Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B65:B112
Extra
PDB:
ATOM 1 O3' A A 64 55.321 35.811 126.788 1.00 80.88 O
ATOM 2 P G A 65 55.857 37.285 127.163 1.00 78.90 P
ATOM 3 OP1 G A 65 55.592 37.404 128.613 1.00 80.09 O
ATOM 4 OP2 G A 65 55.335 38.329 126.239 1.00 79.17 O
ATOM 5 O5' G A 65 57.436 37.183 126.997 1.00 76.22 O
ATOM 6 C5' G A 65 58.306 37.664 128.035 1.00 74.84 C
ATOM 7 C4' G A 65 59.689 37.928 127.492 1.00 72.82 C
ATOM 8 O4' G A 65 60.299 36.672 127.105 1.00 72.06 O
ATOM 9 C3' G A 65 59.783 38.798 126.245 1.00 70.98 C
ATOM 10 O3' G A 65 59.739 40.187 126.550 1.00 69.54 O
ATOM 11 C2' G A 65 61.127 38.372 125.678 1.00 70.28 C
ATOM 12 O2' G A 65 62.223 38.927 126.366 1.00 69.89 O
ATOM 13 C1' G A 65 61.091 36.870 125.951 1.00 70.33 C
ATOM 14 N9 G A 65 60.459 36.175 124.838 1.00 68.64 N
ATOM 15 C8 G A 65 59.261 35.501 124.824 1.00 68.09 C
ATOM 16 N7 G A 65 58.978 34.990 123.657 1.00 66.75 N
ATOM 17 C5 G A 65 60.049 35.360 122.856 1.00 65.98 C
ATOM 18 C6 G A 65 60.310 35.100 121.488 1.00 65.14 C
ATOM 19 O6 G A 65 59.623 34.480 120.677 1.00 64.08 O
ATOM 20 N1 G A 65 61.525 35.649 121.087 1.00 64.82 N
ATOM 21 C2 G A 65 62.383 36.352 121.899 1.00 65.90 C
ATOM 22 N2 G A 65 63.519 36.776 121.343 1.00 64.15 N
ATOM 23 N3 G A 65 62.145 36.610 123.169 1.00 66.87 N
ATOM 24 C4 G A 65 60.970 36.086 123.577 1.00 67.22 C
ATOM 25 P C A 66 59.063 41.221 125.516 1.00 67.52 P
ATOM 26 OP1 C A 66 58.973 42.512 126.243 1.00 66.08 O
ATOM 27 OP2 C A 66 57.839 40.635 124.904 1.00 67.07 O
ATOM 28 O5' C A 66 60.151 41.366 124.366 1.00 66.94 O
TER
ATOM 1 O3' U B 111 49.930 34.335 114.052 1.00 62.65 O
ATOM 2 P C B 112 50.393 32.823 114.372 1.00 63.48 P
ATOM 3 OP1 C B 112 50.434 32.048 113.107 1.00 63.14 O
ATOM 4 OP2 C B 112 49.553 32.346 115.486 1.00 63.17 O
ATOM 5 O5' C B 112 51.892 32.942 114.905 1.00 61.98 O
ATOM 6 C5' C B 112 52.946 33.408 114.053 1.00 61.64 C
ATOM 7 C4' C B 112 54.221 32.634 114.307 1.00 62.81 C
ATOM 8 O4' C B 112 54.875 33.090 115.532 1.00 63.78 O
ATOM 9 C3' C B 112 54.083 31.120 114.431 1.00 63.75 C
ATOM 10 O3' C B 112 55.031 30.509 113.555 1.00 64.12 O
ATOM 11 C2' C B 112 54.391 30.884 115.916 1.00 64.11 C
ATOM 12 O2' C B 112 54.896 29.592 116.167 1.00 65.15 O
ATOM 13 C1' C B 112 55.435 31.975 116.180 1.00 63.88 C
ATOM 14 N1 C B 112 55.812 32.348 117.582 1.00 63.78 N
ATOM 15 C2 C B 112 57.046 33.033 117.804 1.00 63.26 C
ATOM 16 O2 C B 112 57.765 33.317 116.833 1.00 62.45 O
ATOM 17 N3 C B 112 57.414 33.352 119.071 1.00 62.02 N
ATOM 18 C4 C B 112 56.632 33.012 120.098 1.00 62.56 C
ATOM 19 N4 C B 112 57.056 33.312 121.324 1.00 62.20 N
ATOM 20 C5 C B 112 55.380 32.339 119.911 1.00 63.40 C
ATOM 21 C6 C B 112 55.012 32.031 118.650 1.00 63.87 C
