Doublet info:
Details
Nucleotide types:
UC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5F:6559:6562
Extra
PDB:
ATOM 1 O3' G A 558 233.628 6.138 286.646 1.00 77.96 O
ATOM 2 P U A 559 233.343 4.719 285.970 1.00 71.23 P
ATOM 3 OP1 U A 559 232.225 4.087 286.720 1.00 71.76 O
ATOM 4 OP2 U A 559 234.628 4.012 285.878 1.00 71.64 O
ATOM 5 O5' U A 559 232.871 5.114 284.511 1.00 69.93 O
ATOM 6 C5' U A 559 231.718 5.918 284.301 1.00 69.33 C
ATOM 7 C4' U A 559 231.582 6.280 282.856 1.00 68.17 C
ATOM 8 O4' U A 559 232.760 6.997 282.449 1.00 67.91 O
ATOM 9 C3' U A 559 231.474 5.110 281.897 1.00 67.81 C
ATOM 10 O3' U A 559 230.129 4.685 281.730 1.00 67.59 O
ATOM 11 C2' U A 559 232.116 5.633 280.613 1.00 66.91 C
ATOM 12 O2' U A 559 231.153 6.258 279.784 1.00 66.01 O
ATOM 13 C1' U A 559 233.087 6.701 281.126 1.00 67.15 C
ATOM 14 N1 U A 559 234.468 6.252 281.096 1.00 67.55 N
ATOM 15 C2 U A 559 235.158 6.410 279.910 1.00 66.88 C
ATOM 16 O2 U A 559 234.669 6.888 278.914 1.00 65.99 O
ATOM 17 N3 U A 559 236.439 5.969 279.899 1.00 67.30 N
ATOM 18 C4 U A 559 237.062 5.419 280.969 1.00 68.31 C
ATOM 19 O4 U A 559 238.218 5.078 280.808 1.00 68.60 O
ATOM 20 C5 U A 559 236.296 5.304 282.176 1.00 68.97 C
ATOM 21 C6 U A 559 235.036 5.723 282.214 1.00 68.59 C
ATOM 22 P G A 560 229.775 3.165 281.318 1.00 72.89 P
ATOM 23 OP1 G A 560 228.309 3.105 281.114 1.00 72.56 O
ATOM 24 OP2 G A 560 230.392 2.282 282.328 1.00 73.96 O
ATOM 25 O5' G A 560 230.513 2.985 279.932 1.00 72.14 O
TER
ATOM 1 O3' C B 561 228.191 3.016 270.225 1.00 75.87 O
ATOM 2 P C B 562 226.659 3.167 270.706 1.00 59.63 P
ATOM 3 OP1 C B 562 226.120 1.807 270.910 1.00 60.11 O
ATOM 4 OP2 C B 562 225.985 4.064 269.718 1.00 58.79 O
ATOM 5 O5' C B 562 226.785 3.908 272.092 1.00 60.13 O
ATOM 6 C5' C B 562 226.333 5.233 272.227 1.00 59.75 C
ATOM 7 C4' C B 562 226.218 5.622 273.661 1.00 60.39 C
ATOM 8 O4' C B 562 227.324 5.084 274.410 1.00 61.10 O
ATOM 9 C3' C B 562 226.255 7.102 273.939 1.00 60.13 C
ATOM 10 O3' C B 562 224.980 7.682 273.750 1.00 59.72 O
ATOM 11 C2' C B 562 226.750 7.166 275.388 1.00 60.99 C
ATOM 12 O2' C B 562 225.663 7.120 276.287 1.00 61.40 O
ATOM 13 C1' C B 562 227.549 5.868 275.543 1.00 61.55 C
ATOM 14 N1 C B 562 228.991 6.095 275.684 1.00 61.77 N
ATOM 15 C2 C B 562 229.497 6.487 276.924 1.00 62.47 C
ATOM 16 O2 C B 562 228.718 6.642 277.863 1.00 62.89 O
ATOM 17 N3 C B 562 230.830 6.698 277.093 1.00 62.74 N
ATOM 18 C4 C B 562 231.649 6.527 276.063 1.00 62.32 C
ATOM 19 N4 C B 562 232.943 6.735 276.273 1.00 62.64 N
ATOM 20 C5 C B 562 231.160 6.128 274.779 1.00 61.60 C
