ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNK:B64:B106

Extra

PDB:
ATOM 1 O3' C A 63 -20.905-127.892 145.599 1.00123.49 O
ATOM 2 P A A 64 -19.401-127.785 145.044 1.00126.53 P
ATOM 3 OP1 A A 64 -19.255-126.451 144.414 1.00127.19 O
ATOM 4 OP2 A A 64 -19.164-129.012 144.236 1.00120.92 O
ATOM 5 O5' A A 64 -18.459-127.885 146.335 1.00121.37 O
ATOM 6 C5' A A 64 -18.282-126.796 147.255 1.00124.11 C
ATOM 7 C4' A A 64 -16.817-126.648 147.613 1.00123.18 C
ATOM 8 O4' A A 64 -16.245-127.979 147.581 1.00119.80 O
ATOM 9 C3' A A 64 -15.986-125.797 146.655 1.00122.56 C
ATOM 10 O3' A A 64 -16.051-124.410 147.096 1.00125.08 O
ATOM 11 C2' A A 64 -14.644-126.538 146.572 1.00116.85 C
ATOM 12 O2' A A 64 -13.717-126.212 147.583 1.00122.38 O
ATOM 13 C1' A A 64 -15.075-127.990 146.796 1.00118.36 C
ATOM 14 N9 A A 64 -15.365-128.833 145.635 1.00115.00 N
ATOM 15 C8 A A 64 -16.083-128.530 144.504 1.00116.56 C
ATOM 16 N7 A A 64 -16.304-129.564 143.726 1.00117.74 N
ATOM 17 C5 A A 64 -15.658-130.614 144.368 1.00119.09 C
ATOM 18 C6 A A 64 -15.544-131.992 144.071 1.00119.61 C
ATOM 19 N6 A A 64 -16.137-132.579 143.019 1.00113.92 N
ATOM 20 N1 A A 64 -14.810-132.757 144.915 1.00117.75 N
ATOM 21 C2 A A 64 -14.253-132.173 145.990 1.00112.24 C
ATOM 22 N3 A A 64 -14.308-130.902 146.384 1.00113.07 N
ATOM 23 C4 A A 64 -15.037-130.166 145.523 1.00117.50 C
ATOM 24 P G A 65 -14.731-123.499 147.322 1.00123.64 P
ATOM 25 OP1 G A 65 -15.109-122.100 147.001 1.00119.87 O
ATOM 26 OP2 G A 65 -13.544-124.085 146.645 1.00128.06 O
ATOM 27 O5' G A 65 -14.503-123.609 148.905 1.00123.84 O
TER

ATOM 1 O3' G B 105 -14.024-132.251 136.856 1.00101.74 O
ATOM 2 P U B 106 -15.137-132.108 138.010 1.00 93.57 P
ATOM 3 OP1 U B 106 -16.415-132.556 137.412 1.00 94.90 O
ATOM 4 OP2 U B 106 -15.037-130.750 138.609 1.00 88.41 O
ATOM 5 O5' U B 106 -14.685-133.157 139.124 1.00104.61 O
ATOM 6 C5' U B 106 -14.096-134.405 138.746 1.00110.86 C
ATOM 7 C4' U B 106 -13.234-134.963 139.864 1.00110.92 C
ATOM 8 O4' U B 106 -12.223-134.000 140.253 1.00105.64 O
ATOM 9 C3' U B 106 -13.937-135.339 141.160 1.00111.65 C
ATOM 10 O3' U B 106 -14.467-136.661 141.057 1.00116.97 O
ATOM 11 C2' U B 106 -12.809-135.278 142.186 1.00104.90 C
ATOM 12 O2' U B 106 -12.080-136.480 142.245 1.00105.08 O
ATOM 13 C1' U B 106 -11.909-134.173 141.621 1.00102.28 C
ATOM 14 N1 U B 106 -12.044-132.883 142.314 1.00 98.09 N
ATOM 15 C2 U B 106 -11.723-132.842 143.663 1.00104.31 C
ATOM 16 O2 U B 106 -11.364-133.829 144.295 1.00108.70 O
ATOM 17 N3 U B 106 -11.848-131.608 144.248 1.00103.92 N
ATOM 18 C4 U B 106 -12.258-130.444 143.645 1.00100.86 C
ATOM 19 O4 U B 106 -12.301-129.409 144.308 1.00102.97 O
ATOM 20 C5 U B 106 -12.585-130.570 142.258 1.00 99.51 C
ATOM 21 C6 U B 106 -12.469-131.752 141.656 1.00 98.97 C
ATOM 22 P C B 107 -15.931-136.991 141.640 1.00122.49 P
ATOM 23 OP1 C B 107 -16.453-138.165 140.883 1.00111.43 O
ATOM 24 OP2 C B 107 -16.700-135.709 141.645 1.00119.25 O
ATOM 25 O5' C B 107 -15.656-137.432 143.152 1.00117.29 O
TER

Atoms:
OP1: (-19.255,-126.451,144.414)
OP2: (-19.164,-129.012,144.236)
C3': (-15.986,-125.797,146.655)
C1': (-15.075,-127.990,146.796)
C5': (-18.282,-126.796,147.255)
O4': (-16.245,-127.979,147.581)
C8: (-16.083,-128.530,144.504)
O2': (-13.717,-126.212,147.583)
C6: (-15.544,-131.992,144.071)
C5: (-15.658,-130.614,144.368)
C4: (-15.037,-130.166,145.523)
P: (-19.401,-127.785,145.044)
C4': (-16.817,-126.648,147.613)
C2': (-14.644,-126.538,146.572)
C2: (-14.253,-132.173,145.990)
N1: (-14.810,-132.757,144.915)
N3: (-14.308,-130.902,146.384)
N6: (-16.137,-132.579,143.019)
N7: (-16.304,-129.564,143.726)
N9: (-15.365,-128.833,145.635)
O5': (-18.459,-127.885,146.335)
O3': (-16.051,-124.410,147.096)
C4: (-12.258,-130.444,143.645)
N3: (-11.848,-131.608,144.248)
OP1: (-16.415,-132.556,137.412)
OP2: (-15.037,-130.750,138.609)
C2: (-11.723,-132.842,143.663)
C1': (-11.909,-134.173,141.621)
C3': (-13.937,-135.339,141.160)
O5': (-14.685,-133.157,139.124)
O4': (-12.223,-134.000,140.253)
C5': (-14.096,-134.405,138.746)
P: (-15.137,-132.108,138.010)
C4': (-13.234,-134.963,139.864)
C2': (-12.809,-135.278,142.186)
O2': (-12.080,-136.480,142.245)
N1: (-12.044,-132.883,142.314)
O4: (-12.301,-129.409,144.308)
O2: (-11.364,-133.829,144.295)
C6: (-12.469,-131.752,141.656)
C5: (-12.585,-130.570,142.258)
O3': (-14.467,-136.661,141.057)
Image (generated by PyMOL):
PyMOL image
show in jmol