ATOM 22 P G B 113 54.519 29.712 112.240 1.00 65.42 P
ATOM 23 OP1 G B 113 53.586 28.654 112.676 1.00 65.92 O
ATOM 24 OP2 G B 113 55.688 29.364 111.376 1.00 64.40 O
ATOM 25 O5' G B 113 53.627 30.751 111.446 1.00 63.43 O
TER
ATOM 2 P G A 65 55.857 37.285 127.163 1.00 78.90 P
ATOM 3 OP1 G A 65 55.592 37.404 128.613 1.00 80.09 O
ATOM 4 OP2 G A 65 55.335 38.329 126.239 1.00 79.17 O
ATOM 5 O5' G A 65 57.436 37.183 126.997 1.00 76.22 O
ATOM 6 C5' G A 65 58.306 37.664 128.035 1.00 74.84 C
ATOM 7 C4' G A 65 59.689 37.928 127.492 1.00 72.82 C
ATOM 8 O4' G A 65 60.299 36.672 127.105 1.00 72.06 O
ATOM 9 C3' G A 65 59.783 38.798 126.245 1.00 70.98 C
ATOM 10 O3' G A 65 59.739 40.187 126.550 1.00 69.54 O
ATOM 11 C2' G A 65 61.127 38.372 125.678 1.00 70.28 C
ATOM 12 O2' G A 65 62.223 38.927 126.366 1.00 69.89 O
ATOM 13 C1' G A 65 61.091 36.870 125.951 1.00 70.33 C
ATOM 14 N9 G A 65 60.459 36.175 124.838 1.00 68.64 N
ATOM 15 C8 G A 65 59.261 35.501 124.824 1.00 68.09 C
ATOM 16 N7 G A 65 58.978 34.990 123.657 1.00 66.75 N
ATOM 17 C5 G A 65 60.049 35.360 122.856 1.00 65.98 C
ATOM 18 C6 G A 65 60.310 35.100 121.488 1.00 65.14 C
ATOM 19 O6 G A 65 59.623 34.480 120.677 1.00 64.08 O
ATOM 20 N1 G A 65 61.525 35.649 121.087 1.00 64.82 N
ATOM 21 C2 G A 65 62.383 36.352 121.899 1.00 65.90 C
ATOM 22 N2 G A 65 63.519 36.776 121.343 1.00 64.15 N
ATOM 23 N3 G A 65 62.145 36.610 123.169 1.00 66.87 N
ATOM 24 C4 G A 65 60.970 36.086 123.577 1.00 67.22 C
ATOM 25 P C A 66 59.063 41.221 125.516 1.00 67.52 P
ATOM 26 OP1 C A 66 58.973 42.512 126.243 1.00 66.08 O
ATOM 27 OP2 C A 66 57.839 40.635 124.904 1.00 67.07 O
ATOM 28 O5' C A 66 60.151 41.366 124.366 1.00 66.94 O
TER
ATOM 1 O3' U B 111 49.930 34.335 114.052 1.00 62.65 O
ATOM 2 P C B 112 50.393 32.823 114.372 1.00 63.48 P
ATOM 3 OP1 C B 112 50.434 32.048 113.107 1.00 63.14 O
ATOM 4 OP2 C B 112 49.553 32.346 115.486 1.00 63.17 O
ATOM 5 O5' C B 112 51.892 32.942 114.905 1.00 61.98 O
ATOM 6 C5' C B 112 52.946 33.408 114.053 1.00 61.64 C
ATOM 7 C4' C B 112 54.221 32.634 114.307 1.00 62.81 C
ATOM 8 O4' C B 112 54.875 33.090 115.532 1.00 63.78 O
ATOM 9 C3' C B 112 54.083 31.120 114.431 1.00 63.75 C
ATOM 10 O3' C B 112 55.031 30.509 113.555 1.00 64.12 O
ATOM 11 C2' C B 112 54.391 30.884 115.916 1.00 64.11 C
ATOM 12 O2' C B 112 54.896 29.592 116.167 1.00 65.15 O
ATOM 13 C1' C B 112 55.435 31.975 116.180 1.00 63.88 C
ATOM 14 N1 C B 112 55.812 32.348 117.582 1.00 63.78 N
ATOM 15 C2 C B 112 57.046 33.033 117.804 1.00 63.26 C
ATOM 16 O2 C B 112 57.765 33.317 116.833 1.00 62.45 O
ATOM 17 N3 C B 112 57.414 33.352 119.071 1.00 62.02 N
ATOM 18 C4 C B 112 56.632 33.012 120.098 1.00 62.56 C
ATOM 19 N4 C B 112 57.056 33.312 121.324 1.00 62.20 N
ATOM 20 C5 C B 112 55.380 32.339 119.911 1.00 63.40 C
