Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VC6:B60:B40
Extra
PDB:
ATOM 1 O3' U A 59 38.960 68.608 65.524 1.00 72.11 O
ATOM 2 P G A 60 39.071 70.123 66.043 1.00 74.60 P
ATOM 3 OP1 G A 60 39.188 71.007 64.847 1.00 76.04 O
ATOM 4 OP2 G A 60 40.141 70.140 67.085 1.00 73.54 O
ATOM 5 O5' G A 60 37.670 70.417 66.750 1.00 71.46 O
ATOM 6 C5' G A 60 36.454 70.392 66.015 1.00 67.38 C
ATOM 7 C4' G A 60 35.275 70.599 66.946 1.00 66.87 C
ATOM 8 O4' G A 60 35.197 69.515 67.914 1.00 65.29 O
ATOM 9 C3' G A 60 35.262 71.867 67.794 1.00 66.07 C
ATOM 10 O3' G A 60 34.743 72.978 67.070 1.00 67.40 O
ATOM 11 C2' G A 60 34.329 71.487 68.939 1.00 64.41 C
ATOM 12 O2' G A 60 32.969 71.625 68.566 1.00 61.49 O
ATOM 13 C1' G A 60 34.651 70.002 69.126 1.00 63.07 C
ATOM 14 N9 G A 60 35.595 69.724 70.199 1.00 60.52 N
ATOM 15 C8 G A 60 36.924 69.406 70.076 1.00 61.34 C
ATOM 16 N7 G A 60 37.496 69.137 71.220 1.00 61.15 N
ATOM 17 C5 G A 60 36.485 69.303 72.156 1.00 59.88 C
ATOM 18 C6 G A 60 36.501 69.136 73.561 1.00 58.95 C
ATOM 19 O6 G A 60 37.437 68.781 74.287 1.00 58.16 O
ATOM 20 N1 G A 60 35.264 69.420 74.120 1.00 58.94 N
ATOM 21 C2 G A 60 34.148 69.802 73.417 1.00 59.93 C
ATOM 22 N2 G A 60 33.038 70.027 74.135 1.00 60.37 N
ATOM 23 N3 G A 60 34.117 69.950 72.106 1.00 60.06 N
ATOM 24 C4 G A 60 35.313 69.686 71.542 1.00 60.09 C
ATOM 25 P G A 61 35.334 74.451 67.333 1.00 67.75 P
ATOM 26 OP1 G A 61 34.931 75.292 66.169 1.00 67.36 O
ATOM 27 OP2 G A 61 36.775 74.301 67.672 1.00 65.88 O
ATOM 28 O5' G A 61 34.518 74.976 68.599 1.00 67.28 O
TER
ATOM 1 O3' G B 39 47.574 69.471 76.905 1.00 84.78 O
ATOM 2 P C B 40 47.894 68.063 76.199 1.00 85.33 P
ATOM 3 OP1 C B 40 48.240 67.083 77.268 1.00 85.46 O
ATOM 4 OP2 C B 40 48.845 68.323 75.081 1.00 83.80 O
ATOM 5 O5' C B 40 46.509 67.631 75.550 1.00 82.59 O
ATOM 6 C5' C B 40 45.759 66.568 76.106 1.00 80.41 C
ATOM 7 C4' C B 40 44.721 67.112 77.046 1.00 78.99 C
ATOM 8 O4' C B 40 43.877 68.054 76.333 1.00 78.29 O
ATOM 9 C3' C B 40 43.797 66.065 77.646 1.00 78.78 C
ATOM 10 O3' C B 40 43.476 66.438 78.971 1.00 80.76 O
ATOM 11 C2' C B 40 42.541 66.180 76.797 1.00 76.90 C
ATOM 12 O2' C B 40 41.393 65.827 77.532 1.00 78.04 O
ATOM 13 C1' C B 40 42.527 67.669 76.459 1.00 74.73 C
ATOM 14 N1 C B 40 41.846 67.969 75.194 1.00 69.85 N
ATOM 15 C2 C B 40 40.476 68.229 75.218 1.00 68.59 C
ATOM 16 O2 C B 40 39.884 68.212 76.304 1.00 69.97 O
ATOM 17 N3 C B 40 39.831 68.492 74.061 1.00 66.27 N
ATOM 18 C4 C B 40 40.505 68.499 72.913 1.00 64.83 C
ATOM 19 N4 C B 40 39.827 68.752 71.794 1.00 61.91 N
ATOM 20 C5 C B 40 41.906 68.245 72.861 1.00 64.77 C
ATOM 21 C6 C B 40 42.531 67.988 74.015 1.00 66.60 C
