Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:965:9112
Extra
PDB:
ATOM 1 O3' A A 64 55.109 35.436 126.378 1.00 78.42 O
ATOM 2 P G A 65 55.548 36.922 126.846 1.00 77.20 P
ATOM 3 OP1 G A 65 55.356 36.943 128.318 1.00 77.03 O
ATOM 4 OP2 G A 65 54.884 37.962 126.016 1.00 78.80 O
ATOM 5 O5' G A 65 57.123 36.969 126.593 1.00 73.53 O
ATOM 6 C5' G A 65 58.008 37.505 127.601 1.00 71.42 C
ATOM 7 C4' G A 65 59.398 37.712 127.045 1.00 69.99 C
ATOM 8 O4' G A 65 59.944 36.436 126.615 1.00 69.71 O
ATOM 9 C3' G A 65 59.508 38.594 125.812 1.00 69.53 C
ATOM 10 O3' G A 65 59.488 39.983 126.137 1.00 68.89 O
ATOM 11 C2' G A 65 60.835 38.139 125.217 1.00 68.61 C
ATOM 12 O2' G A 65 61.955 38.685 125.886 1.00 66.45 O
ATOM 13 C1' G A 65 60.774 36.631 125.478 1.00 68.58 C
ATOM 14 N9 G A 65 60.217 35.870 124.358 1.00 67.26 N
ATOM 15 C8 G A 65 59.049 35.145 124.338 1.00 66.93 C
ATOM 16 N7 G A 65 58.814 34.583 123.183 1.00 66.91 N
ATOM 17 C5 G A 65 59.890 34.958 122.392 1.00 65.87 C
ATOM 18 C6 G A 65 60.183 34.660 121.034 1.00 65.17 C
ATOM 19 O6 G A 65 59.530 33.981 120.233 1.00 63.39 O
ATOM 20 N1 G A 65 61.376 35.246 120.629 1.00 66.19 N
ATOM 21 C2 G A 65 62.189 36.017 121.426 1.00 67.36 C
ATOM 22 N2 G A 65 63.310 36.489 120.855 1.00 67.02 N
ATOM 23 N3 G A 65 61.926 36.303 122.690 1.00 66.64 N
ATOM 24 C4 G A 65 60.769 35.747 123.104 1.00 66.56 C
ATOM 25 P C A 66 58.753 41.026 125.149 1.00 68.84 P
ATOM 26 OP1 C A 66 58.653 42.324 125.865 1.00 67.93 O
ATOM 27 OP2 C A 66 57.518 40.397 124.599 1.00 66.76 O
ATOM 28 O5' C A 66 59.798 41.202 123.960 1.00 66.94 O
TER
ATOM 1 O3' U B 111 49.764 33.889 113.736 1.00 58.55 O
ATOM 2 P C B 112 50.226 32.414 114.156 1.00 58.24 P
ATOM 3 OP1 C B 112 50.118 31.549 112.956 1.00 57.76 O
ATOM 4 OP2 C B 112 49.499 32.041 115.398 1.00 60.38 O
ATOM 5 O5' C B 112 51.765 32.569 114.532 1.00 57.03 O
ATOM 6 C5' C B 112 52.713 32.995 113.551 1.00 56.85 C
ATOM 7 C4' C B 112 53.991 32.207 113.672 1.00 56.14 C
ATOM 8 O4' C B 112 54.766 32.686 114.805 1.00 57.65 O
ATOM 9 C3' C B 112 53.829 30.704 113.873 1.00 57.03 C
ATOM 10 O3' C B 112 54.765 30.028 113.061 1.00 57.50 O
ATOM 11 C2' C B 112 54.210 30.509 115.338 1.00 57.90 C
ATOM 12 O2' C B 112 54.742 29.226 115.618 1.00 58.70 O
ATOM 13 C1' C B 112 55.286 31.576 115.496 1.00 57.10 C
ATOM 14 N1 C B 112 55.618 31.973 116.879 1.00 56.93 N
ATOM 15 C2 C B 112 56.893 32.513 117.134 1.00 57.19 C
ATOM 16 O2 C B 112 57.676 32.691 116.182 1.00 56.95 O
ATOM 17 N3 C B 112 57.237 32.827 118.408 1.00 56.76 N
ATOM 18 C4 C B 112 56.368 32.628 119.404 1.00 55.41 C
ATOM 19 N4 C B 112 56.760 32.934 120.642 1.00 54.23 N
ATOM 20 C5 C B 112 55.059 32.103 119.173 1.00 55.49 C
ATOM 21 C6 C B 112 54.727 31.800 117.907 1.00 56.33 C
