Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:965:9112
Extra
PDB:
ATOM 1 O3' A A 64 55.306 35.616 126.663 1.00 79.23 O
ATOM 2 P G A 65 55.701 37.111 127.133 1.00 79.28 P
ATOM 3 OP1 G A 65 55.546 37.102 128.609 1.00 80.09 O
ATOM 4 OP2 G A 65 54.981 38.135 126.330 1.00 80.68 O
ATOM 5 O5' G A 65 57.264 37.230 126.855 1.00 76.14 O
ATOM 6 C5' G A 65 58.145 37.727 127.879 1.00 74.07 C
ATOM 7 C4' G A 65 59.546 37.876 127.348 1.00 73.09 C
ATOM 8 O4' G A 65 60.030 36.582 126.904 1.00 72.65 O
ATOM 9 C3' G A 65 59.705 38.763 126.125 1.00 72.57 C
ATOM 10 O3' G A 65 59.737 40.147 126.466 1.00 71.95 O
ATOM 11 C2' G A 65 61.020 38.260 125.543 1.00 72.10 C
ATOM 12 O2' G A 65 62.153 38.747 126.234 1.00 70.51 O
ATOM 13 C1' G A 65 60.890 36.753 125.785 1.00 71.62 C
ATOM 14 N9 G A 65 60.322 36.033 124.646 1.00 70.08 N
ATOM 15 C8 G A 65 59.134 35.346 124.600 1.00 69.01 C
ATOM 16 N7 G A 65 58.894 34.817 123.433 1.00 69.14 N
ATOM 17 C5 G A 65 59.989 35.176 122.660 1.00 68.82 C
ATOM 18 C6 G A 65 60.287 34.896 121.299 1.00 69.17 C
ATOM 19 O6 G A 65 59.622 34.257 120.479 1.00 68.94 O
ATOM 20 N1 G A 65 61.503 35.447 120.920 1.00 70.48 N
ATOM 21 C2 G A 65 62.333 36.171 121.740 1.00 71.76 C
ATOM 22 N2 G A 65 63.483 36.606 121.190 1.00 72.13 N
ATOM 23 N3 G A 65 62.062 36.445 123.006 1.00 71.03 N
ATOM 24 C4 G A 65 60.882 35.919 123.395 1.00 69.60 C
ATOM 25 P C A 66 59.050 41.225 125.487 1.00 71.05 P
ATOM 26 OP1 C A 66 59.008 42.522 126.219 1.00 69.46 O
ATOM 27 OP2 C A 66 57.787 40.642 124.950 1.00 70.01 O
ATOM 28 O5' C A 66 60.095 41.356 124.289 1.00 69.38 O
TER
ATOM 1 O3' U B 111 49.874 34.269 114.108 1.00 58.28 O
ATOM 2 P C B 112 50.354 32.784 114.472 1.00 59.91 P
ATOM 3 OP1 C B 112 50.337 31.978 113.229 1.00 59.20 O
ATOM 4 OP2 C B 112 49.591 32.323 115.657 1.00 58.98 O
ATOM 5 O5' C B 112 51.878 32.968 114.881 1.00 58.91 O
ATOM 6 C5' C B 112 52.828 33.379 113.903 1.00 60.05 C
ATOM 7 C4' C B 112 54.077 32.546 113.996 1.00 60.70 C
ATOM 8 O4' C B 112 54.872 32.990 115.127 1.00 62.13 O
ATOM 9 C3' C B 112 53.883 31.044 114.171 1.00 61.40 C
ATOM 10 O3' C B 112 54.851 30.369 113.387 1.00 64.37 O
ATOM 11 C2' C B 112 54.218 30.834 115.643 1.00 61.32 C
ATOM 12 O2' C B 112 54.724 29.544 115.914 1.00 62.23 O
ATOM 13 C1' C B 112 55.326 31.862 115.832 1.00 60.86 C
ATOM 14 N1 C B 112 55.648 32.253 117.217 1.00 60.23 N
ATOM 15 C2 C B 112 56.923 32.795 117.485 1.00 59.80 C
ATOM 16 O2 C B 112 57.727 32.953 116.549 1.00 57.45 O
ATOM 17 N3 C B 112 57.244 33.129 118.757 1.00 59.65 N
ATOM 18 C4 C B 112 56.359 32.942 119.740 1.00 59.46 C
ATOM 19 N4 C B 112 56.724 33.277 120.979 1.00 58.20 N
ATOM 20 C5 C B 112 55.059 32.403 119.496 1.00 59.22 C
ATOM 21 C6 C B 112 54.747 32.082 118.233 1.00 58.90 C