ATOM 21 C6 C B 562 229.840 5.904 274.638 1.00 61.35 C
ATOM 22 P A B 563 224.812 9.212 273.311 1.00 58.25 P
ATOM 23 OP1 A B 563 223.373 9.571 273.505 1.00 58.13 O
ATOM 24 OP2 A B 563 225.400 9.347 271.955 1.00 57.56 O
ATOM 25 O5' A B 563 225.699 9.976 274.392 1.00 58.75 O
TER
ATOM 2 P U A 559 233.343 4.719 285.970 1.00 71.23 P
ATOM 3 OP1 U A 559 232.225 4.087 286.720 1.00 71.76 O
ATOM 4 OP2 U A 559 234.628 4.012 285.878 1.00 71.64 O
ATOM 5 O5' U A 559 232.871 5.114 284.511 1.00 69.93 O
ATOM 6 C5' U A 559 231.718 5.918 284.301 1.00 69.33 C
ATOM 7 C4' U A 559 231.582 6.280 282.856 1.00 68.17 C
ATOM 8 O4' U A 559 232.760 6.997 282.449 1.00 67.91 O
ATOM 9 C3' U A 559 231.474 5.110 281.897 1.00 67.81 C
ATOM 10 O3' U A 559 230.129 4.685 281.730 1.00 67.59 O
ATOM 11 C2' U A 559 232.116 5.633 280.613 1.00 66.91 C
ATOM 12 O2' U A 559 231.153 6.258 279.784 1.00 66.01 O
ATOM 13 C1' U A 559 233.087 6.701 281.126 1.00 67.15 C
ATOM 14 N1 U A 559 234.468 6.252 281.096 1.00 67.55 N
ATOM 15 C2 U A 559 235.158 6.410 279.910 1.00 66.88 C
ATOM 16 O2 U A 559 234.669 6.888 278.914 1.00 65.99 O
ATOM 17 N3 U A 559 236.439 5.969 279.899 1.00 67.30 N
ATOM 18 C4 U A 559 237.062 5.419 280.969 1.00 68.31 C
ATOM 19 O4 U A 559 238.218 5.078 280.808 1.00 68.60 O
ATOM 20 C5 U A 559 236.296 5.304 282.176 1.00 68.97 C
ATOM 21 C6 U A 559 235.036 5.723 282.214 1.00 68.59 C
ATOM 22 P G A 560 229.775 3.165 281.318 1.00 72.89 P
ATOM 23 OP1 G A 560 228.309 3.105 281.114 1.00 72.56 O
ATOM 24 OP2 G A 560 230.392 2.282 282.328 1.00 73.96 O
ATOM 25 O5' G A 560 230.513 2.985 279.932 1.00 72.14 O
TER
ATOM 1 O3' C B 561 228.191 3.016 270.225 1.00 75.87 O
ATOM 2 P C B 562 226.659 3.167 270.706 1.00 59.63 P
ATOM 3 OP1 C B 562 226.120 1.807 270.910 1.00 60.11 O
ATOM 4 OP2 C B 562 225.985 4.064 269.718 1.00 58.79 O
ATOM 5 O5' C B 562 226.785 3.908 272.092 1.00 60.13 O
ATOM 6 C5' C B 562 226.333 5.233 272.227 1.00 59.75 C
ATOM 7 C4' C B 562 226.218 5.622 273.661 1.00 60.39 C
ATOM 8 O4' C B 562 227.324 5.084 274.410 1.00 61.10 O
ATOM 9 C3' C B 562 226.255 7.102 273.939 1.00 60.13 C
ATOM 10 O3' C B 562 224.980 7.682 273.750 1.00 59.72 O
ATOM 11 C2' C B 562 226.750 7.166 275.388 1.00 60.99 C
ATOM 12 O2' C B 562 225.663 7.120 276.287 1.00 61.40 O
ATOM 13 C1' C B 562 227.549 5.868 275.543 1.00 61.55 C
ATOM 14 N1 C B 562 228.991 6.095 275.684 1.00 61.77 N
ATOM 15 C2 C B 562 229.497 6.487 276.924 1.00 62.47 C
ATOM 16 O2 C B 562 228.718 6.642 277.863 1.00 62.89 O
ATOM 17 N3 C B 562 230.830 6.698 277.093 1.00 62.74 N
ATOM 18 C4 C B 562 231.649 6.527 276.063 1.00 62.32 C
ATOM 19 N4 C B 562 232.943 6.735 276.273 1.00 62.64 N