ATOM 22 P A B 41 44.120 65.637 80.203 1.00 83.95 P
ATOM 23 OP1 A B 41 45.533 66.096 80.347 1.00 83.57 O
ATOM 24 OP2 A B 41 43.821 64.190 80.026 1.00 83.64 O
ATOM 25 O5' A B 41 43.270 66.142 81.452 1.00 82.67 O
TER
ATOM 2 P G A 60 39.071 70.123 66.043 1.00 74.60 P
ATOM 3 OP1 G A 60 39.188 71.007 64.847 1.00 76.04 O
ATOM 4 OP2 G A 60 40.141 70.140 67.085 1.00 73.54 O
ATOM 5 O5' G A 60 37.670 70.417 66.750 1.00 71.46 O
ATOM 6 C5' G A 60 36.454 70.392 66.015 1.00 67.38 C
ATOM 7 C4' G A 60 35.275 70.599 66.946 1.00 66.87 C
ATOM 8 O4' G A 60 35.197 69.515 67.914 1.00 65.29 O
ATOM 9 C3' G A 60 35.262 71.867 67.794 1.00 66.07 C
ATOM 10 O3' G A 60 34.743 72.978 67.070 1.00 67.40 O
ATOM 11 C2' G A 60 34.329 71.487 68.939 1.00 64.41 C
ATOM 12 O2' G A 60 32.969 71.625 68.566 1.00 61.49 O
ATOM 13 C1' G A 60 34.651 70.002 69.126 1.00 63.07 C
ATOM 14 N9 G A 60 35.595 69.724 70.199 1.00 60.52 N
ATOM 15 C8 G A 60 36.924 69.406 70.076 1.00 61.34 C
ATOM 16 N7 G A 60 37.496 69.137 71.220 1.00 61.15 N
ATOM 17 C5 G A 60 36.485 69.303 72.156 1.00 59.88 C
ATOM 18 C6 G A 60 36.501 69.136 73.561 1.00 58.95 C
ATOM 19 O6 G A 60 37.437 68.781 74.287 1.00 58.16 O
ATOM 20 N1 G A 60 35.264 69.420 74.120 1.00 58.94 N
ATOM 21 C2 G A 60 34.148 69.802 73.417 1.00 59.93 C
ATOM 22 N2 G A 60 33.038 70.027 74.135 1.00 60.37 N
ATOM 23 N3 G A 60 34.117 69.950 72.106 1.00 60.06 N
ATOM 24 C4 G A 60 35.313 69.686 71.542 1.00 60.09 C
ATOM 25 P G A 61 35.334 74.451 67.333 1.00 67.75 P
ATOM 26 OP1 G A 61 34.931 75.292 66.169 1.00 67.36 O
ATOM 27 OP2 G A 61 36.775 74.301 67.672 1.00 65.88 O
ATOM 28 O5' G A 61 34.518 74.976 68.599 1.00 67.28 O
TER
ATOM 1 O3' G B 39 47.574 69.471 76.905 1.00 84.78 O
ATOM 2 P C B 40 47.894 68.063 76.199 1.00 85.33 P
ATOM 3 OP1 C B 40 48.240 67.083 77.268 1.00 85.46 O
ATOM 4 OP2 C B 40 48.845 68.323 75.081 1.00 83.80 O
ATOM 5 O5' C B 40 46.509 67.631 75.550 1.00 82.59 O
ATOM 6 C5' C B 40 45.759 66.568 76.106 1.00 80.41 C
ATOM 7 C4' C B 40 44.721 67.112 77.046 1.00 78.99 C
ATOM 8 O4' C B 40 43.877 68.054 76.333 1.00 78.29 O
ATOM 9 C3' C B 40 43.797 66.065 77.646 1.00 78.78 C
ATOM 10 O3' C B 40 43.476 66.438 78.971 1.00 80.76 O
ATOM 11 C2' C B 40 42.541 66.180 76.797 1.00 76.90 C
ATOM 12 O2' C B 40 41.393 65.827 77.532 1.00 78.04 O
ATOM 13 C1' C B 40 42.527 67.669 76.459 1.00 74.73 C
ATOM 14 N1 C B 40 41.846 67.969 75.194 1.00 69.85 N
ATOM 15 C2 C B 40 40.476 68.229 75.218 1.00 68.59 C
ATOM 16 O2 C B 40 39.884 68.212 76.304 1.00 69.97 O
ATOM 17 N3 C B 40 39.831 68.492 74.061 1.00 66.27 N
ATOM 18 C4 C B 40 40.505 68.499 72.913 1.00 64.83 C
ATOM 19 N4 C B 40 39.827 68.752 71.794 1.00 61.91 N