ATOM 22 P G B 113 54.253 29.269 111.752 1.00 59.14 P
ATOM 23 OP1 G B 113 53.338 28.176 112.174 1.00 58.75 O
ATOM 24 OP2 G B 113 55.438 28.961 110.907 1.00 59.24 O
ATOM 25 O5' G B 113 53.382 30.381 111.024 1.00 59.57 O
TER
ATOM 2 P G A 65 55.548 36.922 126.846 1.00 77.20 P
ATOM 3 OP1 G A 65 55.356 36.943 128.318 1.00 77.03 O
ATOM 4 OP2 G A 65 54.884 37.962 126.016 1.00 78.80 O
ATOM 5 O5' G A 65 57.123 36.969 126.593 1.00 73.53 O
ATOM 6 C5' G A 65 58.008 37.505 127.601 1.00 71.42 C
ATOM 7 C4' G A 65 59.398 37.712 127.045 1.00 69.99 C
ATOM 8 O4' G A 65 59.944 36.436 126.615 1.00 69.71 O
ATOM 9 C3' G A 65 59.508 38.594 125.812 1.00 69.53 C
ATOM 10 O3' G A 65 59.488 39.983 126.137 1.00 68.89 O
ATOM 11 C2' G A 65 60.835 38.139 125.217 1.00 68.61 C
ATOM 12 O2' G A 65 61.955 38.685 125.886 1.00 66.45 O
ATOM 13 C1' G A 65 60.774 36.631 125.478 1.00 68.58 C
ATOM 14 N9 G A 65 60.217 35.870 124.358 1.00 67.26 N
ATOM 15 C8 G A 65 59.049 35.145 124.338 1.00 66.93 C
ATOM 16 N7 G A 65 58.814 34.583 123.183 1.00 66.91 N
ATOM 17 C5 G A 65 59.890 34.958 122.392 1.00 65.87 C
ATOM 18 C6 G A 65 60.183 34.660 121.034 1.00 65.17 C
ATOM 19 O6 G A 65 59.530 33.981 120.233 1.00 63.39 O
ATOM 20 N1 G A 65 61.376 35.246 120.629 1.00 66.19 N
ATOM 21 C2 G A 65 62.189 36.017 121.426 1.00 67.36 C
ATOM 22 N2 G A 65 63.310 36.489 120.855 1.00 67.02 N
ATOM 23 N3 G A 65 61.926 36.303 122.690 1.00 66.64 N
ATOM 24 C4 G A 65 60.769 35.747 123.104 1.00 66.56 C
ATOM 25 P C A 66 58.753 41.026 125.149 1.00 68.84 P
ATOM 26 OP1 C A 66 58.653 42.324 125.865 1.00 67.93 O
ATOM 27 OP2 C A 66 57.518 40.397 124.599 1.00 66.76 O
ATOM 28 O5' C A 66 59.798 41.202 123.960 1.00 66.94 O
TER
ATOM 1 O3' U B 111 49.764 33.889 113.736 1.00 58.55 O
ATOM 2 P C B 112 50.226 32.414 114.156 1.00 58.24 P
ATOM 3 OP1 C B 112 50.118 31.549 112.956 1.00 57.76 O
ATOM 4 OP2 C B 112 49.499 32.041 115.398 1.00 60.38 O
ATOM 5 O5' C B 112 51.765 32.569 114.532 1.00 57.03 O
ATOM 6 C5' C B 112 52.713 32.995 113.551 1.00 56.85 C
ATOM 7 C4' C B 112 53.991 32.207 113.672 1.00 56.14 C
ATOM 8 O4' C B 112 54.766 32.686 114.805 1.00 57.65 O
ATOM 9 C3' C B 112 53.829 30.704 113.873 1.00 57.03 C
ATOM 10 O3' C B 112 54.765 30.028 113.061 1.00 57.50 O
ATOM 11 C2' C B 112 54.210 30.509 115.338 1.00 57.90 C
ATOM 12 O2' C B 112 54.742 29.226 115.618 1.00 58.70 O
ATOM 13 C1' C B 112 55.286 31.576 115.496 1.00 57.10 C
ATOM 14 N1 C B 112 55.618 31.973 116.879 1.00 56.93 N
ATOM 15 C2 C B 112 56.893 32.513 117.134 1.00 57.19 C
ATOM 16 O2 C B 112 57.676 32.691 116.182 1.00 56.95 O
ATOM 17 N3 C B 112 57.237 32.827 118.408 1.00 56.76 N
ATOM 18 C4 C B 112 56.368 32.628 119.404 1.00 55.41 C
ATOM 19 N4 C B 112 56.760 32.934 120.642 1.00 54.23 N
ATOM 20 C5 C B 112 55.059 32.103 119.173 1.00 55.49 C
