Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:02505:02504
Extra
PDB:
ATOM 1 O3' U A2504 16.639 145.046 121.964 1.00 53.27 O
ATOM 2 P A A2505 15.364 145.986 122.239 1.00 55.51 P
ATOM 3 OP1 A A2505 15.823 147.150 123.024 1.00 54.61 O
ATOM 4 OP2 A A2505 14.307 145.097 122.783 1.00 55.13 O
ATOM 5 O5' A A2505 14.900 146.488 120.798 1.00 60.40 O
ATOM 6 C5' A A2505 13.522 146.856 120.532 1.00 68.40 C
ATOM 7 C4' A A2505 13.461 148.173 119.778 1.00 74.49 C
ATOM 8 O4' A A2505 14.008 149.219 120.620 1.00 76.83 O
ATOM 9 C3' A A2505 14.267 148.239 118.484 1.00 76.92 C
ATOM 10 O3' A A2505 13.507 147.790 117.361 1.00 77.22 O
ATOM 11 C2' A A2505 14.600 149.719 118.362 1.00 78.71 C
ATOM 12 O2' A A2505 13.530 150.440 117.770 1.00 77.67 O
ATOM 13 C1' A A2505 14.780 150.114 119.835 1.00 80.42 C
ATOM 14 N9 A A2505 16.152 150.107 120.367 1.00 83.78 N
ATOM 15 C8 A A2505 16.738 149.127 121.139 1.00 84.52 C
ATOM 16 N7 A A2505 17.957 149.417 121.533 1.00 84.92 N
ATOM 17 C5 A A2505 18.201 150.663 120.973 1.00 85.26 C
ATOM 18 C6 A A2505 19.316 151.520 121.027 1.00 85.17 C
ATOM 19 N6 A A2505 20.428 151.248 121.713 1.00 84.81 N
ATOM 20 N1 A A2505 19.245 152.687 120.349 1.00 85.66 N
ATOM 21 C2 A A2505 18.119 152.972 119.679 1.00 86.01 C
ATOM 22 N3 A A2505 17.000 152.255 119.562 1.00 85.87 N
ATOM 23 C4 A A2505 17.105 151.096 120.238 1.00 85.33 C
TER
ATOM 1 O3' G B2503 18.013 145.091 115.829 1.00 46.03 O
ATOM 2 P U B2504 16.989 145.864 116.780 1.00 45.85 P
ATOM 3 OP1 U B2504 15.695 145.125 116.707 1.00 43.58 O
ATOM 4 OP2 U B2504 17.036 147.303 116.426 1.00 46.80 O
ATOM 5 O5' U B2504 17.615 145.686 118.235 1.00 46.06 O
ATOM 6 C5' U B2504 17.556 144.414 118.916 1.00 46.25 C
ATOM 7 C4' U B2504 18.259 144.496 120.249 1.00 46.75 C
ATOM 8 O4' U B2504 19.645 144.853 120.032 1.00 46.01 O
ATOM 9 C3' U B2504 17.751 145.544 121.225 1.00 48.21 C
ATOM 10 O3' U B2504 16.639 145.046 121.964 1.00 53.27 O
ATOM 11 C2' U B2504 18.961 145.750 122.122 1.00 46.80 C
ATOM 12 O2' U B2504 19.096 144.710 123.067 1.00 46.43 O
ATOM 13 C1' U B2504 20.107 145.642 121.113 1.00 45.82 C
ATOM 14 N1 U B2504 20.576 146.932 120.583 1.00 45.59 N
ATOM 15 C2 U B2504 21.580 147.591 121.276 1.00 45.64 C
ATOM 16 O2 U B2504 22.078 147.158 122.303 1.00 45.81 O
ATOM 17 N3 U B2504 21.976 148.783 120.723 1.00 46.08 N
ATOM 18 C4 U B2504 21.482 149.377 119.578 1.00 46.04 C
ATOM 19 O4 U B2504 21.930 150.471 119.221 1.00 46.79 O
ATOM 20 C5 U B2504 20.449 148.640 118.922 1.00 45.78 C
ATOM 21 C6 U B2504 20.042 147.473 119.432 1.00 46.13 C
ATOM 22 P A B2505 15.364 145.986 122.239 1.00 55.51 P
ATOM 23 OP1 A B2505 15.823 147.150 123.024 1.00 54.61 O
