Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:965:9112
Extra
PDB:
ATOM 1 O3' A A 64 55.060 35.593 126.273 1.00 72.52 O
ATOM 2 P G A 65 55.429 37.107 126.704 1.00 71.83 P
ATOM 3 OP1 G A 65 55.177 37.177 128.167 1.00 71.63 O
ATOM 4 OP2 G A 65 54.760 38.087 125.806 1.00 73.68 O
ATOM 5 O5' G A 65 57.009 37.199 126.507 1.00 68.48 O
ATOM 6 C5' G A 65 57.853 37.720 127.559 1.00 66.54 C
ATOM 7 C4' G A 65 59.269 37.914 127.065 1.00 65.66 C
ATOM 8 O4' G A 65 59.827 36.632 126.668 1.00 65.91 O
ATOM 9 C3' G A 65 59.426 38.784 125.830 1.00 65.18 C
ATOM 10 O3' G A 65 59.398 40.171 126.152 1.00 64.85 O
ATOM 11 C2' G A 65 60.763 38.313 125.274 1.00 64.59 C
ATOM 12 O2' G A 65 61.874 38.845 125.966 1.00 62.58 O
ATOM 13 C1' G A 65 60.679 36.808 125.545 1.00 64.97 C
ATOM 14 N9 G A 65 60.124 36.051 124.423 1.00 64.41 N
ATOM 15 C8 G A 65 58.952 35.334 124.402 1.00 64.02 C
ATOM 16 N7 G A 65 58.718 34.767 123.249 1.00 64.61 N
ATOM 17 C5 G A 65 59.799 35.133 122.459 1.00 63.38 C
ATOM 18 C6 G A 65 60.093 34.824 121.107 1.00 62.94 C
ATOM 19 O6 G A 65 59.437 34.146 120.310 1.00 61.88 O
ATOM 20 N1 G A 65 61.292 35.397 120.703 1.00 64.04 N
ATOM 21 C2 G A 65 62.109 36.166 121.499 1.00 65.49 C
ATOM 22 N2 G A 65 63.242 36.619 120.932 1.00 65.87 N
ATOM 23 N3 G A 65 61.841 36.466 122.758 1.00 64.55 N
ATOM 24 C4 G A 65 60.679 35.920 123.170 1.00 63.86 C
ATOM 25 P C A 66 58.659 41.207 125.162 1.00 63.91 P
ATOM 26 OP1 C A 66 58.546 42.503 125.878 1.00 62.90 O
ATOM 27 OP2 C A 66 57.432 40.569 124.602 1.00 62.10 O
ATOM 28 O5' C A 66 59.710 41.394 123.982 1.00 63.16 O
TER
ATOM 1 O3' U B 111 49.708 34.062 113.696 1.00 57.02 O
ATOM 2 P C B 112 50.126 32.571 114.102 1.00 56.53 P
ATOM 3 OP1 C B 112 50.029 31.754 112.870 1.00 56.67 O
ATOM 4 OP2 C B 112 49.348 32.183 115.305 1.00 58.36 O
ATOM 5 O5' C B 112 51.658 32.687 114.515 1.00 53.97 O
ATOM 6 C5' C B 112 52.623 33.186 113.583 1.00 52.95 C
ATOM 7 C4' C B 112 53.909 32.403 113.677 1.00 51.65 C
ATOM 8 O4' C B 112 54.703 32.862 114.805 1.00 52.82 O
ATOM 9 C3' C B 112 53.760 30.897 113.849 1.00 52.04 C
ATOM 10 O3' C B 112 54.720 30.254 113.039 1.00 52.52 O
ATOM 11 C2' C B 112 54.126 30.687 115.315 1.00 52.15 C
ATOM 12 O2' C B 112 54.642 29.399 115.588 1.00 53.48 O
ATOM 13 C1' C B 112 55.214 31.741 115.484 1.00 51.55 C
ATOM 14 N1 C B 112 55.578 32.124 116.865 1.00 50.34 N
ATOM 15 C2 C B 112 56.848 32.695 117.093 1.00 49.70 C
ATOM 16 O2 C B 112 57.609 32.893 116.126 1.00 47.44 O
ATOM 17 N3 C B 112 57.212 33.014 118.361 1.00 49.52 N
ATOM 18 C4 C B 112 56.373 32.785 119.376 1.00 47.88 C
ATOM 19 N4 C B 112 56.783 33.100 120.604 1.00 46.57 N
ATOM 20 C5 C B 112 55.076 32.222 119.174 1.00 47.94 C
ATOM 21 C6 C B 112 54.720 31.915 117.915 1.00 49.87 C