ATOM 20 C5 C B 562 231.160 6.128 274.779 1.00 61.60 C
ATOM 21 C6 C B 562 229.840 5.904 274.638 1.00 61.35 C
ATOM 22 P A B 563 224.812 9.212 273.311 1.00 58.25 P
ATOM 23 OP1 A B 563 223.373 9.571 273.505 1.00 58.13 O
ATOM 24 OP2 A B 563 225.400 9.347 271.955 1.00 57.56 O
ATOM 25 O5' A B 563 225.699 9.976 274.392 1.00 58.75 O
TER
Atoms:
C4: (237.062,5.419,280.969)
N3: (236.439,5.969,279.899)
OP1: (232.225,4.087,286.720)
OP2: (234.628,4.012,285.878)
C2: (235.158,6.410,279.910)
C1': (233.087,6.701,281.126)
C3': (231.474,5.110,281.897)
O5': (232.871,5.114,284.511)
O4': (232.760,6.997,282.449)
C5': (231.718,5.918,284.301)
P: (233.343,4.719,285.970)
C4': (231.582,6.280,282.856)
C2': (232.116,5.633,280.613)
O2': (231.153,6.258,279.784)
N1: (234.468,6.252,281.096)
O4: (238.218,5.078,280.808)
O2: (234.669,6.888,278.914)
C6: (235.036,5.723,282.214)
C5: (236.296,5.304,282.176)
O3': (230.129,4.685,281.730)
N3: (236.439,5.969,279.899)
OP1: (232.225,4.087,286.720)
OP2: (234.628,4.012,285.878)
C2: (235.158,6.410,279.910)
C1': (233.087,6.701,281.126)
C3': (231.474,5.110,281.897)
O5': (232.871,5.114,284.511)
O4': (232.760,6.997,282.449)
C5': (231.718,5.918,284.301)
P: (233.343,4.719,285.970)
C4': (231.582,6.280,282.856)
C2': (232.116,5.633,280.613)
O2': (231.153,6.258,279.784)
N1: (234.468,6.252,281.096)
O4: (238.218,5.078,280.808)
O2: (234.669,6.888,278.914)
C6: (235.036,5.723,282.214)
C5: (236.296,5.304,282.176)
O3': (230.129,4.685,281.730)
C2: (229.497,6.487,276.924)
OP1: (226.120,1.807,270.910)
OP2: (225.985,4.064,269.718)
C4: (231.649,6.527,276.063)
O5': (226.785,3.908,272.092)
C3': (226.255,7.102,273.939)
C1': (227.549,5.868,275.543)
O4': (227.324,5.084,274.410)
C5': (226.333,5.233,272.227)
P: (226.659,3.167,270.706)
O2: (228.718,6.642,277.863)
C4': (226.218,5.622,273.661)
C2': (226.750,7.166,275.388)
O2': (225.663,7.120,276.287)
N1: (228.991,6.095,275.684)
N3: (230.830,6.698,277.093)
N4: (232.943,6.735,276.273)
C6: (229.840,5.904,274.638)
C5: (231.160,6.128,274.779)
O3': (224.980,7.682,273.750)
OP1: (226.120,1.807,270.910)
OP2: (225.985,4.064,269.718)
C4: (231.649,6.527,276.063)
O5': (226.785,3.908,272.092)
C3': (226.255,7.102,273.939)
C1': (227.549,5.868,275.543)
O4': (227.324,5.084,274.410)
C5': (226.333,5.233,272.227)
P: (226.659,3.167,270.706)
O2: (228.718,6.642,277.863)
C4': (226.218,5.622,273.661)
C2': (226.750,7.166,275.388)
O2': (225.663,7.120,276.287)
N1: (228.991,6.095,275.684)
N3: (230.830,6.698,277.093)
N4: (232.943,6.735,276.273)
C6: (229.840,5.904,274.638)
C5: (231.160,6.128,274.779)
O3': (224.980,7.682,273.750)
Image (generated by PyMOL):