ATOM 24 OP2 A B2505 14.307 145.097 122.783 1.00 55.13 O
ATOM 25 O5' A B2505 14.900 146.488 120.798 1.00 60.40 O
TER
ATOM 2 P A A2505 15.364 145.986 122.239 1.00 55.51 P
ATOM 3 OP1 A A2505 15.823 147.150 123.024 1.00 54.61 O
ATOM 4 OP2 A A2505 14.307 145.097 122.783 1.00 55.13 O
ATOM 5 O5' A A2505 14.900 146.488 120.798 1.00 60.40 O
ATOM 6 C5' A A2505 13.522 146.856 120.532 1.00 68.40 C
ATOM 7 C4' A A2505 13.461 148.173 119.778 1.00 74.49 C
ATOM 8 O4' A A2505 14.008 149.219 120.620 1.00 76.83 O
ATOM 9 C3' A A2505 14.267 148.239 118.484 1.00 76.92 C
ATOM 10 O3' A A2505 13.507 147.790 117.361 1.00 77.22 O
ATOM 11 C2' A A2505 14.600 149.719 118.362 1.00 78.71 C
ATOM 12 O2' A A2505 13.530 150.440 117.770 1.00 77.67 O
ATOM 13 C1' A A2505 14.780 150.114 119.835 1.00 80.42 C
ATOM 14 N9 A A2505 16.152 150.107 120.367 1.00 83.78 N
ATOM 15 C8 A A2505 16.738 149.127 121.139 1.00 84.52 C
ATOM 16 N7 A A2505 17.957 149.417 121.533 1.00 84.92 N
ATOM 17 C5 A A2505 18.201 150.663 120.973 1.00 85.26 C
ATOM 18 C6 A A2505 19.316 151.520 121.027 1.00 85.17 C
ATOM 19 N6 A A2505 20.428 151.248 121.713 1.00 84.81 N
ATOM 20 N1 A A2505 19.245 152.687 120.349 1.00 85.66 N
ATOM 21 C2 A A2505 18.119 152.972 119.679 1.00 86.01 C
ATOM 22 N3 A A2505 17.000 152.255 119.562 1.00 85.87 N
ATOM 23 C4 A A2505 17.105 151.096 120.238 1.00 85.33 C
TER
ATOM 1 O3' G B2503 18.013 145.091 115.829 1.00 46.03 O
ATOM 2 P U B2504 16.989 145.864 116.780 1.00 45.85 P
ATOM 3 OP1 U B2504 15.695 145.125 116.707 1.00 43.58 O
ATOM 4 OP2 U B2504 17.036 147.303 116.426 1.00 46.80 O
ATOM 5 O5' U B2504 17.615 145.686 118.235 1.00 46.06 O
ATOM 6 C5' U B2504 17.556 144.414 118.916 1.00 46.25 C
ATOM 7 C4' U B2504 18.259 144.496 120.249 1.00 46.75 C
ATOM 8 O4' U B2504 19.645 144.853 120.032 1.00 46.01 O
ATOM 9 C3' U B2504 17.751 145.544 121.225 1.00 48.21 C
ATOM 10 O3' U B2504 16.639 145.046 121.964 1.00 53.27 O
ATOM 11 C2' U B2504 18.961 145.750 122.122 1.00 46.80 C
ATOM 12 O2' U B2504 19.096 144.710 123.067 1.00 46.43 O
ATOM 13 C1' U B2504 20.107 145.642 121.113 1.00 45.82 C
ATOM 14 N1 U B2504 20.576 146.932 120.583 1.00 45.59 N
ATOM 15 C2 U B2504 21.580 147.591 121.276 1.00 45.64 C
ATOM 16 O2 U B2504 22.078 147.158 122.303 1.00 45.81 O
ATOM 17 N3 U B2504 21.976 148.783 120.723 1.00 46.08 N
ATOM 18 C4 U B2504 21.482 149.377 119.578 1.00 46.04 C
ATOM 19 O4 U B2504 21.930 150.471 119.221 1.00 46.79 O
ATOM 20 C5 U B2504 20.449 148.640 118.922 1.00 45.78 C
ATOM 21 C6 U B2504 20.042 147.473 119.432 1.00 46.13 C
ATOM 22 P A B2505 15.364 145.986 122.239 1.00 55.51 P
ATOM 23 OP1 A B2505 15.823 147.150 123.024 1.00 54.61 O
