 15 C2 C B 565 -59.874 -0.991 39.517 1.00 70.68 C
ATOM 16 O2 C B 565 -59.394 -0.822 38.387 1.00 71.05 O
ATOM 17 N3 C B 565 -61.192 -0.782 39.682 1.00 71.16 N
ATOM 18 C4 C B 565 -61.757 -0.953 40.878 1.00 70.83 C
ATOM 19 N4 C B 565 -63.074 -0.712 40.932 1.00 71.39 N
ATOM 20 C5 C B 565 -61.005 -1.362 42.028 1.00 69.97 C
ATOM 21 C6 C B 565 -59.692 -1.564 41.852 1.00 69.50 C
ATOM 22 P A B 566 -54.682 1.932 42.154 1.00 72.06 P
ATOM 23 OP1 A B 566 -53.303 2.332 41.834 1.00 71.53 O
ATOM 24 OP2 A B 566 -55.113 1.942 43.563 1.00 71.51 O
ATOM 25 O5' A B 566 -55.699 2.772 41.284 1.00 72.68 O
TER
ATOM 2 P U A 562 -65.356 -3.484 31.663 1.00 93.39 P
ATOM 3 OP1 U A 562 -64.371 -4.012 30.684 1.00 93.72 O
ATOM 4 OP2 U A 562 -66.523 -4.316 32.022 1.00 94.13 O
ATOM 5 O5' U A 562 -64.607 -3.016 32.983 1.00 91.89 O
ATOM 6 C5' U A 562 -63.615 -2.009 32.932 1.00 90.99 C
ATOM 7 C4' U A 562 -63.235 -1.560 34.305 1.00 89.71 C
ATOM 8 O4' U A 562 -64.370 -0.946 34.947 1.00 89.69 O
ATOM 9 C3' U A 562 -62.800 -2.657 35.259 1.00 89.28 C
ATOM 10 O3' U A 562 -61.433 -2.975 35.096 1.00 88.80 O
ATOM 11 C2' U A 562 -63.122 -2.079 36.639 1.00 88.36 C
ATOM 12 O2' U A 562 -62.036 -1.299 37.123 1.00 87.20 O
ATOM 13 C1' U A 562 -64.302 -1.146 36.341 1.00 88.84 C
ATOM 14 N1 U A 562 -65.592 -1.701 36.789 1.00 89.47 N
ATOM 15 C2 U A 562 -65.993 -1.593 38.121 1.00 88.84 C
ATOM 16 O2 U A 562 -65.324 -1.074 39.013 1.00 87.74 O
ATOM 17 N3 U A 562 -67.235 -2.149 38.370 1.00 89.61 N
ATOM 18 C4 U A 562 -68.073 -2.758 37.465 1.00 90.88 C
ATOM 19 O4 U A 562 -69.157 -3.198 37.830 1.00 91.47 O
ATOM 20 C5 U A 562 -67.578 -2.809 36.133 1.00 91.44 C
ATOM 21 C6 U A 562 -66.393 -2.290 35.841 1.00 90.75 C
ATOM 22 P G A 563 -60.926 -4.496 35.115 1.00 82.49 P
ATOM 23 OP1 G A 563 -59.453 -4.467 34.812 1.00 81.94 O
ATOM 24 OP2 G A 563 -61.823 -5.278 34.225 1.00 83.84 O
ATOM 25 O5' G A 563 -61.166 -4.918 36.626 1.00 81.84 O
TER
ATOM 1 O3' C B 564 -57.163 -3.993 45.949 1.00 80.28 O
ATOM 2 P C B 565 -55.713 -3.911 45.258 1.00 66.88 P
ATOM 3 OP1 C B 565 -55.220 -5.289 45.109 1.00 67.33 O
ATOM 4 OP2 C B 565 -54.909 -2.955 46.033 1.00 65.79 O
ATOM 5 O5' C B 565 -56.054 -3.288 43.846 1.00 67.48 O
ATOM 6 C5' C B 565 -55.887 -1.908 43.589 1.00 66.99 C
ATOM 7 C4' C B 565 -56.000 -1.656 42.124 1.00 67.71 C
ATOM 8 O4' C B 565 -57.189 -2.301 41.626 1.00 68.75 O
ATOM 9 C3' C B 565 -56.134 -0.214 41.678 1.00 67.47 C
ATOM 10 O3' C B 565 -54.878 0.436 41.604 1.00 66.74 O
ATOM 11 C2' C B 565 -56.819 -0.350 40.313 1.00 68.57 C
ATOM 12 O2' C B 565 -55.859 -0.586 39.294 1.00 68.81 O
ATOM 13 C1' C B 565 -57.650 -1.631 40.482 1.00 69.33 C
ATOM 14 N1 C B 565 -59.096 -1.371 40.631 1.00 69.82 N
ATOM 15 C2 C B 565 -59.874 -0.991 39.517 1.00 70.68 C
ATOM 16 O2 C B 565 -59.394 -0.822 38.387 1.00 71.05 O
