ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:964:9111

Extra

PDB:
ATOM 1 O3' C A 63 53.327 30.169 124.810 1.00 72.17 O
ATOM 2 P A A 64 52.475 31.516 124.595 1.00 75.55 P
ATOM 3 OP1 A A 64 51.960 31.949 125.922 1.00 74.59 O
ATOM 4 OP2 A A 64 51.519 31.276 123.482 1.00 75.44 O
ATOM 5 O5' A A 64 53.551 32.589 124.109 1.00 76.72 O
ATOM 6 C5' A A 64 54.853 32.684 124.731 1.00 79.38 C
ATOM 7 C4' A A 64 55.518 33.988 124.354 1.00 80.42 C
ATOM 8 O4' A A 64 55.680 34.046 122.919 1.00 81.36 O
ATOM 9 C3' A A 64 54.738 35.233 124.746 1.00 80.64 C
ATOM 10 O3' A A 64 55.077 35.516 126.123 1.00 80.15 O
ATOM 11 C2' A A 64 55.084 36.242 123.647 1.00 81.22 C
ATOM 12 O2' A A 64 56.292 36.941 123.864 1.00 83.76 O
ATOM 13 C1' A A 64 55.310 35.323 122.441 1.00 81.62 C
ATOM 14 N9 A A 64 54.240 35.126 121.465 1.00 81.49 N
ATOM 15 C8 A A 64 52.977 34.625 121.656 1.00 81.43 C
ATOM 16 N7 A A 64 52.306 34.449 120.542 1.00 81.28 N
ATOM 17 C5 A A 64 53.176 34.890 119.554 1.00 81.32 C
ATOM 18 C6 A A 64 53.070 34.948 118.151 1.00 81.19 C
ATOM 19 N6 A A 64 52.010 34.512 117.468 1.00 82.37 N
ATOM 20 N1 A A 64 54.110 35.464 117.463 1.00 80.31 N
ATOM 21 C2 A A 64 55.183 35.873 118.142 1.00 80.27 C
ATOM 22 N3 A A 64 55.411 35.853 119.452 1.00 80.56 N
ATOM 23 C4 A A 64 54.356 35.343 120.110 1.00 81.34 C
ATOM 24 P G A 65 55.536 36.991 126.600 1.00 78.68 P
ATOM 25 OP1 G A 65 55.303 37.032 128.063 1.00 78.91 O
ATOM 26 OP2 G A 65 54.936 38.044 125.741 1.00 80.79 O
ATOM 27 O5' G A 65 57.116 36.999 126.402 1.00 75.82 O
TER

ATOM 1 O3' U B 110 45.252 35.632 117.047 1.00 72.24 O
ATOM 2 P U B 111 46.048 34.249 116.954 1.00 71.73 P
ATOM 3 OP1 U B 111 45.219 33.296 116.162 1.00 70.87 O
ATOM 4 OP2 U B 111 46.488 33.886 118.323 1.00 71.58 O
ATOM 5 O5' U B 111 47.337 34.627 116.101 1.00 70.80 O
ATOM 6 C5' U B 111 47.206 35.152 114.767 1.00 66.62 C
ATOM 7 C4' U B 111 48.508 35.758 114.309 1.00 63.11 C
ATOM 8 O4' U B 111 48.831 36.915 115.116 1.00 62.58 O
ATOM 9 C3' U B 111 49.728 34.894 114.530 1.00 60.97 C
ATOM 10 O3' U B 111 49.802 33.880 113.540 1.00 59.74 O
ATOM 11 C2' U B 111 50.861 35.910 114.410 1.00 60.45 C
ATOM 12 O2' U B 111 51.195 36.171 113.066 1.00 61.02 O
ATOM 13 C1' U B 111 50.215 37.173 114.993 1.00 60.69 C
ATOM 14 N1 U B 111 50.751 37.639 116.284 1.00 60.98 N
ATOM 15 C2 U B 111 51.621 38.720 116.267 1.00 61.14 C
ATOM 16 O2 U B 111 51.921 39.318 115.257 1.00 62.99 O
ATOM 17 N3 U B 111 52.129 39.078 117.485 1.00 60.30 N
ATOM 18 C4 U B 111 51.864 38.495 118.695 1.00 59.69 C
ATOM 19 O4 U B 111 52.475 38.879 119.695 1.00 59.79 O
ATOM 20 C5 U B 111 50.933 37.411 118.641 1.00 60.08 C
ATOM 21 C6 U B 111 50.422 37.030 117.466 1.00 60.24 C
ATOM 22 P C B 112 50.331 32.422 113.943 1.00 59.63 P
ATOM 23 OP1 C B 112 50.390 31.594 112.716 1.00 58.82 O
ATOM 24 OP2 C B 112 49.547 31.955 115.112 1.00 60.11 O
ATOM 25 O5' C B 112 51.825 32.677 114.411 1.00 58.63 O
TER

Atoms:
OP1: (51.960,31.949,125.922)
OP2: (51.519,31.276,123.482)
C3': (54.738,35.233,124.746)
C1': (55.310,35.323,122.441)
C5': (54.853,32.684,124.731)
O4': (55.680,34.046,122.919)
C8: (52.977,34.625,121.656)
O2': (56.292,36.941,123.864)
C6: (53.070,34.948,118.151)
C5: (53.176,34.890,119.554)
C4: (54.356,35.343,120.110)
P: (52.475,31.516,124.595)
C4': (55.518,33.988,124.354)
C2': (55.084,36.242,123.647)
C2: (55.183,35.873,118.142)
N1: (54.110,35.464,117.463)
N3: (55.411,35.853,119.452)
N6: (52.010,34.512,117.468)
N7: (52.306,34.449,120.542)
N9: (54.240,35.126,121.465)
O5': (53.551,32.589,124.109)
O3': (55.077,35.516,126.123)
C4: (51.864,38.495,118.695)
N3: (52.129,39.078,117.485)
OP1: (45.219,33.296,116.162)
OP2: (46.488,33.886,118.323)
C2: (51.621,38.720,116.267)
C1': (50.215,37.173,114.993)
C3': (49.728,34.894,114.530)
O5': (47.337,34.627,116.101)
O4': (48.831,36.915,115.116)
C5': (47.206,35.152,114.767)
P: (46.048,34.249,116.954)
C4': (48.508,35.758,114.309)
C2': (50.861,35.910,114.410)
O2': (51.195,36.171,113.066)
N1: (50.751,37.639,116.284)
O4: (52.475,38.879,119.695)
O2: (51.921,39.318,115.257)
C6: (50.422,37.030,117.466)
C5: (50.933,37.411,118.641)
O3': (49.802,33.880,113.540)
Image (generated by PyMOL):
PyMOL image
show in jmol