ATOM 20 C5 C B 40 41.906 68.245 72.861 1.00 64.77 C
ATOM 21 C6 C B 40 42.531 67.988 74.015 1.00 66.60 C
ATOM 22 P A B 41 44.120 65.637 80.203 1.00 83.95 P
ATOM 23 OP1 A B 41 45.533 66.096 80.347 1.00 83.57 O
ATOM 24 OP2 A B 41 43.821 64.190 80.026 1.00 83.64 O
ATOM 25 O5' A B 41 43.270 66.142 81.452 1.00 82.67 O
TER
Atoms:
OP1: (39.188,71.007,64.847)
OP2: (40.141,70.140,67.085)
C3': (35.262,71.867,67.794)
C1': (34.651,70.002,69.126)
C5': (36.454,70.392,66.015)
O6: (37.437,68.781,74.287)
O4': (35.197,69.515,67.914)
C8: (36.924,69.406,70.076)
C2: (34.148,69.802,73.417)
C6: (36.501,69.136,73.561)
C5: (36.485,69.303,72.156)
C4: (35.313,69.686,71.542)
P: (39.071,70.123,66.043)
C4': (35.275,70.599,66.946)
C2': (34.329,71.487,68.939)
O2': (32.969,71.625,68.566)
N1: (35.264,69.420,74.120)
N2: (33.038,70.027,74.135)
N3: (34.117,69.950,72.106)
N7: (37.496,69.137,71.220)
N9: (35.595,69.724,70.199)
O5': (37.670,70.417,66.750)
O3': (34.743,72.978,67.070)
OP2: (40.141,70.140,67.085)
C3': (35.262,71.867,67.794)
C1': (34.651,70.002,69.126)
C5': (36.454,70.392,66.015)
O6: (37.437,68.781,74.287)
O4': (35.197,69.515,67.914)
C8: (36.924,69.406,70.076)
C2: (34.148,69.802,73.417)
C6: (36.501,69.136,73.561)
C5: (36.485,69.303,72.156)
C4: (35.313,69.686,71.542)
P: (39.071,70.123,66.043)
C4': (35.275,70.599,66.946)
C2': (34.329,71.487,68.939)
O2': (32.969,71.625,68.566)
N1: (35.264,69.420,74.120)
N2: (33.038,70.027,74.135)
N3: (34.117,69.950,72.106)
N7: (37.496,69.137,71.220)
N9: (35.595,69.724,70.199)
O5': (37.670,70.417,66.750)
O3': (34.743,72.978,67.070)
C2: (40.476,68.229,75.218)
OP1: (48.240,67.083,77.268)
OP2: (48.845,68.323,75.081)
C4: (40.505,68.499,72.913)
O5': (46.509,67.631,75.550)
C3': (43.797,66.065,77.646)
C1': (42.527,67.669,76.459)
O4': (43.877,68.054,76.333)
C5': (45.759,66.568,76.106)
P: (47.894,68.063,76.199)
O2: (39.884,68.212,76.304)
C4': (44.721,67.112,77.046)
C2': (42.541,66.180,76.797)
O2': (41.393,65.827,77.532)
N1: (41.846,67.969,75.194)
N3: (39.831,68.492,74.061)
N4: (39.827,68.752,71.794)
C6: (42.531,67.988,74.015)
C5: (41.906,68.245,72.861)
O3': (43.476,66.438,78.971)
OP1: (48.240,67.083,77.268)
OP2: (48.845,68.323,75.081)
C4: (40.505,68.499,72.913)
O5': (46.509,67.631,75.550)
C3': (43.797,66.065,77.646)
C1': (42.527,67.669,76.459)
O4': (43.877,68.054,76.333)
C5': (45.759,66.568,76.106)
P: (47.894,68.063,76.199)
O2: (39.884,68.212,76.304)
C4': (44.721,67.112,77.046)
C2': (42.541,66.180,76.797)
O2': (41.393,65.827,77.532)
N1: (41.846,67.969,75.194)
N3: (39.831,68.492,74.061)
N4: (39.827,68.752,71.794)
C6: (42.531,67.988,74.015)
C5: (41.906,68.245,72.861)
O3': (43.476,66.438,78.971)
Image (generated by PyMOL):