ATOM 17 N3 C B 565 -61.192 -0.782 39.682 1.00 71.16 N
ATOM 18 C4 C B 565 -61.757 -0.953 40.878 1.00 70.83 C
ATOM 19 N4 C B 565 -63.074 -0.712 40.932 1.00 71.39 N
ATOM 20 C5 C B 565 -61.005 -1.362 42.028 1.00 69.97 C
ATOM 21 C6 C B 565 -59.692 -1.564 41.852 1.00 69.50 C
ATOM 22 P A B 566 -54.682 1.932 42.154 1.00 72.06 P
ATOM 23 OP1 A B 566 -53.303 2.332 41.834 1.00 71.53 O
ATOM 24 OP2 A B 566 -55.113 1.942 43.563 1.00 71.51 O
ATOM 25 O5' A B 566 -55.699 2.772 41.284 1.00 72.68 O
TER
Atoms:
C4: (-68.073,-2.758,37.465)
N3: (-67.235,-2.149,38.370)
OP1: (-64.371,-4.012,30.684)
OP2: (-66.523,-4.316,32.022)
C2: (-65.993,-1.593,38.121)
C1': (-64.302,-1.146,36.341)
C3': (-62.800,-2.657,35.259)
O5': (-64.607,-3.016,32.983)
O4': (-64.370,-0.946,34.947)
C5': (-63.615,-2.009,32.932)
P: (-65.356,-3.484,31.663)
C4': (-63.235,-1.560,34.305)
C2': (-63.122,-2.079,36.639)
O2': (-62.036,-1.299,37.123)
N1: (-65.592,-1.701,36.789)
O4: (-69.157,-3.198,37.830)
O2: (-65.324,-1.074,39.013)
C6: (-66.393,-2.290,35.841)
C5: (-67.578,-2.809,36.133)
O3': (-61.433,-2.975,35.096)
N3: (-67.235,-2.149,38.370)
OP1: (-64.371,-4.012,30.684)
OP2: (-66.523,-4.316,32.022)
C2: (-65.993,-1.593,38.121)
C1': (-64.302,-1.146,36.341)
C3': (-62.800,-2.657,35.259)
O5': (-64.607,-3.016,32.983)
O4': (-64.370,-0.946,34.947)
C5': (-63.615,-2.009,32.932)
P: (-65.356,-3.484,31.663)
C4': (-63.235,-1.560,34.305)
C2': (-63.122,-2.079,36.639)
O2': (-62.036,-1.299,37.123)
N1: (-65.592,-1.701,36.789)
O4: (-69.157,-3.198,37.830)
O2: (-65.324,-1.074,39.013)
C6: (-66.393,-2.290,35.841)
C5: (-67.578,-2.809,36.133)
O3': (-61.433,-2.975,35.096)
C2: (-59.874,-0.991,39.517)
OP1: (-55.220,-5.289,45.109)
OP2: (-54.909,-2.955,46.033)
C4: (-61.757,-0.953,40.878)
O5': (-56.054,-3.288,43.846)
C3': (-56.134,-0.214,41.678)
C1': (-57.650,-1.631,40.482)
O4': (-57.189,-2.301,41.626)
C5': (-55.887,-1.908,43.589)
P: (-55.713,-3.911,45.258)
O2: (-59.394,-0.822,38.387)
C4': (-56.000,-1.656,42.124)
C2': (-56.819,-0.350,40.313)
O2': (-55.859,-0.586,39.294)
N1: (-59.096,-1.371,40.631)
N3: (-61.192,-0.782,39.682)
N4: (-63.074,-0.712,40.932)
C6: (-59.692,-1.564,41.852)
C5: (-61.005,-1.362,42.028)
O3': (-54.878,0.436,41.604)
OP1: (-55.220,-5.289,45.109)
OP2: (-54.909,-2.955,46.033)
C4: (-61.757,-0.953,40.878)
O5': (-56.054,-3.288,43.846)
C3': (-56.134,-0.214,41.678)
C1': (-57.650,-1.631,40.482)
O4': (-57.189,-2.301,41.626)
C5': (-55.887,-1.908,43.589)
P: (-55.713,-3.911,45.258)
O2: (-59.394,-0.822,38.387)
C4': (-56.000,-1.656,42.124)
C2': (-56.819,-0.350,40.313)
O2': (-55.859,-0.586,39.294)
N1: (-59.096,-1.371,40.631)
N3: (-61.192,-0.782,39.682)
N4: (-63.074,-0.712,40.932)
C6: (-59.692,-1.564,41.852)
C5: (-61.005,-1.362,42.028)
O3': (-54.878,0.436,41.604)
Image (generated by PyMOL):