ATOM 22 P G B 113 54.390 29.603 112.056 1.00 66.53 P
ATOM 23 OP1 G B 113 53.709 28.336 112.447 1.00 66.06 O
ATOM 24 OP2 G B 113 55.561 29.559 111.130 1.00 66.83 O
ATOM 25 O5' G B 113 53.299 30.595 111.456 1.00 65.33 O
TER
ATOM 2 P G A 65 55.701 37.111 127.133 1.00 79.28 P
ATOM 3 OP1 G A 65 55.546 37.102 128.609 1.00 80.09 O
ATOM 4 OP2 G A 65 54.981 38.135 126.330 1.00 80.68 O
ATOM 5 O5' G A 65 57.264 37.230 126.855 1.00 76.14 O
ATOM 6 C5' G A 65 58.145 37.727 127.879 1.00 74.07 C
ATOM 7 C4' G A 65 59.546 37.876 127.348 1.00 73.09 C
ATOM 8 O4' G A 65 60.030 36.582 126.904 1.00 72.65 O
ATOM 9 C3' G A 65 59.705 38.763 126.125 1.00 72.57 C
ATOM 10 O3' G A 65 59.737 40.147 126.466 1.00 71.95 O
ATOM 11 C2' G A 65 61.020 38.260 125.543 1.00 72.10 C
ATOM 12 O2' G A 65 62.153 38.747 126.234 1.00 70.51 O
ATOM 13 C1' G A 65 60.890 36.753 125.785 1.00 71.62 C
ATOM 14 N9 G A 65 60.322 36.033 124.646 1.00 70.08 N
ATOM 15 C8 G A 65 59.134 35.346 124.600 1.00 69.01 C
ATOM 16 N7 G A 65 58.894 34.817 123.433 1.00 69.14 N
ATOM 17 C5 G A 65 59.989 35.176 122.660 1.00 68.82 C
ATOM 18 C6 G A 65 60.287 34.896 121.299 1.00 69.17 C
ATOM 19 O6 G A 65 59.622 34.257 120.479 1.00 68.94 O
ATOM 20 N1 G A 65 61.503 35.447 120.920 1.00 70.48 N
ATOM 21 C2 G A 65 62.333 36.171 121.740 1.00 71.76 C
ATOM 22 N2 G A 65 63.483 36.606 121.190 1.00 72.13 N
ATOM 23 N3 G A 65 62.062 36.445 123.006 1.00 71.03 N
ATOM 24 C4 G A 65 60.882 35.919 123.395 1.00 69.60 C
ATOM 25 P C A 66 59.050 41.225 125.487 1.00 71.05 P
ATOM 26 OP1 C A 66 59.008 42.522 126.219 1.00 69.46 O
ATOM 27 OP2 C A 66 57.787 40.642 124.950 1.00 70.01 O
ATOM 28 O5' C A 66 60.095 41.356 124.289 1.00 69.38 O
TER
ATOM 1 O3' U B 111 49.874 34.269 114.108 1.00 58.28 O
ATOM 2 P C B 112 50.354 32.784 114.472 1.00 59.91 P
ATOM 3 OP1 C B 112 50.337 31.978 113.229 1.00 59.20 O
ATOM 4 OP2 C B 112 49.591 32.323 115.657 1.00 58.98 O
ATOM 5 O5' C B 112 51.878 32.968 114.881 1.00 58.91 O
ATOM 6 C5' C B 112 52.828 33.379 113.903 1.00 60.05 C
ATOM 7 C4' C B 112 54.077 32.546 113.996 1.00 60.70 C
ATOM 8 O4' C B 112 54.872 32.990 115.127 1.00 62.13 O
ATOM 9 C3' C B 112 53.883 31.044 114.171 1.00 61.40 C
ATOM 10 O3' C B 112 54.851 30.369 113.387 1.00 64.37 O
ATOM 11 C2' C B 112 54.218 30.834 115.643 1.00 61.32 C
ATOM 12 O2' C B 112 54.724 29.544 115.914 1.00 62.23 O
ATOM 13 C1' C B 112 55.326 31.862 115.832 1.00 60.86 C
ATOM 14 N1 C B 112 55.648 32.253 117.217 1.00 60.23 N
ATOM 15 C2 C B 112 56.923 32.795 117.485 1.00 59.80 C
ATOM 16 O2 C B 112 57.727 32.953 116.549 1.00 57.45 O
ATOM 17 N3 C B 112 57.244 33.129 118.757 1.00 59.65 N
ATOM 18 C4 C B 112 56.359 32.942 119.740 1.00 59.46 C
ATOM 19 N4 C B 112 56.724 33.277 120.979 1.00 58.20 N
ATOM 20 C5 C B 112 55.059 32.403 119.496 1.00 59.22 C