ATOM 21 C6 C B 112 55.012 32.031 118.650 1.00 63.87 C
ATOM 22 P G B 113 54.519 29.712 112.240 1.00 65.42 P
ATOM 23 OP1 G B 113 53.586 28.654 112.676 1.00 65.92 O
ATOM 24 OP2 G B 113 55.688 29.364 111.376 1.00 64.40 O
ATOM 25 O5' G B 113 53.627 30.751 111.446 1.00 63.43 O
TER
Atoms:
OP1: (55.592,37.404,128.613)
OP2: (55.335,38.329,126.239)
C3': (59.783,38.798,126.245)
C1': (61.091,36.870,125.951)
C5': (58.306,37.664,128.035)
O6: (59.623,34.480,120.677)
O4': (60.299,36.672,127.105)
C8: (59.261,35.501,124.824)
C2: (62.383,36.352,121.899)
C6: (60.310,35.100,121.488)
C5: (60.049,35.360,122.856)
C4: (60.970,36.086,123.577)
P: (55.857,37.285,127.163)
C4': (59.689,37.928,127.492)
C2': (61.127,38.372,125.678)
O2': (62.223,38.927,126.366)
N1: (61.525,35.649,121.087)
N2: (63.519,36.776,121.343)
N3: (62.145,36.610,123.169)
N7: (58.978,34.990,123.657)
N9: (60.459,36.175,124.838)
O5': (57.436,37.183,126.997)
O3': (59.739,40.187,126.550)
OP2: (55.335,38.329,126.239)
C3': (59.783,38.798,126.245)
C1': (61.091,36.870,125.951)
C5': (58.306,37.664,128.035)
O6: (59.623,34.480,120.677)
O4': (60.299,36.672,127.105)
C8: (59.261,35.501,124.824)
C2: (62.383,36.352,121.899)
C6: (60.310,35.100,121.488)
C5: (60.049,35.360,122.856)
C4: (60.970,36.086,123.577)
P: (55.857,37.285,127.163)
C4': (59.689,37.928,127.492)
C2': (61.127,38.372,125.678)
O2': (62.223,38.927,126.366)
N1: (61.525,35.649,121.087)
N2: (63.519,36.776,121.343)
N3: (62.145,36.610,123.169)
N7: (58.978,34.990,123.657)
N9: (60.459,36.175,124.838)
O5': (57.436,37.183,126.997)
O3': (59.739,40.187,126.550)
C2: (57.046,33.033,117.804)
OP1: (50.434,32.048,113.107)
OP2: (49.553,32.346,115.486)
C4: (56.632,33.012,120.098)
O5': (51.892,32.942,114.905)
C3': (54.083,31.120,114.431)
C1': (55.435,31.975,116.180)
O4': (54.875,33.090,115.532)
C5': (52.946,33.408,114.053)
P: (50.393,32.823,114.372)
O2: (57.765,33.317,116.833)
C4': (54.221,32.634,114.307)
C2': (54.391,30.884,115.916)
O2': (54.896,29.592,116.167)
N1: (55.812,32.348,117.582)
N3: (57.414,33.352,119.071)
N4: (57.056,33.312,121.324)
C6: (55.012,32.031,118.650)
C5: (55.380,32.339,119.911)
O3': (55.031,30.509,113.555)
OP1: (50.434,32.048,113.107)
OP2: (49.553,32.346,115.486)
C4: (56.632,33.012,120.098)
O5': (51.892,32.942,114.905)
C3': (54.083,31.120,114.431)
C1': (55.435,31.975,116.180)
O4': (54.875,33.090,115.532)
C5': (52.946,33.408,114.053)
P: (50.393,32.823,114.372)
O2: (57.765,33.317,116.833)
C4': (54.221,32.634,114.307)
C2': (54.391,30.884,115.916)
O2': (54.896,29.592,116.167)
N1: (55.812,32.348,117.582)
N3: (57.414,33.352,119.071)
N4: (57.056,33.312,121.324)
C6: (55.012,32.031,118.650)
C5: (55.380,32.339,119.911)
O3': (55.031,30.509,113.555)
Image (generated by PyMOL):