Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:965:9112
Extra
PDB:
ATOM 1 O3' A A 64 55.083 34.900 126.278 1.00 71.87 O
ATOM 2 P G A 65 55.534 36.396 126.701 1.00 72.22 P
ATOM 3 OP1 G A 65 55.312 36.507 128.168 1.00 71.00 O
ATOM 4 OP2 G A 65 54.903 37.396 125.798 1.00 72.99 O
ATOM 5 O5' G A 65 57.114 36.406 126.479 1.00 67.63 O
ATOM 6 C5' G A 65 57.992 36.938 127.493 1.00 65.24 C
ATOM 7 C4' G A 65 59.385 37.151 126.946 1.00 63.26 C
ATOM 8 O4' G A 65 59.936 35.879 126.515 1.00 62.84 O
ATOM 9 C3' G A 65 59.507 38.036 125.716 1.00 63.30 C
ATOM 10 O3' G A 65 59.479 39.422 126.040 1.00 63.36 O
ATOM 11 C2' G A 65 60.845 37.594 125.140 1.00 61.69 C
ATOM 12 O2' G A 65 61.948 38.151 125.828 1.00 59.12 O
ATOM 13 C1' G A 65 60.792 36.085 125.398 1.00 61.60 C
ATOM 14 N9 G A 65 60.267 35.325 124.263 1.00 59.80 N
ATOM 15 C8 G A 65 59.102 34.597 124.215 1.00 58.63 C
ATOM 16 N7 G A 65 58.898 34.035 123.054 1.00 58.67 N
ATOM 17 C5 G A 65 59.992 34.414 122.290 1.00 57.66 C
ATOM 18 C6 G A 65 60.321 34.114 120.941 1.00 56.93 C
ATOM 19 O6 G A 65 59.689 33.436 120.126 1.00 56.22 O
ATOM 20 N1 G A 65 61.525 34.698 120.567 1.00 57.45 N
ATOM 21 C2 G A 65 62.313 35.475 121.384 1.00 58.17 C
ATOM 22 N2 G A 65 63.447 35.949 120.843 1.00 57.16 N
ATOM 23 N3 G A 65 62.014 35.766 122.639 1.00 57.32 N
ATOM 24 C4 G A 65 60.849 35.206 123.023 1.00 57.92 C
ATOM 25 P C A 66 58.815 40.467 125.011 1.00 64.68 P
ATOM 26 OP1 C A 66 58.722 41.784 125.703 1.00 63.74 O
ATOM 27 OP2 C A 66 57.584 39.856 124.436 1.00 63.98 O
ATOM 28 O5' C A 66 59.906 40.586 123.855 1.00 62.36 O
TER
ATOM 1 O3' U B 111 49.727 33.404 113.653 1.00 53.20 O
ATOM 2 P C B 112 50.153 31.925 114.098 1.00 54.41 P
ATOM 3 OP1 C B 112 50.113 31.078 112.880 1.00 52.91 O
ATOM 4 OP2 C B 112 49.341 31.546 115.285 1.00 54.96 O
ATOM 5 O5' C B 112 51.672 32.075 114.556 1.00 52.06 O
ATOM 6 C5' C B 112 52.656 32.571 113.638 1.00 52.47 C
ATOM 7 C4' C B 112 53.918 31.743 113.700 1.00 51.65 C
ATOM 8 O4' C B 112 54.738 32.167 114.822 1.00 52.79 O
ATOM 9 C3' C B 112 53.743 30.233 113.843 1.00 51.89 C
ATOM 10 O3' C B 112 54.683 29.586 113.008 1.00 51.03 O
ATOM 11 C2' C B 112 54.140 29.988 115.299 1.00 52.68 C
ATOM 12 O2' C B 112 54.634 28.682 115.531 1.00 52.92 O
ATOM 13 C1' C B 112 55.247 31.026 115.469 1.00 51.95 C
ATOM 14 N1 C B 112 55.640 31.391 116.845 1.00 51.47 N
ATOM 15 C2 C B 112 56.939 31.896 117.064 1.00 50.91 C
ATOM 16 O2 C B 112 57.704 32.049 116.095 1.00 48.27 O
ATOM 17 N3 C B 112 57.323 32.204 118.328 1.00 51.41 N
ATOM 18 C4 C B 112 56.472 32.035 119.347 1.00 51.30 C
ATOM 19 N4 C B 112 56.896 32.345 120.574 1.00 50.16 N
ATOM 20 C5 C B 112 55.148 31.539 119.151 1.00 51.01 C
ATOM 21 C6 C B 112 54.776 31.237 117.897 1.00 51.89 C