ATOM 21 C6 C B 112 54.747 32.082 118.233 1.00 58.90 C
ATOM 22 P G B 113 54.390 29.603 112.056 1.00 66.53 P
ATOM 23 OP1 G B 113 53.709 28.336 112.447 1.00 66.06 O
ATOM 24 OP2 G B 113 55.561 29.559 111.130 1.00 66.83 O
ATOM 25 O5' G B 113 53.299 30.595 111.456 1.00 65.33 O
TER
Atoms:
OP1: (55.546,37.102,128.609)
OP2: (54.981,38.135,126.330)
C3': (59.705,38.763,126.125)
C1': (60.890,36.753,125.785)
C5': (58.145,37.727,127.879)
O6: (59.622,34.257,120.479)
O4': (60.030,36.582,126.904)
C8: (59.134,35.346,124.600)
C2: (62.333,36.171,121.740)
C6: (60.287,34.896,121.299)
C5: (59.989,35.176,122.660)
C4: (60.882,35.919,123.395)
P: (55.701,37.111,127.133)
C4': (59.546,37.876,127.348)
C2': (61.020,38.260,125.543)
O2': (62.153,38.747,126.234)
N1: (61.503,35.447,120.920)
N2: (63.483,36.606,121.190)
N3: (62.062,36.445,123.006)
N7: (58.894,34.817,123.433)
N9: (60.322,36.033,124.646)
O5': (57.264,37.230,126.855)
O3': (59.737,40.147,126.466)
OP2: (54.981,38.135,126.330)
C3': (59.705,38.763,126.125)
C1': (60.890,36.753,125.785)
C5': (58.145,37.727,127.879)
O6: (59.622,34.257,120.479)
O4': (60.030,36.582,126.904)
C8: (59.134,35.346,124.600)
C2: (62.333,36.171,121.740)
C6: (60.287,34.896,121.299)
C5: (59.989,35.176,122.660)
C4: (60.882,35.919,123.395)
P: (55.701,37.111,127.133)
C4': (59.546,37.876,127.348)
C2': (61.020,38.260,125.543)
O2': (62.153,38.747,126.234)
N1: (61.503,35.447,120.920)
N2: (63.483,36.606,121.190)
N3: (62.062,36.445,123.006)
N7: (58.894,34.817,123.433)
N9: (60.322,36.033,124.646)
O5': (57.264,37.230,126.855)
O3': (59.737,40.147,126.466)
C2: (56.923,32.795,117.485)
OP1: (50.337,31.978,113.229)
OP2: (49.591,32.323,115.657)
C4: (56.359,32.942,119.740)
O5': (51.878,32.968,114.881)
C3': (53.883,31.044,114.171)
C1': (55.326,31.862,115.832)
O4': (54.872,32.990,115.127)
C5': (52.828,33.379,113.903)
P: (50.354,32.784,114.472)
O2: (57.727,32.953,116.549)
C4': (54.077,32.546,113.996)
C2': (54.218,30.834,115.643)
O2': (54.724,29.544,115.914)
N1: (55.648,32.253,117.217)
N3: (57.244,33.129,118.757)
N4: (56.724,33.277,120.979)
C6: (54.747,32.082,118.233)
C5: (55.059,32.403,119.496)
O3': (54.851,30.369,113.387)
OP1: (50.337,31.978,113.229)
OP2: (49.591,32.323,115.657)
C4: (56.359,32.942,119.740)
O5': (51.878,32.968,114.881)
C3': (53.883,31.044,114.171)
C1': (55.326,31.862,115.832)
O4': (54.872,32.990,115.127)
C5': (52.828,33.379,113.903)
P: (50.354,32.784,114.472)
O2: (57.727,32.953,116.549)
C4': (54.077,32.546,113.996)
C2': (54.218,30.834,115.643)
O2': (54.724,29.544,115.914)
N1: (55.648,32.253,117.217)
N3: (57.244,33.129,118.757)
N4: (56.724,33.277,120.979)
C6: (54.747,32.082,118.233)
C5: (55.059,32.403,119.496)
O3': (54.851,30.369,113.387)
Image (generated by PyMOL):