ATOM 22 P G B 113 54.240 29.480 111.724 1.00 55.95 P
ATOM 23 OP1 G B 113 53.250 28.444 112.122 1.00 56.10 O
ATOM 24 OP2 G B 113 55.450 29.089 110.949 1.00 55.72 O
ATOM 25 O5' G B 113 53.453 30.598 110.913 1.00 55.83 O
TER
ATOM 2 P G A 65 55.429 37.107 126.704 1.00 71.83 P
ATOM 3 OP1 G A 65 55.177 37.177 128.167 1.00 71.63 O
ATOM 4 OP2 G A 65 54.760 38.087 125.806 1.00 73.68 O
ATOM 5 O5' G A 65 57.009 37.199 126.507 1.00 68.48 O
ATOM 6 C5' G A 65 57.853 37.720 127.559 1.00 66.54 C
ATOM 7 C4' G A 65 59.269 37.914 127.065 1.00 65.66 C
ATOM 8 O4' G A 65 59.827 36.632 126.668 1.00 65.91 O
ATOM 9 C3' G A 65 59.426 38.784 125.830 1.00 65.18 C
ATOM 10 O3' G A 65 59.398 40.171 126.152 1.00 64.85 O
ATOM 11 C2' G A 65 60.763 38.313 125.274 1.00 64.59 C
ATOM 12 O2' G A 65 61.874 38.845 125.966 1.00 62.58 O
ATOM 13 C1' G A 65 60.679 36.808 125.545 1.00 64.97 C
ATOM 14 N9 G A 65 60.124 36.051 124.423 1.00 64.41 N
ATOM 15 C8 G A 65 58.952 35.334 124.402 1.00 64.02 C
ATOM 16 N7 G A 65 58.718 34.767 123.249 1.00 64.61 N
ATOM 17 C5 G A 65 59.799 35.133 122.459 1.00 63.38 C
ATOM 18 C6 G A 65 60.093 34.824 121.107 1.00 62.94 C
ATOM 19 O6 G A 65 59.437 34.146 120.310 1.00 61.88 O
ATOM 20 N1 G A 65 61.292 35.397 120.703 1.00 64.04 N
ATOM 21 C2 G A 65 62.109 36.166 121.499 1.00 65.49 C
ATOM 22 N2 G A 65 63.242 36.619 120.932 1.00 65.87 N
ATOM 23 N3 G A 65 61.841 36.466 122.758 1.00 64.55 N
ATOM 24 C4 G A 65 60.679 35.920 123.170 1.00 63.86 C
ATOM 25 P C A 66 58.659 41.207 125.162 1.00 63.91 P
ATOM 26 OP1 C A 66 58.546 42.503 125.878 1.00 62.90 O
ATOM 27 OP2 C A 66 57.432 40.569 124.602 1.00 62.10 O
ATOM 28 O5' C A 66 59.710 41.394 123.982 1.00 63.16 O
TER
ATOM 1 O3' U B 111 49.708 34.062 113.696 1.00 57.02 O
ATOM 2 P C B 112 50.126 32.571 114.102 1.00 56.53 P
ATOM 3 OP1 C B 112 50.029 31.754 112.870 1.00 56.67 O
ATOM 4 OP2 C B 112 49.348 32.183 115.305 1.00 58.36 O
ATOM 5 O5' C B 112 51.658 32.687 114.515 1.00 53.97 O
ATOM 6 C5' C B 112 52.623 33.186 113.583 1.00 52.95 C
ATOM 7 C4' C B 112 53.909 32.403 113.677 1.00 51.65 C
ATOM 8 O4' C B 112 54.703 32.862 114.805 1.00 52.82 O
ATOM 9 C3' C B 112 53.760 30.897 113.849 1.00 52.04 C
ATOM 10 O3' C B 112 54.720 30.254 113.039 1.00 52.52 O
ATOM 11 C2' C B 112 54.126 30.687 115.315 1.00 52.15 C
ATOM 12 O2' C B 112 54.642 29.399 115.588 1.00 53.48 O
ATOM 13 C1' C B 112 55.214 31.741 115.484 1.00 51.55 C
ATOM 14 N1 C B 112 55.578 32.124 116.865 1.00 50.34 N
ATOM 15 C2 C B 112 56.848 32.695 117.093 1.00 49.70 C
ATOM 16 O2 C B 112 57.609 32.893 116.126 1.00 47.44 O
ATOM 17 N3 C B 112 57.212 33.014 118.361 1.00 49.52 N
ATOM 18 C4 C B 112 56.373 32.785 119.376 1.00 47.88 C
ATOM 19 N4 C B 112 56.783 33.100 120.604 1.00 46.57 N
ATOM 20 C5 C B 112 55.076 32.222 119.174 1.00 47.94 C