ATOM 22 P G B 113 54.173 28.792 111.716 1.00 53.71 P
ATOM 23 OP1 G B 113 53.129 27.826 112.155 1.00 53.82 O
ATOM 24 OP2 G B 113 55.366 28.306 110.979 1.00 52.49 O
ATOM 25 O5' G B 113 53.464 29.917 110.843 1.00 53.21 O
TER
ATOM 2 P G A 65 55.534 36.396 126.701 1.00 72.22 P
ATOM 3 OP1 G A 65 55.312 36.507 128.168 1.00 71.00 O
ATOM 4 OP2 G A 65 54.903 37.396 125.798 1.00 72.99 O
ATOM 5 O5' G A 65 57.114 36.406 126.479 1.00 67.63 O
ATOM 6 C5' G A 65 57.992 36.938 127.493 1.00 65.24 C
ATOM 7 C4' G A 65 59.385 37.151 126.946 1.00 63.26 C
ATOM 8 O4' G A 65 59.936 35.879 126.515 1.00 62.84 O
ATOM 9 C3' G A 65 59.507 38.036 125.716 1.00 63.30 C
ATOM 10 O3' G A 65 59.479 39.422 126.040 1.00 63.36 O
ATOM 11 C2' G A 65 60.845 37.594 125.140 1.00 61.69 C
ATOM 12 O2' G A 65 61.948 38.151 125.828 1.00 59.12 O
ATOM 13 C1' G A 65 60.792 36.085 125.398 1.00 61.60 C
ATOM 14 N9 G A 65 60.267 35.325 124.263 1.00 59.80 N
ATOM 15 C8 G A 65 59.102 34.597 124.215 1.00 58.63 C
ATOM 16 N7 G A 65 58.898 34.035 123.054 1.00 58.67 N
ATOM 17 C5 G A 65 59.992 34.414 122.290 1.00 57.66 C
ATOM 18 C6 G A 65 60.321 34.114 120.941 1.00 56.93 C
ATOM 19 O6 G A 65 59.689 33.436 120.126 1.00 56.22 O
ATOM 20 N1 G A 65 61.525 34.698 120.567 1.00 57.45 N
ATOM 21 C2 G A 65 62.313 35.475 121.384 1.00 58.17 C
ATOM 22 N2 G A 65 63.447 35.949 120.843 1.00 57.16 N
ATOM 23 N3 G A 65 62.014 35.766 122.639 1.00 57.32 N
ATOM 24 C4 G A 65 60.849 35.206 123.023 1.00 57.92 C
ATOM 25 P C A 66 58.815 40.467 125.011 1.00 64.68 P
ATOM 26 OP1 C A 66 58.722 41.784 125.703 1.00 63.74 O
ATOM 27 OP2 C A 66 57.584 39.856 124.436 1.00 63.98 O
ATOM 28 O5' C A 66 59.906 40.586 123.855 1.00 62.36 O
TER
ATOM 1 O3' U B 111 49.727 33.404 113.653 1.00 53.20 O
ATOM 2 P C B 112 50.153 31.925 114.098 1.00 54.41 P
ATOM 3 OP1 C B 112 50.113 31.078 112.880 1.00 52.91 O
ATOM 4 OP2 C B 112 49.341 31.546 115.285 1.00 54.96 O
ATOM 5 O5' C B 112 51.672 32.075 114.556 1.00 52.06 O
ATOM 6 C5' C B 112 52.656 32.571 113.638 1.00 52.47 C
ATOM 7 C4' C B 112 53.918 31.743 113.700 1.00 51.65 C
ATOM 8 O4' C B 112 54.738 32.167 114.822 1.00 52.79 O
ATOM 9 C3' C B 112 53.743 30.233 113.843 1.00 51.89 C
ATOM 10 O3' C B 112 54.683 29.586 113.008 1.00 51.03 O
ATOM 11 C2' C B 112 54.140 29.988 115.299 1.00 52.68 C
ATOM 12 O2' C B 112 54.634 28.682 115.531 1.00 52.92 O
ATOM 13 C1' C B 112 55.247 31.026 115.469 1.00 51.95 C
ATOM 14 N1 C B 112 55.640 31.391 116.845 1.00 51.47 N
ATOM 15 C2 C B 112 56.939 31.896 117.064 1.00 50.91 C
ATOM 16 O2 C B 112 57.704 32.049 116.095 1.00 48.27 O
ATOM 17 N3 C B 112 57.323 32.204 118.328 1.00 51.41 N
ATOM 18 C4 C B 112 56.472 32.035 119.347 1.00 51.30 C
ATOM 19 N4 C B 112 56.896 32.345 120.574 1.00 50.16 N
ATOM 20 C5 C B 112 55.148 31.539 119.151 1.00 51.01 C