ATOM 24 OP2 A B2505 14.307 145.097 122.783 1.00 55.13 O
ATOM 25 O5' A B2505 14.900 146.488 120.798 1.00 60.40 O
TER
Atoms:
OP1: (15.823,147.150,123.024)
OP2: (14.307,145.097,122.783)
C3': (14.267,148.239,118.484)
C1': (14.780,150.114,119.835)
C5': (13.522,146.856,120.532)
O4': (14.008,149.219,120.620)
C8: (16.738,149.127,121.139)
O2': (13.530,150.440,117.770)
C6: (19.316,151.520,121.027)
C5: (18.201,150.663,120.973)
C4: (17.105,151.096,120.238)
P: (15.364,145.986,122.239)
C4': (13.461,148.173,119.778)
C2': (14.600,149.719,118.362)
C2: (18.119,152.972,119.679)
N1: (19.245,152.687,120.349)
N3: (17.000,152.255,119.562)
N6: (20.428,151.248,121.713)
N7: (17.957,149.417,121.533)
N9: (16.152,150.107,120.367)
O5': (14.900,146.488,120.798)
O3': (13.507,147.790,117.361)
OP2: (14.307,145.097,122.783)
C3': (14.267,148.239,118.484)
C1': (14.780,150.114,119.835)
C5': (13.522,146.856,120.532)
O4': (14.008,149.219,120.620)
C8: (16.738,149.127,121.139)
O2': (13.530,150.440,117.770)
C6: (19.316,151.520,121.027)
C5: (18.201,150.663,120.973)
C4: (17.105,151.096,120.238)
P: (15.364,145.986,122.239)
C4': (13.461,148.173,119.778)
C2': (14.600,149.719,118.362)
C2: (18.119,152.972,119.679)
N1: (19.245,152.687,120.349)
N3: (17.000,152.255,119.562)
N6: (20.428,151.248,121.713)
N7: (17.957,149.417,121.533)
N9: (16.152,150.107,120.367)
O5': (14.900,146.488,120.798)
O3': (13.507,147.790,117.361)
C4: (21.482,149.377,119.578)
N3: (21.976,148.783,120.723)
OP1: (15.695,145.125,116.707)
OP2: (17.036,147.303,116.426)
C2: (21.580,147.591,121.276)
C1': (20.107,145.642,121.113)
C3': (17.751,145.544,121.225)
O5': (17.615,145.686,118.235)
O4': (19.645,144.853,120.032)
C5': (17.556,144.414,118.916)
P: (16.989,145.864,116.780)
C4': (18.259,144.496,120.249)
C2': (18.961,145.750,122.122)
O2': (19.096,144.710,123.067)
N1: (20.576,146.932,120.583)
O4: (21.930,150.471,119.221)
O2: (22.078,147.158,122.303)
C6: (20.042,147.473,119.432)
C5: (20.449,148.640,118.922)
O3': (16.639,145.046,121.964)
N3: (21.976,148.783,120.723)
OP1: (15.695,145.125,116.707)
OP2: (17.036,147.303,116.426)
C2: (21.580,147.591,121.276)
C1': (20.107,145.642,121.113)
C3': (17.751,145.544,121.225)
O5': (17.615,145.686,118.235)
O4': (19.645,144.853,120.032)
C5': (17.556,144.414,118.916)
P: (16.989,145.864,116.780)
C4': (18.259,144.496,120.249)
C2': (18.961,145.750,122.122)
O2': (19.096,144.710,123.067)
N1: (20.576,146.932,120.583)
O4: (21.930,150.471,119.221)
O2: (22.078,147.158,122.303)
C6: (20.042,147.473,119.432)
C5: (20.449,148.640,118.922)
O3': (16.639,145.046,121.964)
Image (generated by PyMOL):