ATOM 21 C6 C B 112 54.727 31.800 117.907 1.00 56.33 C
ATOM 22 P G B 113 54.253 29.269 111.752 1.00 59.14 P
ATOM 23 OP1 G B 113 53.338 28.176 112.174 1.00 58.75 O
ATOM 24 OP2 G B 113 55.438 28.961 110.907 1.00 59.24 O
ATOM 25 O5' G B 113 53.382 30.381 111.024 1.00 59.57 O
TER
Atoms:
OP1: (55.356,36.943,128.318)
OP2: (54.884,37.962,126.016)
C3': (59.508,38.594,125.812)
C1': (60.774,36.631,125.478)
C5': (58.008,37.505,127.601)
O6: (59.530,33.981,120.233)
O4': (59.944,36.436,126.615)
C8: (59.049,35.145,124.338)
C2: (62.189,36.017,121.426)
C6: (60.183,34.660,121.034)
C5: (59.890,34.958,122.392)
C4: (60.769,35.747,123.104)
P: (55.548,36.922,126.846)
C4': (59.398,37.712,127.045)
C2': (60.835,38.139,125.217)
O2': (61.955,38.685,125.886)
N1: (61.376,35.246,120.629)
N2: (63.310,36.489,120.855)
N3: (61.926,36.303,122.690)
N7: (58.814,34.583,123.183)
N9: (60.217,35.870,124.358)
O5': (57.123,36.969,126.593)
O3': (59.488,39.983,126.137)
OP2: (54.884,37.962,126.016)
C3': (59.508,38.594,125.812)
C1': (60.774,36.631,125.478)
C5': (58.008,37.505,127.601)
O6: (59.530,33.981,120.233)
O4': (59.944,36.436,126.615)
C8: (59.049,35.145,124.338)
C2: (62.189,36.017,121.426)
C6: (60.183,34.660,121.034)
C5: (59.890,34.958,122.392)
C4: (60.769,35.747,123.104)
P: (55.548,36.922,126.846)
C4': (59.398,37.712,127.045)
C2': (60.835,38.139,125.217)
O2': (61.955,38.685,125.886)
N1: (61.376,35.246,120.629)
N2: (63.310,36.489,120.855)
N3: (61.926,36.303,122.690)
N7: (58.814,34.583,123.183)
N9: (60.217,35.870,124.358)
O5': (57.123,36.969,126.593)
O3': (59.488,39.983,126.137)
C2: (56.893,32.513,117.134)
OP1: (50.118,31.549,112.956)
OP2: (49.499,32.041,115.398)
C4: (56.368,32.628,119.404)
O5': (51.765,32.569,114.532)
C3': (53.829,30.704,113.873)
C1': (55.286,31.576,115.496)
O4': (54.766,32.686,114.805)
C5': (52.713,32.995,113.551)
P: (50.226,32.414,114.156)
O2: (57.676,32.691,116.182)
C4': (53.991,32.207,113.672)
C2': (54.210,30.509,115.338)
O2': (54.742,29.226,115.618)
N1: (55.618,31.973,116.879)
N3: (57.237,32.827,118.408)
N4: (56.760,32.934,120.642)
C6: (54.727,31.800,117.907)
C5: (55.059,32.103,119.173)
O3': (54.765,30.028,113.061)
OP1: (50.118,31.549,112.956)
OP2: (49.499,32.041,115.398)
C4: (56.368,32.628,119.404)
O5': (51.765,32.569,114.532)
C3': (53.829,30.704,113.873)
C1': (55.286,31.576,115.496)
O4': (54.766,32.686,114.805)
C5': (52.713,32.995,113.551)
P: (50.226,32.414,114.156)
O2: (57.676,32.691,116.182)
C4': (53.991,32.207,113.672)
C2': (54.210,30.509,115.338)
O2': (54.742,29.226,115.618)
N1: (55.618,31.973,116.879)
N3: (57.237,32.827,118.408)
N4: (56.760,32.934,120.642)
C6: (54.727,31.800,117.907)
C5: (55.059,32.103,119.173)
O3': (54.765,30.028,113.061)
Image (generated by PyMOL):