ATOM 21 C6 C B 112 54.776 31.237 117.897 1.00 51.89 C
ATOM 22 P G B 113 54.173 28.792 111.716 1.00 53.71 P
ATOM 23 OP1 G B 113 53.129 27.826 112.155 1.00 53.82 O
ATOM 24 OP2 G B 113 55.366 28.306 110.979 1.00 52.49 O
ATOM 25 O5' G B 113 53.464 29.917 110.843 1.00 53.21 O
TER
Atoms:
OP1: (55.312,36.507,128.168)
OP2: (54.903,37.396,125.798)
C3': (59.507,38.036,125.716)
C1': (60.792,36.085,125.398)
C5': (57.992,36.938,127.493)
O6: (59.689,33.436,120.126)
O4': (59.936,35.879,126.515)
C8: (59.102,34.597,124.215)
C2: (62.313,35.475,121.384)
C6: (60.321,34.114,120.941)
C5: (59.992,34.414,122.290)
C4: (60.849,35.206,123.023)
P: (55.534,36.396,126.701)
C4': (59.385,37.151,126.946)
C2': (60.845,37.594,125.140)
O2': (61.948,38.151,125.828)
N1: (61.525,34.698,120.567)
N2: (63.447,35.949,120.843)
N3: (62.014,35.766,122.639)
N7: (58.898,34.035,123.054)
N9: (60.267,35.325,124.263)
O5': (57.114,36.406,126.479)
O3': (59.479,39.422,126.040)
OP2: (54.903,37.396,125.798)
C3': (59.507,38.036,125.716)
C1': (60.792,36.085,125.398)
C5': (57.992,36.938,127.493)
O6: (59.689,33.436,120.126)
O4': (59.936,35.879,126.515)
C8: (59.102,34.597,124.215)
C2: (62.313,35.475,121.384)
C6: (60.321,34.114,120.941)
C5: (59.992,34.414,122.290)
C4: (60.849,35.206,123.023)
P: (55.534,36.396,126.701)
C4': (59.385,37.151,126.946)
C2': (60.845,37.594,125.140)
O2': (61.948,38.151,125.828)
N1: (61.525,34.698,120.567)
N2: (63.447,35.949,120.843)
N3: (62.014,35.766,122.639)
N7: (58.898,34.035,123.054)
N9: (60.267,35.325,124.263)
O5': (57.114,36.406,126.479)
O3': (59.479,39.422,126.040)
C2: (56.939,31.896,117.064)
OP1: (50.113,31.078,112.880)
OP2: (49.341,31.546,115.285)
C4: (56.472,32.035,119.347)
O5': (51.672,32.075,114.556)
C3': (53.743,30.233,113.843)
C1': (55.247,31.026,115.469)
O4': (54.738,32.167,114.822)
C5': (52.656,32.571,113.638)
P: (50.153,31.925,114.098)
O2: (57.704,32.049,116.095)
C4': (53.918,31.743,113.700)
C2': (54.140,29.988,115.299)
O2': (54.634,28.682,115.531)
N1: (55.640,31.391,116.845)
N3: (57.323,32.204,118.328)
N4: (56.896,32.345,120.574)
C6: (54.776,31.237,117.897)
C5: (55.148,31.539,119.151)
O3': (54.683,29.586,113.008)
OP1: (50.113,31.078,112.880)
OP2: (49.341,31.546,115.285)
C4: (56.472,32.035,119.347)
O5': (51.672,32.075,114.556)
C3': (53.743,30.233,113.843)
C1': (55.247,31.026,115.469)
O4': (54.738,32.167,114.822)
C5': (52.656,32.571,113.638)
P: (50.153,31.925,114.098)
O2: (57.704,32.049,116.095)
C4': (53.918,31.743,113.700)
C2': (54.140,29.988,115.299)
O2': (54.634,28.682,115.531)
N1: (55.640,31.391,116.845)
N3: (57.323,32.204,118.328)
N4: (56.896,32.345,120.574)
C6: (54.776,31.237,117.897)
C5: (55.148,31.539,119.151)
O3': (54.683,29.586,113.008)
Image (generated by PyMOL):