ATOM 21 C6 C B 112 54.720 31.915 117.915 1.00 49.87 C
ATOM 22 P G B 113 54.240 29.480 111.724 1.00 55.95 P
ATOM 23 OP1 G B 113 53.250 28.444 112.122 1.00 56.10 O
ATOM 24 OP2 G B 113 55.450 29.089 110.949 1.00 55.72 O
ATOM 25 O5' G B 113 53.453 30.598 110.913 1.00 55.83 O
TER
Atoms:
OP1: (55.177,37.177,128.167)
OP2: (54.760,38.087,125.806)
C3': (59.426,38.784,125.830)
C1': (60.679,36.808,125.545)
C5': (57.853,37.720,127.559)
O6: (59.437,34.146,120.310)
O4': (59.827,36.632,126.668)
C8: (58.952,35.334,124.402)
C2: (62.109,36.166,121.499)
C6: (60.093,34.824,121.107)
C5: (59.799,35.133,122.459)
C4: (60.679,35.920,123.170)
P: (55.429,37.107,126.704)
C4': (59.269,37.914,127.065)
C2': (60.763,38.313,125.274)
O2': (61.874,38.845,125.966)
N1: (61.292,35.397,120.703)
N2: (63.242,36.619,120.932)
N3: (61.841,36.466,122.758)
N7: (58.718,34.767,123.249)
N9: (60.124,36.051,124.423)
O5': (57.009,37.199,126.507)
O3': (59.398,40.171,126.152)
OP2: (54.760,38.087,125.806)
C3': (59.426,38.784,125.830)
C1': (60.679,36.808,125.545)
C5': (57.853,37.720,127.559)
O6: (59.437,34.146,120.310)
O4': (59.827,36.632,126.668)
C8: (58.952,35.334,124.402)
C2: (62.109,36.166,121.499)
C6: (60.093,34.824,121.107)
C5: (59.799,35.133,122.459)
C4: (60.679,35.920,123.170)
P: (55.429,37.107,126.704)
C4': (59.269,37.914,127.065)
C2': (60.763,38.313,125.274)
O2': (61.874,38.845,125.966)
N1: (61.292,35.397,120.703)
N2: (63.242,36.619,120.932)
N3: (61.841,36.466,122.758)
N7: (58.718,34.767,123.249)
N9: (60.124,36.051,124.423)
O5': (57.009,37.199,126.507)
O3': (59.398,40.171,126.152)
C2: (56.848,32.695,117.093)
OP1: (50.029,31.754,112.870)
OP2: (49.348,32.183,115.305)
C4: (56.373,32.785,119.376)
O5': (51.658,32.687,114.515)
C3': (53.760,30.897,113.849)
C1': (55.214,31.741,115.484)
O4': (54.703,32.862,114.805)
C5': (52.623,33.186,113.583)
P: (50.126,32.571,114.102)
O2: (57.609,32.893,116.126)
C4': (53.909,32.403,113.677)
C2': (54.126,30.687,115.315)
O2': (54.642,29.399,115.588)
N1: (55.578,32.124,116.865)
N3: (57.212,33.014,118.361)
N4: (56.783,33.100,120.604)
C6: (54.720,31.915,117.915)
C5: (55.076,32.222,119.174)
O3': (54.720,30.254,113.039)
OP1: (50.029,31.754,112.870)
OP2: (49.348,32.183,115.305)
C4: (56.373,32.785,119.376)
O5': (51.658,32.687,114.515)
C3': (53.760,30.897,113.849)
C1': (55.214,31.741,115.484)
O4': (54.703,32.862,114.805)
C5': (52.623,33.186,113.583)
P: (50.126,32.571,114.102)
O2: (57.609,32.893,116.126)
C4': (53.909,32.403,113.677)
C2': (54.126,30.687,115.315)
O2': (54.642,29.399,115.588)
N1: (55.578,32.124,116.865)
N3: (57.212,33.014,118.361)
N4: (56.783,33.100,120.604)
C6: (54.720,31.915,117.915)
C5: (55.076,32.222,119.174)
O3': (54.720,30.254,113.039)
Image (generated by PyMOL):